1. [GERM-09] Cécile Germain-Renaud, Vincent Breton, Patrick Clarysse, Bertrand Delhay, Yann Gaudeau, Tristan Glatard, Emmanuel Jeannot, Yannick Legré, Johan Montagnat, Jean Marie Moureaux, Angel Osorio, Xavier Pennec, Joël Schaerer, and Romain Texier. Grid Analysis of Radiological Data. In Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare, chapter XIX. Mario Cannataro, editor. IGI, 2009.

1. [BABO-08a] L. Baboi. Méthodologie pour l'IRM abdominale du petit animal à champ magnétique élevé : Application à la caractérisation de lésions hépatiques sur un modèle murin de tumeurs endocrines. Doctorat, Université Claude-Bernard Lyon I, 2008. Jury: Aubé C. (rap.), Beuf O. (dir.), Cozar O., Lartizien C. (co-dir.), Pilleul F., Saint-Jalmes H. (rap.), Scoazec J.Y. (prés.), Volk A.



2. [BOLB-06] R. Bolbos. Mesures morphologiques du cartilage par IRM à haute résolution spatiale in vivo : validation et développements méthodologiques sur le petit animal. Doctorat, Université Claude-Bernard Lyon I, 2006. Jury: O. Beuf (co-dir.), Jean-Luc Drap/'e (rap.), Pierre Gillet (rap.), Marc Janier (dir.), Philippe Pastoureau, Eric Vignon (prés.).



3. [PERR-06d] A.L. Perrier. Conception et réalisation d'adaptateurs d'impédances et de diviseurs de puissance miniatures et accordables par varactors. Doctorat, Université de Savoie, 2006. Jury: J.M. Duchamp (co-dir.), P. Ferrari (dir.), G. Dambrine (prés.), C. Grava, S. Toutain (rap.), T. Parra (rap.), J.L. Coutaz et D. Vincent.



4. [ARME-05] C. Armenean. Etude de la sécurité de dispositifs endoluminaux en IRM. Doctorat, Université Claude Bernard Lyon 1, 2005. Jury: J. Felblinger (rap.), A. Leroy-Willig (rap.), J.F. Delforge, D. Barbier (prés.), H. Saint-James (dir.), E. Perrin (co-dir.).



5. [PILL-05e] F. Pilleul. Imagerie RMN endoluminale de la paroi digestive : du développement de l'instrument à son application in vivo. Doctorat, Université Claude-Bernard Lyon I, 2005. Jury: Olivier Beuf (co-dir.), Patrice Bret (rap.), Anne Leroy-Willig (rap.), Serge Piranda, Didier Revel (prés.), Hervé Saint-Jalmes (dir.), Pierre-Jean Valette.



6. [POUP-99] F. Poupon. Parcellisation systématique du cerveau en volume d'intérêt. Le cas des structures profondes. Doctorat, INSA Lyon, 1999. Jury: Magnin I.E. (dir.), Coatrieux J.L. (prés.), Ayache N.(rap.), Magnin G., Bertrand B., Habson D. et Mangin J.F.

1. [BABO-10] L. Baboi, F. Pilleul, L. Milot, C. Lartizien, C. Roche, G. Poncet, J.Y. Scoazec, and O. Beuf. MRI follow-up of liver growth of neuro-endocrine tumors in an experimental mouse model. Magn Reson Imaging, 28(2):264-272, 2010.



2. [BRIS-10a] J.C. Brisset, V. Desestret, E. Devillard, S. Marcellino, F. Chauveau, F. Lagarde, S. Nataf, J. Honnorat, N. Nighoghossian, Y. Berthezène, and M. Wiart. Quantitative effects of cell internalization of two types of ultrasmall superparamagnetic iron oxide nanoparticles at 4.7T and 7T. Eur Radiol, 20(2):275-285, 2010.



3. [BRIS-10b] J.C. Brisset, M. Sigovan, F. Chauveau, A. Riou, E. Devillard, V. Desestret, M. Touret, S. Nataf, J. Honnorat, E. Canet-soulas, N. Nighoghossian, Y. Berthezène, and M. Wiart. Quantification of iron-labeled cells with positive contrast in mouse brains. Molecular Imaging and Biology, pp in press, 2010.



4. [BROC-10] KK. Brock, Deformable Registration Accuracy Consortium, V. Boldea, and D. Sarrut. Results of a Multi-Institution Deformable Registration Accuracy Study (MIDRAS). Int J Radiat Onc, 76(2):583-596, February 2010.



5. [CLAR-10a] P. Clarysse, B. Delhay, M. Picq, and J. Pousin. Optimal extended optical flow subject to a statistical constraint. J Comput Appl Math, 234:1291-1302, 2010.



6. [CLAR-10b] Patrick Clarysse, Martine Picq, and Jérôme Pousin. Optimal extended optical flow and statistical constraints: A result of convergence. J Comput Appl Math, -(-):in press, 2010.



7. [DUCR-10] N. Ducros, A. Da Silva, J.M. Dinten, C.S Seelamantula, M Unser, and F. Peyrin. A Time-domain wavelet-based approach for fluorescence diffuse optical tomography. Med Phys, 37(6):2890-2900, 2010.



8. [FEI-10] Jia Fei, Francoise Peyrin, Luc Malaval, Laurence Vico, and Marie-Helene Lafage-Proust. Imaging and Quantitative Assessment of Long Bone Vascularization in the Adult Rat using Microcomputed Tomography. Anat Rec, 293(2):215-224, 2010.



9. [GOEB-10] J-C. Goebel, R. Bolbos, M. Pham, L. Galois, A. Rengle, D. Loeuille, P. Netter, P. Gillet, O. Beuf, and A. Pinzano-Watrin. In vivo high resolution MRI (7T) of femoro-tibial cartilage changes in the rat anterior cruciate ligament transection model of osteoarthritis: a cross sectional study. Rheumatology, 49(9):1654-1664, May 2010.



10. [GREV-10] L. Grevillot, T. Frisson, N. Zahra, D. Bertrand, F. Stichelbaut, N. Freud, and D. Sarrut. Optimization of GEANT4 settings for Proton Pencil Beam Scanning simulations using GATE. Nucl Instr Meth Phys Res B, to appear, 2010.



11. [MUTE-10] E. Mutel, A. Abdul-Wahed, N. Ramamonjisoa, A. Stefanutti, I. Houberdon, S. Cavassila, F. Pilleul, O. Beuf, A. Gautier-Stein, A. Penhoat, G. Mithieux, and F. Rajas. Targeted deletion of liver glucose-6 phosphatase mimics glycogen storage disease type 1a including development of multiple adenomas. J Hepatol, pp in-press, 2010.



12. [RUPI-10] F. Rupin, D. Bossis, L. Vico, F. Peyrin, K. Raum, and P. Laugier. Adaptive remodeling of trabecular bone core cultured in 3D bioreactor providing cyclic loading: an acoustic microscopy study. Ultrasound Med Biol, 36(6):999-1007, 2010.



13. [SANS-10] V. Sansalone, S. Naili, V. Bousson, C. Bergot, F. Peyrin, J. Zarka, J.D. Laredo, and G. Haiat. Determination of the heterogeneous anisotropic elastic properties of human femoral bone: from nanoscopic to organ scale. J Biomech, pp in-press, 2010.



14. [SARR-10] D. Sarrut and J. Vandemeulebroucke. B-LUT: Fast and low memory B-spline image interpolation. Comput Meth Prog Bio, 99(2):172-178, August 2010.



15. [SCHA-10] Joël Schaerer, Christopher Casta, Jérôme Pousin, and Patrick Clarysse. A dynamic elastic model for segmentation and tracking of the heart in MR image sequences. Med Image Anal, 14(6):738-749, 2010.



16. [VAN-10] J. Vandemeulebroucke, S. Rit, J. Kybic, P. Clarysse, and D. Sarrut. Spatio-Temporal Motion Estimation for Respiratory-Correlated Imaging of the Lungs. Med Phys, to appear, 2010.



17. [ZAHR-10] N. Zahra, T. Frisson, L. Grevillot, P. Lautesse, and D. Sarrut. Influence of Geant4 parameters on dose distribution and computation time for carbon ion therapy simulation. Physica Medica: European Journal of Medical Physics, 26(4):202-206, October 2010.



18. [BOUT-09a] J. Boutet, M. Debourdeau, L. Hervé, L. Guyon, L. Saroul, D. Vray, and J.M. Dinten. A bi-modal ultrasound and fluorescence approach for prostate cancer diagnosis. Journal of Biomedical Optics, 14:064001-064007, 2009.



19. [CARR-09b] C. Carrie, J. Grill, D. Figarella-Branger, V. Bernier, L. Padovani, J. Louis Habrand, M. Benhassel, M. Mege, M. Mahe, P. Quetin, J.P. Maire, M.H. Baron, P. Clavere, S. Chapet, P. Maingon, C. Alapetite, L. Claude, A. Laprie, and S. Dussart. Online Quality Control, Hyperfractionated Radiotherapy Alone and Reduced Boost Volume for Standard Risk Medulloblastoma: Long-Term Results of MSFOP 98. J Clin Oncol, pp (in-press), 2009.



20. [CONT-09d] C. Conter, C. Carrie, V. Bernier, A. Geoffray, A. Pagnier, JC Gentet, A Lellouch-Tubiana, S. Chabaud, and D. Frappaz. Intracranial Ependymomas in Children: Society of Pediatric Oncology Experience with Postoperative Hyperfractionated Local Radiotherapy. Int J Radiat Oncol Biol Phys, pp (in-press), 2009.



21. [GUIO-09] F. De Guio, M. Musse, H. Benoit-Cattin, T. Lucas, and A. Davenel. Magnetic resonance imaging method based on magnetic susceptibility effects to estimate bubble size in alveolar products: Application to bread dough during proving. Magn Reson Med, 27:577-585, 2009.



22. [DESE-09a] V. Desestret, J.C. Brisset, E. Devillard, S. Moucharrafie, S. Nataf, J. Honnorat, N. Nighoghossian, Y. Berthezène, and M. Wiart. Early stage investigations of USPIO-induced signal changes after focal cerebral ischemia in mice. Stroke, 40:1834-1841, 2009.



23. [DUCR-09e] Nicolas Ducros, Anabela Da Silva, Lionel Herve, Jean-Marc Dinten, and Francoise Peyrin. A comprehensive study of the use of temporal moments in time-resolved diffuse optical tomography: part II. Three-dimensional reconstructions. Phys Med Biol, 54(23):7107-7119, DEC 7 2009.



24. [DUCR-09d] Nicolas Ducros, Lionel Herve, Anabela Da Silva, Jean-Marc Dinten, and Francoise Peyrin. A comprehensive study of the use of temporal moments in time-resolved diffuse optical tomography: part I. Theoretical material. Phys Med Biol, 54(23):7089-7105, DEC 7 2009.



25. [FRIS-09] T. Frisson, N. Zahra, P. Lautesse, and D. Sarrut. Monte-Carlo based prediction of radiochromic film response for hadrontherapy dosimetry. Nucl Instr Meth Phys Res A, 606(3):749-754, July 2009.



26. [HAIA-09] G. Haiat, F. Padilla, M. Svrcekova, Y. Chevalier, D. Pahr, F. Peyrin, P. Laugier, and P. Zysset. Relationship between ultrasonic parameters and apparent trabecular bone elastic modulus: A numerical approach. J Biomech, 42(13):2033-2039, SEP 18 2009.



27. [LEMA-09] A. Lemaitre, P. Segars, S. Marache, A. Reilhac, M. Hatt, S. Tomei, C. Lartizien, and D. Visvikis. Incorporating patient specific variability in the simulation of realistic whole body 18F-FDG distributions for oncology applications. Proceedings of the IEEE, 97(12):(in-press), 2009.



28. [MAZE-09a] R. Mazeron, B. Etienne Mastroianni, D. Perol, D. Arpin, M. Vincent, L. Falchero, I. Martel Lafay, C. Carrie, and L. Claude. Predictive factors of late radiation fibrosis: a prospective study in non-small cell lung cancer. J Clin Oncol, pp (in-press), 2009.



29. [MEHT-09c] M.P. Mehta, W.R. Shapiro, S.C. Phan, R. Gervais, C. Carrie, P. Chabot, R.A. Patchell, M.J. Glantz, L. Recht, C. Langer, R.K. Sur, W.H. Roa, M.A. Mahe, A. Fortin, C Nieder, C.A. Meyers, J.A. Smith, R.A. Miller, and M.F. Renschler. Motexafin gadolinium combined with prompt whole brain radiotherapy prolongs time to neurologic progression in non-small-cell lung cancer patients with brain metastases: results of a phase III trial. Int J Radiat Oncol Biol Phys, 73(4):1069-76, 2009.



30. [RIT-09] S. Rit, D. Sarrut, and L. Desbat. Comparison of Analytic and Algebraic Methods for Motion-Compensated Cone-Beam CT Reconstruction of the Thorax. IEEE Trans Med Imaging, 28(10):1513-1525, 2009.



31. [RUPI-09] F. Rupin, A. Saied, D. Dalmas, F. Peyrin, S. Haupert, K. Raum, E. Barthel, G. Boivin, and P. Laugier. Assessment of Microelastic Properties of Bone Using Scanning Acoustic Microscopy: A Face-to-Face Comparison with Nanoindentation. Jpn J Appl Phys, 48(7, Part 2 Sp. Iss. SI):1-6, 2009.



32. [SOUC-09] R. Souchon, R. Salomir, J.Y. Chapelon, O. Beuf, and O. Rouvière. Élastographie transitoire par résonance magnétique. IRBM, 30:168-170, 2009.



33. [VALE-09] S. Valette, R. Chaine, and R. Prost. Progressive Lossless Mesh Compression Via Incremental Parametric Refinement. Computer Graphics Forum (Proceedings of Symposium on Geometry Processing 2009), (5):1301-1310, July 2009.



34. [ABDU-08] S. Abdullah, J.B. Pialat, M. Wiart, F. Duboeuf, J.Y. Mabrut, B. Bancel, A. Rode, C. Ducerf, J. Baulieux, and Y. Berthezène. Characterization of hepatocellular carcinoma and colorectal liver metastasis by means of perfusion MRI. J Magn Reson Imaging, 28(2):544-546, 2008.



35. [BOUS-08b] L. Boussel, G. Herigault, M. Sigovan, R. Loffroy, E. Canet-Soulas, and P. Douek. Modified EKG-triggered black-blood turbo spin-echo technique to improve T1-weighting in contrast-enhanced MRI of atherosclerotic carotid arteries. J Magn Reson Imaging, 28(2):533-537, 2008.



36. [CANA-08] L. Canaple, O. Beuf, M. Armenean, J. Hasserodt, J. Samarut, and M. Janier. Fast screening of paramagnetic molecules in zebrafish embryos by MRI. Nuclear Magnetic Resonance in Biomedicine, 21(2):129-37, 2008.



37. [CARR-08] C. Carrie and P. Thomas. The Pediatric Radiation Oncology Society (PROS): why?. Int J Radiat Oncol Biol Phys, 71(13):666, 2008.



38. [GUIO-08] F. De Guio, H. Benoit-Cattin, and A. Davenel. Signal decay due to susceptibility-induced intravoxel dephasing on multiple air-filled cylinders: MRI simulations and experiments. Magma, 21:261-271, 2008.



39. [HAIA-08] G. Haiat, F. Padilla, F. Peyrin, and P. Laugier. Fast wave ultrasonic propagation in trabecular bone: Numerical study of the influence of porosity and structural anisotropy. J Acoust Soc Am, 123(3):1694-1705, 2008.



40. [NAVA-08] L. Navarro, G. Courbebaisse, and J.C. Pinoli. Continuous frequency and phase spectrograms : A study of their 2D and 3D capabilities. Application to musical signal analysis. Journal of Zhejiang University SCIENCE A, 9(2):199-206, 2008.



41. [NIGH-08a] N. Nighoghossian, M. Wiart, and Y Berthezène. Novel Applications of Magnetic Resonance Imaging to Image Tissue Inflammation after Stroke. J Neuroimaging, 28(2):390-395, 2008.



42. [PADI-08] F. Padilla, F. Jenson, V. Bousson, F. Peyrin, and P. Laugier. Relationships of trabecular bone structure with quantitative ultrasound parameters: in vitro study on human proximal femur using transmission and backscatter measurements. Bone, 42(6):1193-202, June 2008.



43. [SOUC-08] R. Souchon, R. Salomir, O. Beuf, L. Milot, D. Grenier, D. Lyonnet, J.Y. Chapelon, and O. Rouvière. Transient MR Elastography (t-MRE) using ultrasound radiation force: theory, safety, and initial experiments in vitro. Magn Reson Med, 60(4):871-881, 2008.



44. [STAV-08] V. Stavila, M. Allali, L. Canaple, Y. Stortz, C. Franc, P. Maurin, O. Beuf, O. Dufay, J. Samarut, M. Janier, and J. Hasserodt. Significant relaxivity gap between a low-spin and a high-spin iron (II) complex of structural similarity: an attractive off-on system for the potential design of responsive MRI probes. New J Chem, 32:428-435, 2008.



45. [ALSA-07g] H. Alsaid, M. Sabbah, Z. Bendahmane, O. Fokapu, J. Felblinger, C. Desbleds-Mansard, C. Corot, A. Briguet, Y. Crémillieux, and E. Canet-Soulas. High-Resolution MRI with real time digital Cardiac and Respiratory Gating in Mice. Nuclear Magnetic Resonance in Biomedicine, 58(6):1157-1163, 2007.



46. [BOSS-07] E. Bossy, P. Laugier, F. Peyrin, and F. Padilla. Attenuation in trabecular bone: A comparison between numerical simulation and experimental results in human femur. J Acoust Soc Am, 122(4):2469-2475, 2007.



47. [CANE-08b] E. Canet-Soulas and D. Letourneur. Biomarkers of atherosclerosis and the potential of MRI for the diagnosis of vulnerable plaque. Magn Reson Mater Phy Biol Med, 20:129-142, 2007.



48. [CANE-07d] F. Chaubet, I. Bertholon, J.M. Serfaty, R. Bazeli, H. Alsaid, M. Jandrot-Perrus, C. Zahir, P. Even, L. Bachelet, Z. Touat, E. Lancelot, C. Corot, and E. Canet-Soulas. A new macromolecular paramagnetic MR contrast agent binds to activated human platelets. Contrast Media Mol Imaging, 2:178-188, 2007.



49. [CHO-07a] T.H. Cho, N. Nighoghossian, M. Wiart, V. Desestret, S. Cakmak, Y. Berthezène, L. Derex, G. Louis-Tisserand, P. Trouillas, J. Honnorat, J.C. Froment, and M. Hermier. USPIO-enhanced MRI of neuroinflammation at the sub-acute stage of ischemic stroke, preliminary data. Cerebrovasc Dis, 24(6):544-546, 2007.



50. [DELP-07a] P. Delpierre, S. Basolo, J.F. Berar, A. Bonissent, P. Breugnon, N. Boudet, B. Caillot, B. Chantepie, J.C. Clemens, F. Debarbieux, B. Dinkespiler, R. Khouri, I. Koudobine, V. Mararazzo, C. Meessen, M. Menouni, C. Morel, C. Mouget, P. Pangaud, F. Peyrin, G. Rougon, D. Sappey-Marinier, S. Valton, and E. Vigeolas. PIXSCAN: Pixel Detector CT-Scanner for Small Animal Imaging. Nucl Instr Meth Phys Res A, 571:425-428, 2007.



51. [DESB-07] A. Desbrée, L. Rbah, J.B. Langlois, D. Grenier, R. Mastrippolito, F. Pain, L. Pinot, P. Lanièce, L. Zimmer, and H. Gurden. Simultaneous in vivo Magnetic Resonance Imaging and Radioactive Measurements by the B-MicroProbe. Eur J Nucl Med Mol Imaging, 34(11):1868-72, November 2007.



52. [FOLL-07] H. Follet, F. Peyrin, E. Vidal-Salle, A. Bonnassie, C. Rumelhart, and P.J. Meunier. Intrinsic mechanical properties of trabecular calcaneus determined by finite-element models using 3D synchrotron microtomography. J Biomech, 40(10):(2174-2183), 2007.



53. [HAIA-07] G. Haiat, F. Padilla, F. Peyrin, and P. Laugier. Variation of ultrasonic parameters with microstructure and material properties of trabecular bone: a three-dimensional model simulation. J Bone Min Research, 22(5):665-674, 2007.



54. [LAMB-07] F. Lamberton, N. Delcroix, D. Grenier, B. Mazoyer, and M. Joliot. A new EPI-based dynamic field mapping method: Application to retrospective geometrical distortion corrections. J Magn Reson Imaging, 26(3):747-755, August 2007.



55. [NIGH-07a] N. Nighoghossian, M. Wiart, S. Cakmak, Y. Berthezène, L. Derex, T.H. Cho, C. Nemoz, F. Chappuis, J.L. Tisserand, J.B. Pialat, P. Trouillas, J.C. Froment, and M. Hermier. Inflammatory response after ischemic stroke: a USPIO-enhanced MRI study in patients. Stroke, 38(2):303-307, 2007.



56. [ROUC-07] Y. Rouchdy, J. Pousin, J. Schaerer, and P. Clarysse. A nonlinear elastic deformable template for soft structure segmentation: application to the heart segmentation in MRI. Inverse Problems, 23:1017-1035, 2007.



57. [SARR-07] D. Sarrut, B. Delhay, P.F. Villard, V. Boldea, M. Beuve, and P. Clarysse. A comparison framework for breathing motion estimation methods from 4D imaging. IEEE Trans Med Imaging, 26(12):1636-1648, 2007.



58. [VALT-07a] S. Valton, F. Peyrin, P. Delpierre, F. Debarbieux, A. Bonissent, R. Khoury, C. Meessen, C. Morel, and D. Sappey-Marinier. Evaluation of tomographic reconstruction methods for small animal microCT and microPET/CT. Nucl Instr Meth Phys Res A, 571:278-281, 2007.



59. [WIAR-07c] M. Wiart, L. Curiel, A. Gelet, D. Lyonnet, J.Y. Chapelon, and O. Rouvière. Influence of perfusion on high-intensity focused ultrasound prostate ablation: a first-pass MRI study. Magn Reson Med, 58(1):119-127, 2007.



60. [WIAR-07b] M. Wiart, N. Davoust, V. Desestret, N. Nighoghossian, and Y. Berthezène. Response to Letter by Bendszus, Kleinschnitz and Stoll: Iron-enhanced MRI in ischemic stroke: intravascular trapping vs cellular imaging. Stroke, 38:13, 2007.



61. [WIAR-07a] M. Wiart, N. Davoust, J.B. Pialat, V. Desestret, S. Moucharrafie, T.H. Cho, M. Mutin, J.B. Langlois, O. Beuf, J. Honnorat, N. Nighoghossian, and Y. Berthezène. MRI monitoring of neuro-inflammation in mouse focal ischemia. Stroke, 38(1):131-137, 2007.



62. [APOS-06] L. Apostol, V. Boudousq, O. Basset, C. Odet, S. Yot, J. Tabary, J.M. Dinten, E. Boller, P. O. Kotzki, and F. Peyrin. Relevance of 2D radiographic texture analysis for the assessment of 3D bone micro-architecture. Med Phys, 33(9):3546-3556, 2006.



63. [ATOU-06] H. Atoui, S. Miguet, and D. Sarrut. A Fast Morphing-Based Interpolation For Medical Images: Application To Conformal Radiotherapy. Image Anal Stereol, 25(2):95-103, June 2006.



64. [BOUS-06a] L. Boussel, G. Herigault, A. De La Vega, M. Nonent, P. Douek, and J.M. Serfaty. Swallowing, arterial pulsation, and breathing induce motion artifacts in carotid artery MRI. J Magn Reson Imaging, 23(3):413-415, 2006.



65. [CHAP-06a] C. Chappard, A. Basillais, C.L. Benhamou, A. Bonnassie, B. Brunet-Imbault, N. Bonnet, and F. Peyrin. Comparison of synchrotron radiation and conventional X-ray microcomputed tomography for assessing trabecular bone microarchitecture of human femoral heads. Med Phys, 33(9):3568-3577, 2006.



66. [CHAP-06b] C. Chappard, F. Peyrin, A. Bonnassie, G. Lemineur, B. Brunet-Imbault, E. Lespessailles, and C.L. Benhamou. Subchondral Bone Micro-Architectural Changes In Osteoarthritis : a Synchrotron Micro-Computed Tomography Study. Osteoarthritis Cartilage, 14(3):215-223, 2006.



67. [GUIG-06] L. Guigues, J.P. Cocquerez, and H. Le Men. Scale-Sets Image Analysis. Int J Computer Vision, 68(3):289-317, July 2006.



68. [JULI-06a] C. Julien, A. Bradu, R. Sablong, E. Grillon, C. Remy, J. Derouard, and J.F. Payen. Measuring hemoglobin oxygen saturation during graded hypoxic hypoxia in rat striatum. Anesth Analg, 102(2):565-570, 2006.



69. [LI-06] X.L. Li, J. Yang, K. Xie, and Y.M. Zhu. High Quality Rendering with Depth Cueing of Volumetric Data Using Monte Carlo Integration. Comput Biol Med, 36(9):1014-1025, 2006.



70. [NIGH-06a] N. Nighoghossian, L. L. Zeng, L. Derex, S. Cakmak, and P. Trouillas. Warning Compulsive Behaviour Preceding Acute Ischemic Stroke. Eur Neurol, 56(1):340-347, 2006.



71. [PHIL-06] S. Philip Foliguet and L. Guigues. Evaluation de la Segmentation d'Images : Etat de l'Art, Nouveaux Indices et Comparaison. Traitement du Signal, 23(2):109-124, 2006.



72. [RIT-06] S. Rit, D. Sarrut, V. Boldea, and C. Ginestet. Extraction du signal respiratoire à partir de projections cone-beam pour l'imagerie TDM 4D. Traitement du Signal, 23(3-4):307-319, 2006.



73. [SARR-06c] D. Sarrut. Deformable Registration for Image-Guided Radiation Therapy. Zeitschrift für Medizinische Physik, 16:285-297, December 2006.



74. [SARR-06a] D. Sarrut, V. Boldea, S. Miguet, and C. Ginestet. Simulation of 4D CT images from deformable registration between inhale and exhale breath-hold CT scans. Med Phys, 33(3):605-617, 2006.



75. [SARR-06b] D. Sarrut, D. Perol, P. Pommier, and C. Carrie. Radiothérapie avec blocage respiratoire pour les grands insuffisants respiratoires atteints d'un carcinome pulmonaire non à petites cellules (Protocole RESPI 2000) : application à la modélisation des déformations d'organes par recalage déformable. Cancer/radiothérapie Elsevier, 10(6-7):377-380, 2006.



76. [WIAR-06b] M. Wiart, N. Davoust, J.B. Pialat, V. Desestret, S. Moucharrafie, T.H. Cho, M. Mutin, J.B. Langlois, O. Beuf, J. Honnorat, N. Nighoghossian, and Y. Berthezène. CMR 2005: MRI of cerebral ischemia with ultra-small superparamagnetic particles of iron oxide in mice. Contrast Media Mol Imaging, 1(2):55-56, 2006.



77. [BAYA-05] S. Bayat, L. Apostol, E. Boller, T. Brochard, and F. Peyrin. In vivo imaging of bone micro-architecture in mice with 3D synchrotron radiation microtomography. Nucl Instr Meth Phys Res A, 548:247-252, 2005.



78. [BENO-05] H. Benoit-Cattin, G. Collewet, B. Belaroussi, H. Saint-Jalmes, and C. Odet. The SIMRI project : a versatile and interactive MRI simulator. J Magn Reson Imaging, 173:97-115, 2005.



79. [BLUM-05] A. Blum, A. Bello, F. Guillemin, P. Douek, M.C. Laprévotte-Heully, and D. Wahl. GENEPI study group :Performance of magnetic resonance angiography in suspected acute pulmonary embolism. Thromb Haemos, 93:1-9, 2005.



80. [COTT-05b] F. Cotton, T. Euvrard, F. Durand-Dubief, C. Pachai, M. Cucherat, F. Ramirez Rozzi, A. Bonmartin, A.M. Guihard-Costa, V.A. Tran Minh, B. Vallée, and J.C. Froment. Evolution de la voûte crânienne et du parenchyme cérébral avec l'âge : étude préliminaire en IRM. J Neuroradiol, 31:131-137, 2005.



81. [COUR-05] G. Courbebaisse. Numerical simulation of injection molding process and the pre-modelling concept. Comp Mater Sci, 34(4):397-405, 2005.



82. [DESB-05a] A. Desbrée, F. Pain, H. Gurden, L. Pinot, D. Grenier, L. Zimmer, R. Mastrippolito, and P. Lanièce. A new multimodality system for quantitative in vivo studies in small animals: combination of nuclear magnetic resonance and the radiosensitive beta-MicroProbe. IEEE Trans Nucl Sci, 52(5):1281-1287, 2005.



83. [FOLL-05] H. Follet, K. Bruyère-Garnier, F. Peyrin, J.P. Roux, M.E. Arlot, B. Burt-Pichat, C. Rumelhart, and P.J. Meunier. Relationship between compressive properties of human os calcis and microarchitecture assessed from 2D and 3D synchrotron microtomography. Bone, pp 340-351, 2005.



84. [GERM-05] C. Germain, V. Breton, P. Clarysse, Y. Gaudeau, T. Glatard, E. Jeannot, Y. Legre, C. Loomis, I.E. Magnin, J. Montagnat, J.M. Moureau, A. Osorio, X. Pennec, and R. Texier. Grid-enabling medical image analysis. J Clin Monit Comput, 19(4-5):339-349, 2005.



85. [LAST-05] D. Last, F. Peyrin, and G. Guillot. Accuracy of 3D MR microscopy for trabecular bone assessment: a comparative study on calcaneus samples using 3D synchrotron radiation microtomography. Magma, pp 1352-8661, 2005.



86. [LAUG-05] P. Laugier, F. Padilla, F. Peyrin, K. Raum, A. Saied, M. Talmant, and L. Vico. Apport des ultrasons dans l'exploration du tissu osseux. Innov Tech Biol Med - RBM, 26(5-6):299-311, 2005.



87. [PERR-05a] E. Perrin, R. Harba, I. Iribarren, and R. Jennane. Piecewise fractional Brownian motion. IEEE Trans Signal Proc, 53(3):1211-1215, 2005.



88. [PEYR-05c] F. Peyrin, G. Boivin, and P. Braillon. Bone microarchitecture in human foetuses. Clinical Cases in Mineral and Bone Metabolism, 2(2):150-157, 2005.



89. [PIAL-05] J.B. Pialat, M. Wiart, N. Nighoghossian, P. Adeleine, L. Derex, M. Hermier, J.C. Froment, and Y. Berthezène. Evolution of Lesion Volume in Acute Stroke Treated by Intravenous t-PA. J Magn Reson Imaging, 22:23-28, 2005.



90. [BALA-04] S. Balac, H. Benoit-Cattin, T. Lamotte, and C. Odet. Analytic solution to boundary integral computation of susceptibility induced magnetic field inhomogeneities. Math Comput Model, 39:437-455, 2004.



91. [BARB-04] R. Barbier, Y. Declais, C. Dujardin, N. Garnier, M. Janier, I.A. Kamenskikh, G. Largeron, J. Marteau, C. Pedrini, and D. Sappey-Marinier. Two-head small animal PET prototype with LSO/LuAP coupled to a multi-anode PMT. Nucl Instr Meth Phys Res A, 527:175-179, 2004.



92. [BOSS-04a] E. Bossy, M. Talmant, F. Peyrin, L. Akrout, P. Cloetens, and P. Laugier. An In Vitro Study of the Ultrasonic Axial Transmission Technique at the Radius: 1-MHz Velocity Measurements Are Sensitive to Both Mineralization and Intracortical Porosity. J Bone Min Research, 19(9):1548-1556, 2004.



93. [BOUS-04] V. Bousson, F. Peyrin, C. Bergot, M. Hausard, A. Sautet, and J.D. Laredo. Cortical bone of the human femoral neck : three-dimensional appearance and porosity using synchrotron radiation. J Bone Min Research, 19(5):794-801, 2004.



94. [CHOE-04a] L. Choel, D. Last, F. Duboeuf, M. J. Seurin, M. Lissac, A. Briguet, and G. Guillot. Trabecular alveolar bone microarchitecture in the human mandible using high resolution magnetic resonance imaging. Dentomaxillofac Radiol, 33(3):177-182, 2004.



95. [CLAR-04] P. Clarysse, F. Frouin, M. Garreau, A. Lalande, H. Rousseau, D. Sarrut, and C. Vasseur. Intégration de connaissances et modélisation en imagerie médicale. Innov Tech Biol Med - RBM, 25(3):139-149, 2004.



96. [LACO-04a] D. Lacoste, V. Rossetto, F. Jaillon, and H. Saint-Jalmes. Geometric depolarization in patterns formed by backscattered light. Opt Lett, 29(17):2040-2042, 2004.



97. [MANS-04] C. Mansard, E. Canet-Soulas, A. Anwander, L. Chaabane, B. Neyran, J.M. Serfaty, I.E. Magnin, P. Douek, and M. Orkisz. Quantification of multi-contrast vascular MR Images with the NLSnake, an active contour model : in vitro validation and in vivo evaluation. Magn Reson Med, 51(2):370-379, 2004.



98. [MAUR-04] R.L. Maurice, J. Ohayon, G. Finet, and G. Cloutier. Adapting the Lagrangian speckle model estimator for endovascular elastography : theory and validation with simulated radio frequency data. J Acoust Soc Am, 116(2):1276-1286, 2004.



99. [MONT-05d] J. Montagnat, F. Bellet, H. Benoit-Cattin, V. Breton, L. Brunie, H. Duque, Y. Legre, I.E. Magnin, S. Miguet, J.M. Pierson, L. Seitz, and T. Tweed. Medical images simulation, storage, and processing on the European DataGrid testbed. Journal of Grid Computing, 2(4):387-400, December 2004.



100. [SAPP-04] D. Sappey-Marinier, O. Beuf, C. Billotey, E. Chereul, J. Dupuy, M. Jeandey, D. Grenier, J. Hasserodt, J.B. Langlois, C. Lartizien, W. Mai, C. Odet, J. Samarut, D. Vray, L. Zimmer, and M. Janier. The ANIMAGE project: a multimodal imaging platform for small animal research. Nucl Instr Meth Phys Res A, 527:117-123, 2004.



101. [TUAL-04a] J.M. Tualle, H.L. Nghiem, D. Ettori, R. Sablong, E. Tinet, and S. Avrillier. Asymptotic behavior and inverse problem in layered scattering media. J Opt Soc Am A Opt Image Sci Vis, 21(1):24-34, 2004.



102. [BONN-03a] A. Bonnassie, F. Peyrin, and D. Attali. A new method for analyzing local shape in three-dimensional images based on medial axis transformation. IEEE Trans Sys Man Cyber, 44(4):700-705, 2003.



103. [BRET-03b] V. Breton, R. Medina, and J. Montagnat. DataGrid, Prototype of a Biomedical Grid. Methods Inf Med, 42(2):143-148, 2003.



104. [CHOE-03b] L. Choel, D. Last, M. Lissac, M.J. Seurin, A. Briguet, and G. Guillot. High resolution MRI of fresh mandibular specimens. J Dent Res, 81:296, 2003.



105. [LART-03] C. Lartizien, A. Reilhac, N. Costes, M. Janier, and D. Sappey-Marinier. Monte Carlo simulation-based design of a LSO-LuAP small animal PET system. IEEE Trans Nucl Sci, 50(5):1433-1438, 2003.



106. [MART-03a] E. Martin-Badosa, A. Elmoutaouakkil, S. Nuzzo, D. Amblard, L. Vico, and F. Peyrin. A method for the automatic characterization of bone architecture in 3D mice microtomographic images. Comput Med Imag Grap, 27(6):447-458, 2003.



107. [MONT-03f] J. Montagnat, M. Sermesant, H. Delingette, and N. Ayache. 4D cylindrical echocardiographic images anisotropic filtering for model based segmentation. Pattern Recogn Lett, 24(4-5):815-828, 2003.



108. [PADI-03] F. Padilla, F. Peyrin, and P. Laugier. Prediction of backscatter coefficient in trabecular bone using a numerical model of 3D micro-structure. J Acoust Soc Am, 113(2):1122-1129, 2003.



109. [SOUC-03a] R. Souchon, O. Rouvière, A. Gelet, V. Detti, S. Srinivasan, J. Ophir, and J.Y. Chapelon. Visualisation of HIFU lesions using elastography of the prostate in vivo : preliminary results. Ultrasound Med Biol, 29(7):1007-1015, 2003.



110. [AIT-02] L. Aït Ali, D. Kourtiche, V. Detti, A. Chitnalah, and M. Nadi. Avantage du second harmonique généré par non linéarité ultrasonores en reconstruction d'images tomographiques par diffraction. Innov Tech Biol Med, 23:72-78, 2002.



111. [BELM-02] L. Belmon, H. Benoit-Cattin, A. Baskurt, and J. L. Bougeret. Lossy compression of scientific spacecraft data using wavelets. Application to the CASSINI spacecraft data compression. Astron Astrophys, 386:1143-1152, 2002.



112. [BERT-02] Y. Berthezène, M. Wiart, C. Corot, X. Violas, and E. Canet-Soulas. CT pulmonary angiography and perfusion : an experimental study using blood pool and nonspecific contrast agent. Acad Radiol, 9(S 2:S):359-360, 2002.



113. [CHAF-02] S. Chaffai, F. Peyrin, S. Nuzzo, R. Porcher, G. Berger, and P. Laugier. Ultrasonic characterization of human cancellous bone using transmission and backscatter measurements : relationships to density and micro-structure. Bone, 30(1):229-237, 2002.



114. [CLOE-02] P. Cloetens, W. Ludwig, E. Boller, F. Peyrin, M. Schlenker, and J. Baruchel. 3D imaging using coherent synchrotron radiation. Image Anal Stereol, 21(S1):75, 2002.



115. [COUR-02] G. Courbebaisse and D. Garcia. Shape analysis and injection molding optimization. Comp Mater Sci, 25(4):547-553, 2002.



116. [DARQ-02a] A. Darquie, J.B. Poline, C. Poupon, H. Saint-Jalmes, and D. Le Bihan. Transient decrease in water diffusion observed in human occipital cortex during visual stimulation. Proc Nat Acad Sci U S A, 98(16):9391-9395, 2002.



117. [DETT-02a] V. Detti, D. Kourtiche, and M. Nadi. Acoustical characterization of bone using a cylindrical model and time of flight method. Physiol Meas, 23(1):313-324, 2002.



118. [DETT-02b] V. Detti, D. Kourtiche, and M. Nadi. Rays theory for experimental characterisation of acoustical and dimensional properties of bone diaphysis. Acta Acust, 88(1):199-205, 2002.



119. [JANI-02] M. Janier, A. Mazzadi, M. Lionnet, F. Frouin, X. André-Fouet, L. Cinotti, D. Revel, R. Di Paola, and P. Croisille. Factor analysis of medical image sequences (FAMIS) improves evaluation of myocardial perfusion from first-pass MRI acquisitions. Acad Radiol, 9(1):26-39, 2002.



120. [NUZZ-02b] S. Nuzzo, M.H. Lafage-Proust, E. Martin-Badosa, G. Boivin, T. Thomas, C. Alexandre, and F. Peyrin. Synchrotron radiation microtomography allows the analysis of three-dimensional micro-architecture and degree of mineralization of human Iliac Crest biopsies : effects of Etidronate treatment. J Bone Min Research, 17(8):1372-1382, 2002.



121. [NUZZ-02c] S. Nuzzo, F. Peyrin, P. Cloetens, J. Baruchel, and G. Boivin. Quantification of the degree of mineralization of bone in three dimension using synchrotron radiation microtomography. Med Phys, 19(11):2672-2681, 2002.



122. [ORKI-02a] M. Orkisz, A. Frery, B. Durning, O. Chapet, F. Mornex, and I.E. Magnin. Feasibility of motion estimation and tracking in portal images during treatment of pulmonary cancers by conformal radiotherapy. Image Process Comm, 7(3-4):63-76, 2002.



123. [POMM-02a] P. Pommier, M. Bajard, J.P. Gérard, J. Rémillieux, J. Rochat, X. De Conto, P. Jalade, and D. Sappey-Marinier. ETOILE : projet Rhône-Alpes de centre de traitement par ions carbone des tumeurs radio-résistantes. REE, 4:77-80, 2002.



124. [RENA-02a] L. Renaud, M. Armenean, L. Berry, P. Kleimann, P. Morin, M. Pitaval, J. O'Brien, and H. Saint-Jalmes. Implantable planar rf microcoils for NMR microspectroscopy. Sens Actuators A, 93:244-248, 2002.



125. [REVO-02b] C. Revol-Muller, H. Benoit-Cattin, Y. Carillon, C. Odet, A. Briguet, and F. Peyrin. Bone MRI segmentation assessment based on synchrotron radiation computed microtomography. IEEE Trans Nucl Sci, 49(1):220-224, 2002.



126. [BRUA-01a] J.P. Bruandet, F. Peyrin, and J.M. Dinten. Modélisation physique du bruit dans les images d'atténuation : influence dans un contexte de reconstruction tomographique 3D à partir d'un faible nombre de projections. Revue de la SEE, 2:49-58, 2001.



127. [CHAF-01] S. Chaffai, V. Roberjot, F. Peyrin, G. Berger, and P. Laugier. Variation en fréquence du coefficient de rétrodiffusion ultrasonore de l'os trabéculaire : modélisation théorique et résultats expérimentaux. Innov Tech Biol Med, 22:216-226, 2001.



128. [DELZ-01] T. Delzescaux, F. Frouin, A. De Cesare, S. Philipp-Foliguet, R. Zeboudj, M. Janier, A. Todd-Pokropek, and A. Herment. Adaptive and self-evaluating registration method for myocardial perfusion assessment. Magma, 13(1):28-39, 2001.



129. [GARC-01] D. Garcia, G. Courbebaisse, and M. Jourlin. Image analysis dedicated to polymer injection molding. Image Anal Stereol, 20:1-6, 2001.



130. [GERM-01a] D. Germain, P. Chevallier, A. Laurent, M. Savart, M. Wassef, and H. Saint-Jalmes. MR monitoring of laser-induced lesions of the liver in vivo in a low-field open magnet: temperature mapping and lesion size prediction. J Magn Reson Imaging, 13(1):42-49, 2001.



131. [NUZZ-01a] S. Nuzzo, F. Peyrin, E. Martin-Badosa, M. H. Lafage-Proust, and G. Boivin. Assessment of bone mineral content from 3D Synchrotron radiation microtomography images. IEEE Trans Nucl Sci, 48(3/2):859-863, 2001.



132. [PERR-01] E. Perrin, R. Harba, C. Berzin-Joseph, I. Iribarren, and A. Bonami. Nth-order stationary fractional Brownian motion and fractional Gaussian noises. IEEE Trans Signal Proc, 49(5):1049-1059, 2001.



133. [TRUN-01] F. Trunde, G. Courbebaisse, and M. Jourlin. Logarithmic wavelet transform. Image Anal Stereol, 20:42-47, 2001.



134. [CHAF-00] S. Chaffai, V. Roberjot, F. Peyrin, G. Berger, and P. Laugier. Frequency dependence of ultrasonic backscattering in cancellous bone: autocorrelation model and experimental results. J Acoust Soc Am, 108(5):2403-2411, 2000.



135. [JOUR-00] M. Jourlin, G. Courbebaisse, and D. Garcia. Polymer Molding Simulation: A Mathematical Imaging Approach Based on Propagation of Discrete Distances. Comp Mater Sci, 18(1):19-23, 2000.



136. [PEYR-00a] F. Peyrin, M. Salome-Pateyron, S. Nuzzo, P. Cloetens, A.M. Laval-Jeantet, and J. Baruchel. Perspectives in three-dimensional analysis of bone samples using synchrotron radiation microtomography. Cell Mol Biol, 46(6):1089-1102, 2000.



137. [BENO-99b] H. Benoit-Cattin, A. Baskurt, D. Delamarre, and R. Prost. Compression d'images adaptée à une modalité médicale. Application aux angiographies coronaires pour le stockage sur carte optique. Traitement du Signal, 15:433-443, 1999.



138. [ORKI-99a] M. Orkisz, M. Bourlion, G. Gimenez, and T.A. Flam. Real-time target tracking applied to improve fragmentation of renal stones in extra-corporeal lithotripsy. Mach Vision Appl, 11:138-144, 1999.



139. [SALO-99] M. Salome-Pateyron, F. Peyrin, C. Odet, A.M. Laval-Jeantet, P. Cloetens, B. Baruchel, and P. Spanne. A synchrotron radiation microtomography system for the analysis of trabecular bone samples. Med Phys, 26(10):2194-2204, 1999.



140. [LAUR-98] C. Laurent, F. Peyrin, J.M. Chassery, and M. Amiel. Parallel image reconstruction on MIMD computers for three dimensional cone beam tomography, Special issue on Biomedical Applications. Parallel Computing, 24:1461-1479, 1998.



141. [ORKI-98b] M. Orkisz, T. Farchtchian, M. Bourlion, G. Gimenez, H. Redarce, T. A. Flam, D. Saighi, and B. Debré. Application du traitement d'images au suivi en temps réel de calculs urinaires en lithotritie extra-corporelle. Innov Tech Biol Med, 19 Spe(4):315-323, 1998.



142. [ORKI-98c] M. Orkisz, T. Farchtchian, D. Saighi, M. Bourlion, N. Thiounn, G. Gimenez, B. Debré, and T. A. Flam. Image-based renal stone tracking to improve efficacy in extra-corporeal lithotripsy. J Urol, 160:1237-1240, 1998.



143. [PEYR-98a] F. Peyrin, M. Salomé-Pateyron, P. Cloetens, A.M. Laval-Jeantet, E. Ritman, and P. Ruegsegger. Micro-CT examinations of trabecular bone samples at different resolutions : 14, 7 and 2 micron level. Technol Health Care, 6:391-401, 1998.



144. [RETR-98a] F. Retraint, F. Peyrin, and J.M. Dinten. 3D regularized binary image reconstruction from 2D projections using new randomized ICM algorithm. Int J Imaging Tech, 9:135-146, 1998.



145. [CLOE-97] P. Cloetens, M. Pateyron, J. Y. Buffière, G. Peix, J. Baruchel, F. Peyrin, and M. Schlenker. Observation of microstructure and damage in materials by phase sensitive radiography and tomography. J Appl Phys, 81:5878-5886, 1997.



146. [LAVA-97e] A.M. Laval-Jeantet, A. Elmoutaouakkil, J.P. Roux, G. Lowet, X. Cheng, C. Bergot, and F. Peyrin. Parameters of the vertebral bone structure calculated from standard and HR tomographs. IEEE Eng Med Biol, 8(2):761, 1997.



147. [LAVA-97c] A.M. Laval-Jeantet, A. Elmoutaouakkil, J.P. Roux, G. Lowet, J.P. Houssard, G. Peix, and F. Peyrin. CT and mini-CT 2D-image analysis for the quantification of vertebral trabecular architecture. Stud Health Technol Inform, 40:113-119, 1997.

1. [CANC-10] R. Cancedda, F. Tortelli, R. Tasso, M. Mastrogiacomo, V.S. Komlev, F. Rustichelli, and F. Peyrin. The Development of Tissue-Engineered Bone of Different Origin through Endochondral and Intramembranous Ossification. In Tissue Engineering and Regenerative Medicine International Society, EU Meeting, Galway, Ireland, 2010.



2. [CAST-10] Christopher Casta, Patrick Clarysse, Jérôme Pousin, Joël Schaerer, Pierre Croisille, and Yue-Min Zhu. Incorporating low-level constraints for the retrieval of personalised heart models from dynamic MRI. In Statistical Atlases and Computational Models of the Heart: Mapping Structure and Function (STACOM), MICCAI 2010 Workshop, volume LNCS 6364, pages 174-183, 2010. Springer-Verlag Berlin Heidelberg.



3. [CHAU-10c] F. Chauveau, T.h. Cho, A. Riou, P. Aguettaz, M. Picq, M. Lagarde, Y. Berthezène, N. Nighoghossian, and M. Wiart. MRI evaluation of the neuroprotective effect of a brain-targeting form of docosahexaenoic acid after stroke. In World Molecular Imaging Congress, Kyoto, Japan, 8-10 september 2010.



4. [CHO-10a] T.h. Cho, F. Chauveau, A. Riou, J.B. Langlois, Y. Berthezène, N. Nighoghossian, and M. Wiart. Multiparametric MRI at the acute stage of ischemic stroke: improved subject selection for preclinical trials of neuroprotective drugs. In World Molecular Imaging Congress, Kyoto, Japan, 8-10 september 2010.



5. [DIAS-10] J. Dias, S. Valette, J. Dardenne, R. Prost, and F. Peyrin. Multi-scale analysis of plates and rods in human trabecular bone. In IEEE Int Conf on Image Processing ICIP 2010, Hong Kong, Chine, pages in-press, 2010.



6. [LECO-10a] L. Lecordier, L. Hervé, J.M Dinten, and F. Peyrin. A Finite Volume Method for Fluorescence Diffuse Optical Tomography: Influence on Forward Model and Reconstruction. In Biomed 2010, 2010.



7. [LECO-10c] L. Lecordier, L. Hervé, J.M Dinten, and F. Peyrin. Fluorescence diffuse optical tomography: Influence of the discretization mesh on forward and inverse problems. In World Molecular Imaging Conference, Kyoto, Japan, 2010.



8. [LECO-10b] L. Lecordier, L. Hervé, J.M Dinten, and F. Peyrin. Sparse reconstruction for fluorescence diffuse optical tomography: a FOCUSS-based algorithm with noise regularization. In World Molecular Imaging Conference, Kyoto, Japan, 2010.



9. [MALT-10] T. Mataverne, P. Delachartre, and A. Basarab. Motion estimation using the monogenic signal applied to ultrasound elastography. In IEEE Engineering in Medicine and Biology Society Conference (EMBC 2010), Buenos Aires, Argentina, pages in-press, 2010.



10. [OLLI-10] J. Ollivier, A. Lyshchik, A. Basarab, and P. Delachartre. A 2D least square differentiation filter for tensorial elastography. In IEEE International Ultrasonics Symposium, San Diego, USA, pages in-press, 2010.



11. [PERY-10] E. Pery, L. Hervé, J.M. Dinten, and F. Peyrin. Regularization in fluorescence diffuse optical tomography using prior information on the medium optical properties. In SPIE BiOS 2010, Miami, USA, 2010.



12. [RIOU-10b] A. Riou, F. Chauveau, T.h. Cho, M. Marinescu, S. Nataf, Y. Berthezène, N. Nighoghossian, and M. Wiart. MRI monitoring of intra-arterial delivery of bone marrow-derived macrophages after transient ischemia. In World Molecular Imaging Congress, Kyoto, Japan, 8-10 september 2010.



13. [RIOU-10a] A. Riou, F. Chauveau, T.h. Cho, M. Marinescu, S. Nataf, Y. Berthezène, N. Nighoghossian, and M. Wiart. MRI study of intra-arterial bone marrow-derived macrophage administration after acute focal ischemic stroke in rats. In 5th European Molecular Imaging Meeting, Warsaw, Poland, 26-29 may 2010.



14. [SANS-10b] S. Sansalone, V.and Naili, V. Bousson, C. Bergot, F. Peyrin, J.D Laredo, and Haiat G.. Computing the heterogeneous anisotropic elastic properties of cortical bone by a micromechanical approach. In ECCM 2010, Paris, France, 2010.



15. [BENM-09] F. Benmansour, L.D. Cohen, E.E. Dávila-Serrano, P. Douek, M. Orkisz, and M.A. Zuluaga. New Interactive Methods for Tubular Structure Segmentation on Medical Images. In 12th ISRACAS (Israeli Symposium on Computer-Aided Surgery, Medical Robotics, and Medical Imaging), Tel-Aviv, Israel, pages 10 in CD, May 2009.



16. [BOUT-09b] J. Boutet, L. Saroul, M. Debourdeau, L. Hervé, L. Guyon, J.M. Dinten, P. Peltié, D. Vray, and P. Rizo. Bi-modality imaging of an ultrasound and optical tissue-mimicking phantom for prostate cancer diagnostic. In World Molecular Imaging Congress (WMIC'09), Nice, 10-13 september 2009.



17. [BOUT-09c] J. Boutet, L. Saroul, M. Debourdeau, L. Hervé, L. Guyon, J.M. Dinten, P. Peltié, D. Vray, and P. Rizo. Ultrasound and optical tissue-mimicking phantom for bi-modality imaging of prostate cancer diagnosis. In Biomedical Optics and Imaging (BIOS'09), San Jose, California, 24-29 january 2009.



18. [BRIS-09a] J.C. Brisset, V. Desestret, S. Marcellino, E. Devillard, F. Chauveau, F. Lagarde, S. Nataf, N. Nighoghossian, Y. Berthezène, and M. Wiart. In vivo assessment of the number of iron-labeled cells using T2 quantification. In International Society for Magnetic Resonance in Medicine, Honolulu, Hawaii, USA, 18-24 avril 2009.



19. [CAST-09] J. Casta, P. Clarysse, J. Schaerer, and J. Pousin. Evaluation of the Dynamic Deformable Elastic Template model for the segmentation of the heart in MRI sequences. In Midas Journal: MICCAI Workshop - 3D Segmentation in the Clinic: A Grand Challenge III, London, UK, September 2009.



20. [DUCR-09c] N. Ducros, A. Da Silva, J.M. Dinten, and F. Peyrin. Reconstruction in Fluorescence Diffuse Optical Tomography. In Opt Diag, Paris, France, 2009.



21. [DUCR-09a] N. Ducros, A. da Silva, J.M. Dinten, and F. Peyrin. Impact of the Measurement Model Deviations on Fluorescence Diffuse Optical Tomography. In European Conferences on Biomedical Optics, SPIE, OSA, June 2009.



22. [DUCR-09b] N. Ducros, A. da Silva, J.M. Dinten, and F. Peyrin. Time resolved fluorescence diffuse optical tomography using multi-resolution exponential b-splines. In Biomedical Imaging: From Nano to Macro, 2009. ISBI 2009. 6th IEEE International Symposium, June 2009.



23. [KISS-09] A. Kissi, C. Tilmant, A. De Cesare, A. Comte, L. Najman, A. Lalande, P. Clarysse, M. Garreau, L. Sarry, and F. Frouin. Initiative multicentrique pour une plateforme d'évaluation en imagerie cardiaque. In RITS, Lille, France, March 2009.



24. [KOML-09b] V.S Komlev, M. Mastrogiacomo, F Peyrin, C. Cancedda, and F. Rustichelli. X-Ray Synchrotron Radiation Pseudo-Holotomography as a New Imaging Technique to Investigate Angio- and Microvasculogenesis with No Usage of Contrast Agents. In World Conference on Regenerative Medicine (WRM), Congress Center Leipzig, Germany, 2009.



25. [LANG-09a] M. Langer, R. Prisby, Z. Peter, R. Boistel, M.H. Lafage-Proust, and F. Peyrin. Quantitative Investigation of Bone Microvascularization from 3D Synchrotron Micro-Computed Tomography in a Rat Model. In IEEE Engineering in Medicine and Biology Conference (EMBC), Minneapolis, USA, September 2009.



26. [LART-09c] C. Lartizien, S. Marache, A. Le Pogam, S. Tomei, and D. Visvikis. Impact of Partial Volume Correction in Whole-Body PET Imaging : a Computer-Aided Detection Study. In Proc. of the 2009 IEEE NSS and MIC Conference, Orlando, USA, pages in-press, October 2009.



27. [MACW-09] F. Mac-Way, C. Olivier, N. Laroche, A. Fournier, L. Vico, F. Peyrin, and M.H. Lafage-Proust. Renal osteodystrophy dramatically impairs the degree of bone secondary mineralisation and weakens the trabecular and cortical microarchitecture, two factors of bone fragility : a synchrotron radiation microtomography analysis. In ASBMR 2009, 2009.



28. [MAST-09b] M. Mastrogiacomo, V.S. Komlev, F Peyrin, F Rustichelli, and C. Cancedda. A new imaging technique to investigate angiogenesis and bone regeneration in engineered in vivo implanted scaffolds: X-ray synchrotron radiation pseudo-holotomography. In 12th CCT (Ceramics, Cells and Tissue), Faenza, Italie, 2009.



29. [MAST-09a] M. Mastrogiacomo, V.S. Komlev, F Peyrin, F Rustichelli, and C. Cancedda. X-ray synchrotron radiation pseudo-holotomography as a new imaging technique to investigate angiogenesis and bone regeneration in in vivo implanted engineered scaffolds. In 12th CCT (Ceramics, Cells and Tissue), Faenza, Italie, 2009.



30. [RUPI-09b] F. Rupin, A. Gourrier, K. Raum, F. Peyrin, A. Saied, and P. Laugier. Influence of mineral nanostructural characteristics on cortical bone stiffness assessed by 1GHz-acoustic microscopy, synchrotron radiation $\mu$CT and small angle X-ray scattering. In 34th International Symposium on Ultrasonic Imaging and Tissue Characterization, Arlington, Virginia, 2009.



31. [AMAD-08] A. Amadon and H. Benoit-Cattin. Simulation IRM et transmission parallele. In Congrés du GRAMM, Lyon, France, March 2008.



32. [BRIS-08a] J.C. Brisset, V. Desestret, S. Marcellino, E. Devillard, F. Lagarde, N. Nighoghossian, Y. Berthezène, and M. Wiart. Quantification T1 et T2 des USPIO libres et macrophages marqués en IRM à 4.7T et 7T. In 12ème congrès du GRAMM, Lyon, France, 26-28 mars 2008.



33. [BRIS-08b] J.C. Brisset, V. Desestret, S. Marcellino, E. Devillard, F. Lagarde, N. Nighoghossian, Y. Berthezène, and M. Wiart. T1 and T2 quantification of free USPIO and USPIO-labeled macrophages at 4.7T and 7T. In International Society for Magnetic Resonance in Medicine, Toronto, Ontario, Canada, 3-9 mai 2008.



34. [CHAP-08b] C. Chappard, A. Marchadier, M. Rachidi, CL. Benhamou, and F. Peyrin. Assessment of cortical bone microarchitecture from X-ray synchrotron radiation at different location of human femur. In International Bone Densitometry Workshop, Pugnochioso, Italy, 2008.



35. [CHAP-08a] C. Chappard, F. Peyrin, E. Dolleans, and C.L. Benhamou. Assessment of cortical bone microarchitecture from synchrotron radiation and desktop X-ray micro tomography: a comparative study on human femur. In International Bone Densitometry Workshop, Pugnochioso, Italy, 2008.



36. [DESE-08b] V. Desestret, J.C. Brisset, E. Devillard, S. Moucharrafie, S. Nataf, J. Honnorat, N. Nighoghossian, Y. Berthezène, and M. Wiart. Early stage investigations of USPIO-induced signal changes after focal cerebral ischemia in mice.. In International Society for Magnetic Resonance in Medicine, Toronto, Ontario, Canada, 3-9 mai 2008.



37. [DESE-08a] V. Desestret, J.C. Brisset, E. Devillard, S. Moucharrafie, S. Nataf, J. Honnorat, N. Nighoghossian, Y. Berthezène, and M. Wiart. Interprétation des changements précoces de signal en IRM après injection d'USPIO dans un modèle murin d'ischémie cérébrale. In 12ème congrès du GRAMM, Lyon, France, 26-28 mars 2008.



38. [DUCR-08b] N. Ducros, A. da Silva, J.M. Dinten, and F. Peyrin. Continuous Wave and Time-Resolved Fluorescence Diffuse Optical Tomography: Comparison for Different Lifetimes and Optical Properties. In Biomedical Optics, pages BMD25, 2008. OSA.



39. [DUCR-08a] N. Ducros, A. da Silva, J.M. Dinten, and F. Peyrin. Fluorescence diffuse optical tomography: A simulation-based study comparing time-resolved and continuous wave reconstructions performances. In Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on, pages 388-391, May 2008.



40. [HAIA-08a] G. Haiat, F. Padilla, F. Peyrin, and P. Laugier. Influence of bone mass and of structural anisotropy on the fast and slow wave propagation in femoral trabecular bone. In International Bone Densitometry Workshop, Pugnochioso, Italy, 2008.



41. [LARR-08] A. Larrue, Z. Peter, A. Rattner, L. Vico, and F. Peyrin. Denoising of Synchrotron Radiation Micro-Ct Images of Trabecular Bone for the Extraction of 3d Quantitative Data on Micro-Cracks. In IEEE MIC, Dresden, Germany, October 2008.



42. [LARR-08b] A. Larrue, Z. Peter, A. Rattner, L. Vico, and F. Peyrin. Three-dimensional evaluation of micro-cracks in human trabecular bone. In Proceedings IBDW, Pugnochiuso, Foggia, Italy, June 2008.



43. [PETE-08b] Z. Peter, B. Perrenot, A. Larrue, and F. Peyrin. Hessian Based Orientation Analysis of the Canal Network in Cortical Bone Micro-CT Images. In IEEE MIC, Dresden, Germany, October 2008.



44. [POUL-08] P. Pouletaut, J.C. Goebel, A. Pinzano, R. Bolbos, O. Beuf, P. Netter, M.C. Ho Ba Tho, and P. Gillet. MRI study of rat cartilage ageing process: knee joint contact sites geometrical assessments. In XXXIII Congress of the Société de Biomécanique, Compiègne, France, pages 183-184, 1-3 septembre 2008.



45. [PRIS-08] R. Prisby, Z. Peter, A. Guignandon, A. Vanden-Bossche, L. Malaval, L. Vico, F. Peyrin, and M.H. Lafage-Proust. Anabolic Daily Intermittent PTH 1-84 Reduces Bone Blood Vascular Bed and Induces Dramatic Changes in the Bone/Vessel Spatial Relationship. In Proceedings ASBMR, Montreal, Canada, September 2008.



46. [RUPI-08] F. Rupin, A. Saied, D. Dalmas, F. Peyrin, K Raum, E. Barthel, G. Boivin, and P. Laugier. Assessment of microelastic properties of bone using scanning acoustic microscopy : a face-to-face comparison with nanoindentation. In International Bone Densitometry Workshop, Pugnochioso, Italy, 2008.



47. [GUIO-07a] F. De Guio, H. Benoit-Cattin, and A. Davenel. Characterization of signal loss due to magnetic susceptibility interfaces in gradient echo imaging by simulations and experiments. In EUROMAR'07, Tarragona, Espagne, June 2007.



48. [GUIO-07b] F. De Guio, H. Benoit-Cattin, and A. Davenel. Quantitative study of the signal decay due to magnetic susceptibility interfaces: MRI simulations and experiments. In IEEE EMBC'07, Lyon, France, August 2007.



49. [DESE-07a] V. Desestret, J.C. Brisset, E. Devillard, S. Moucharrafie, M. Tappaz, S. Nataf, N. Nighoghossian, Y. Berthezène, and M. Wiart. Early stages investigation of USPIO-induced signal loss after focal cerebral ischemia in mice. In Contrast Media Research Symposium, Banff, Canada, 2007.



50. [DUCR-07] N. Ducros, A. Da Silva, J.M. Dinten, and F. Peyrin. A simulation-based study of reconstruction in Time-resolved Fluorescence Diffuse Optical Tomography in Cylindrical geometry. In Engineering in Medicine and Biology Society, 2007. EMBS 2007. 29th Annual International Conference of the IEEE, pages 2639-2642, Aug. 2007.



51. [DEPR-07] J.F. Déprez, G. Cloutier, C. Schmitt, C. Gehin, A. Dittmar, O. Basset, and E. Brusseau. 3D Ultrasound Elastography for Early Detection of Lesions. Evaluation on a Pressure Ulcer Mimicking Phantom. In Proc. 29th Int. IEEE EMBC 2007, Lyon, France, pages 79-82, 2007.



52. [PETE-07] Z. Peter, V. Bousson, C. Bergot, and F. Peyrin. Segmentation of low-contrast features in bone micro-CT images by a constraint region growing approach based on watershed. In IEEE International Symposium on Biomedical Imaging (ISBI), Washington DC, USA, pages 968-971, 2007.



53. [ROUC-07a] Y. Rouchdy, J. Pousin, J. Schaerer, and P. Clarysse. A hyperelastic deformable template for cardiac segmentation in MRI. In Functional Imaging and Modeling of the Heart, volume LNCS 4466, Salt Lake City, UT, USA, pages 443-452, June 2007.



54. [SCHA-07b] J. Schaerer, P. Clarysse, and J. Pousin. A New Dynamic Elastic Model for Cardiac Image Analysis. In Proceedings of the 29th Annual International Conference of the IEEE EMBS, Lyon, France, pages 4488-4491, August 2007.



55. [COUR-06b] G. Courbebaisse. Contribution to the Measurement of Turbulent Structures in Internal Combustion Chamber. In International Conference on Turbulences and Interactions - TI2006, Porquerolles, France, pages CD, May 2006.



56. [DAVO-07] N. Davoust, J.B. Pialat, S. Moucharrafie, T.H. Cho, M. Mutin, J.B. Langlois, O. Beuf, J. Honnorat, N. Nighoghossian, Y. Berthezène, and M. Wiart. MR-tracking of in vivo magnetically labeled macrophages detects remote inflammation in focal ischemia of the mouse brain. In Journal of neuroimmunology, volume 178, Nagoya, Japan, pages 250, 2006.



57. [DELP-06a] P. Delpierre, S. Basolo, J.F. Berar, A. Bonissent, P. Breugnon, N. Boudet, B. Caillot, B. Chantepie, J.C. Clemens, F. Debarbieux, B. Dinkespiler, R. Khouri, I. Koudobine, V. Mararazzo, C. Meessen, M. Menouni, C. Morel, C. Mouget, P. Pangaud, F. Peyrin, G. Rougon, D. Sappey-Marinier, S. Valton, and E. Vigeolas. PIXSCAN: Pixel Detector CT-Scanner for Small Animal Imaging. In EUROMEDIM, Marseille, France, pages 425-428, May 2006.



58. [ESCO-06b] R. Escolà, C. Pouzat, B. Yvert, I.E. Magnin, and R. Guillemaud. SIMONE: A new simulation engine of realistic MEA-based extracellular measurements. In 5th International Meeting on Substrate-Integrated Micro Electrode Arrays, Reutlingen, Germany, pages 71-72, July 2006.



59. [FEI-06b] J. Fei, F. Peyrin, L. Malaval, L. Vico, and M.H. Lafage-Proust. Imaging of Bone Vascularisation in Adult Rat from conventional and Synchrotron Radiation Micro CT. In 17th International Bone Densitometry Workshop, Kyoto, Japon, 2006.



60. [LOLL-06] J. Lollierou, D. Sappey-Marinier, and M. Boutemeur. Small Animal PET Slow Control System. In First International Conference on Molecular Technologies, Euromedim2006, Marseille, France, pages (in-press), Avril 2006.



61. [PETE-06c] Z. Peter, P. Bleuet, M.H. Lafage-Proust, and F. Peyrin. Feasibility of Three-Dimensional Imaging of the Lacuno-Canalicular Network from Synchrotron Radiation Micro-CT. In 17th International Bone Densitometry Workshop, Kyoto, Japon, 2006.



62. [PETE-06b] Z. Peter, V. Bousson, C. Bergot, and F. Peyrin. Segmentation of Remodeling Regions in Bone Micro-CT Images. In 17th International Bone Densitometry Workshop, Kyoto, Japon, 2006.



63. [TAVE-06] M. Taverne, L. Guigues, and M. Boutemeur. Small Animal and Online hadrontherapy PET Detector Characterisation. In First European Conference on Molecular Imaging Technology (EUROMEDIM'06), Marseille, France, May 2006.



64. [VALT-06d] S. Valton, F. Peyrin, P. Delpierre, F. Debarbieux, A. Bonissent, R. Khoury, C. Meessen, C. Morel, and D. Sappey-Marinier. Evaluation of tomographic reconstruction methods for small animal microCT and microPET/CT. In EUROMEDIM, Marseille, France, pages 278-281, May 2006.



65. [WIAR-06c] M. Wiart, L. Curiel, A. Gelet, D. Lyonnet, J.Y. Chapelon, and O. Rouvière. Influence of prostate perfusion on high-intensity focused ultrasound cancer ablation: a first-pass MRI study. In International Society for Magnetic Resonance in Medicine, Seattle, Washington, USA, 2006.



66. [WU-06] Y. Wu, C. Bergot, E. Jolivet, F. Peyrin, V. Bousson, and J.D. Laredo. Distribution of mineral in cortical bone of the human femoral neck by using Synchrotron radiation. In 17th International Bone Densitometry Workshop, Kyoto, Japon, 2006.



67. [BOLL-05] E. Boller, P. Cloetens, R. Mokso, P. Tafforeau, X. Thibault, F. Peyrin, A. Marmottant, P. Pernot, and J. Baruchel. Fast acquisition high-resolution synchrotron radiation X-ray microtomography for academic and industrial purposes. In 2nd Int. Conf. on computational Methods and Experiments in Material Characterisation, Portland, USA, pages (in-press), 2005.



68. [DELP-05] P. Delpierre, S. Basolo, J.F. Berar, A. Bonissent, P. Breugnon, N. Boudet, B. Caillot, J.C. Clemens, B. Dinkespiler, R. Khouri, I. Koudobine, V. Matarazzo, C. Meessen, M. Menouni, C. Morel, C. Mouget, P. Pangaud, F. Peyrin, D. Sappey-Marinier, S. Valton, and E. Vigeolas. PIXSCAN: Pixel Detector CT-Scanner for Small Animal Imaging. In IEEE NSS and MIC (Medical Imaging Conference), Puerto Rico, USA, pages 2381-2385, 2005.



69. [DURN-05] B. Durning, C. Cachard, H. Thibault, G. Derumeaux, and M. Ovize. Estimation of mouse contrast echocardiography setup with SECI. In EMBEC'05, Prague, Czech Republic, February 2005.



70. [GERM-05] C. Germain, V. Breton, P. Clarysse, Y. Gaudeau, T. Glatard, E. Jeannot, Y. Legré, C. Loomis, J. Montagnat, J.M. Moureaux, A. Osorio, and R. Texier. Grid-enabling medical image analysis. In Biogrid'05, proceedings of the IEEE/ACM International Symposium on Cluster Computing and the Grid, Cardiff, UK, May 2005.



71. [LAMO-05a] T. Lamotte, J.M. Dinten, and F. Peyrin. A priori model for bone microarchitecture reconstruction with a very limited number of projections. In ICIP'05, Gènes, Italy, pages 609-612, 2005.



72. [LAMO-05b] T. Lamotte, J.M. Dinten, and F. Peyrin. Modelisation of three-dimensional bone micro-architecture using Markov Random Fields with a multilevel clique system. In SPIE International Symposium on Medical Imaging, volume 5747, San Diego, USA, pages 1356-1365, 2005.



73. [LART-05b] C. Lartizien and I. Buvat. Comparison of 3D PET data bootstrap resampling methods for numerical observers studies. In Proc of the 2005 IEEE NSS and MIC Conference, number 4, Puerto Rico, USA, pages 2138-2147, 2005.



74. [PASO-05] M. Pasovic, O. Basset, C. Odet, J.M. Dinten, V. Boudousq, P.O. Kotzki, and F. Peyrin. Evaluation of radiographic texture analysis for the characterization of 3D bone micro-architecture: influence of spatial resolution. In EMBEC (European Medical and Biological Engineering Conference), Prague, Czech Republic, pages (in-press), 2005.



75. [POUS-05] J. Pousin, Y. Rouchdy, M. Picq, J. Schaerer, and P. Clarysse. Constrained 3D elastic model for the segmentation in cardiac MRI. In Computers In Cardiology, Lyon, France, pages 785-788, 2005.



76. [APOS-04c] L. Apostol, O. Basset, S. Yot, C. Odet, J. Tabary, J.M. Dinten, E. Boller, V. Boudousq, P. O. Kotzki, and F. Peyrin. What are the most relevant 2D radiographic texture parameters to assess 3D bone micro-architecture ?. In 16th International Bone Densitometry Workshop, Annecy, France, 2004.



77. [APOS-04b] L. Apostol, F. Peyrin, S. Yot, C. Odet, O. Basset, J. Tabary, J.M. Dinten, E. Boller, V. Boudousq, and P.O. Kotzki. A procedure for the evaluation of 2D radiographic texture analysis to assess 3D bone micro-architecture. In SPIE Medical Imaging, San Diego, USA, 2004.



78. [BOLB-04] R. Bolbos, O. Beuf, H. Benoit-Cattin, C. Odet, P. Pastoureau, and M. Janier. Cartilage characterization method in a guinea pig osteoarthritis model: Reproducibility of morphological measures using MRI. In European Society for Magnetic Resonance in Medicine and Biology, 21st Annual Scientific Meeting, Copenhagen, Denmark, pages 38, 2004.



79. [BOSS-04b] E. Bossy, M. Talmant, F. Peyrin, L. Akrout, P. Cloetens, and P. Laugier. Effects of porosity and mineralization on axial transmission ultrasonic velocity in human forearms : a contribution to our understanding of ultrasound interaction with cortical bone. In 16th International Bone Densitometry Workshop, Annecy, France, 2004.



80. [CHAP-04] C. Chappard, B. Brunet-Imbault, A. Basillais, A. Bonnassie, N. Bonnet, C.L. Benhamou, and F. Peyrin. Assessment of trabecular bone microarchitecture from synchrotron radiation and desktop X-ray micro tomography: a comparative study on human femoral head Workshop. In 16th International Bone Densitometry Workshop, Annecy, France, 2004.



81. [JENS-04] F. Jenson, F. Padilla, P. Cloetens, J.D. Laredo, F. Peyrin, and P. Laugier. Relationship between quantitative ultrasound measurements at the femur and bone density and micro architecture : an in vitro study. In 16th International Bone Densitometry Workshop, Annecy, France, 2004.



82. [LAMO-04] T. Lamotte, J.M. Dinten, and F. Peyrin. Modelisation of three-dimensional bone micro-architecture using Markov Random Fields : first results. In 16th International Bone Densitometry Workshop, Annecy, France, 2004.



83. [BARB-03] R. Barbier, Y. Déclais, C. Dujardin, I.A. Kamenskikh, G. Largeron, J. Marteau, C. Pédrini, and D. Sappey-Marinier. Two heads small animal PET prototype with LSO/LuAP coupled to a multi-anode PMT. In Second ITBS meeting, Milos, Greece, pages (in-press), Sept 2003.



84. [COUR-03] G. Courbebaisse, D. Garcia, and P. Bourgi. A way towards optimization of injection molding. In Joint Fluid Engineering Conference - JSME; American Society of Mechanical Engineer - 4th ASME, Hawaii, USA, pages FEDSM2003-45763, November 2003.



85. [LARG-03] G. Largeron, R. Barbier, and D. Sappey-Marinier. HadronPET simulation with GATE. In 9th Heavy Charged Particles in Biology and Medicine, Lyon, France, October 2003.



86. [LART-03a] C. Lartizien, N. Costes, M. Janier, and D. Sappey-Marinier. Simulated performance characteristics of the Lyon ClearPET scanner. In Second ITBS meeting, Milos, Greece, Sept 2003.



87. [SAPP-03b] D. Sappey-Marinier, C. Lartizien, N. Costes, R. Barbier, J. Marteau, C. Dujardin, C. Pédrini, P. Lecoq, S. Tavernier, and M. Janier. Développement instrumental d'un prototype de microTEP pour l'étude de la souris transgénique. In 41ème Congrès de la Société Française de Biophysique et de Médecine Nucléaire, Tours, France, pages (in-press), October 2003.



88. [ZHU-03] Y. M. Zhu, J.H. Luo, P. Clarysse, and I.E. Magnin. Correction des inhomogénéités d'intensité en IRM. In Conférences F. Lhermitte - 13e Rendez-Vous de l'ARSEP, Paris, France, pages 35, 2003.



89. [CLAR-01a] P. Clarysse, C. Lavorel, A. Glière, P. Grangeat, and I.E. Magnin. Un modèle de thorax respirant pour l'évaluation d'algorithmes de reconstruction d'organes en mouvement par tomographie virtuelle. In GRETSI'01, Toulouse, France, 10-13 septembre 2001.



90. [ORKI-01d] M. Orkisz, A. Frery, O. Chapet, F. Mornex, and I.E. Magnin. Attempts to bronchial tumor motion tracking in portal images during conformal radiotherapy treatment. In W. Skarbek, editor, 9th IAPR Conf Computer Analysis of Image Patterns (CAIP'2001), volume 2124, Warsaw, Poland, pages 247-255, 2001. Lecture Notes in Comp. Science, Publ..



91. [SARR-01b] M. Sarrut, S. Miguet, F. Vincent, P. Clarysse, M. Exbrayat, L. Brunie, M. Fleute, L. Desbat, and I.E. Magnin. Requêtes complexes et hybrides dans des bases d'images médicales distantes. Une illustration en imagerie cardiaque. In ASTI'2001, Paris, France, 24-27 mai 2001.



92. [FLAM-98a] T. Flam, M. Orkisz, T. Farchtchian, M. Bourlion, D. Saighi, G. Gimenez, and B. Debré. Image-based renal stone tracking to Improve efficacy of extracorporeal shock wave lithotripsy. In American Urological Association 93rd Annual Meeting, volume 5 of J Urol, San Diego, USA, pages 127, 30 mai - 4 juin 1998.



93. [FLAM-98b] T. Flam, M. Orkisz, T. Farchtchian, M. Bourlion, D. Saighi, G. Gimenez, and B. Debré. Image-based renal stone tracking to improve efficacy of extracorporeal shock wave lithotripsy. In European Urology, 33 : S1, XIIIth Congress of the European Association of Urology, Barcelona, Spain, pages 113, 22-25 mars 1998.



94. [FLAM-97] T. Flam, D. Saighi, M. Bourlion, M. Orkisz, T. Farchtchian, P.F. Gerbaud, M. Charif Chefchaouni, N. Thouin, and B. Debré. Suivi automatique des calculs par reconnaissance d'image en temps réel, en cours de lithotritie extra-corporelle : principes et avantages du sytème Echotrack. In Congrès Français d'Urologie, Paris, France, pages 6A, 1997.



95. [ORKI-97b] M. Orkisz, S. Mosnier, J.P. Roux, G. Gonnot, R. Brion, and I.E. Magnin. Automated heart-wall instantaneous velocity estimation from M-mode echography images. In World Congress on Medical Physics and Biomedical Engineering, volume 35 of Med Biol Eng Comp, Nice, France, pages 682, 1997.



96. [KOCH-96] E. Kochian, M. Orkisz, G. Gimenez, and M. Bourlion. Application d'un algorithme de mise en correspondance au suivi temps réel de lithiases. In AGI, Tours, France, pages 329-332, 1996.



97. [BASS-94a] A. Basset, M. Orkisz, I.E. Magnin, and R. Brion. Dense motion field estimation involving discontinuities applied to echocardiographic image sequences. In IEEE International Ultrasonics Symposium, Cannes, France, pages 1573-1576, 1994.



98. [ORKI-93] M. Orkisz and D. Pellerin. Estimation du mouvement par approche mixte : droites de contrainte/mise en correspondance. In 14e Colloque sur le Traitement du Signal et des Images GRETSI, Juan-les-Pins, France, pages 855-858, 1993.

1. [BEUF-10a] O. Beuf, J.C. Goebel, D. Grenier, A-L. Perrier, A. Pinzano-Watrin, C. Henrionnet, L. Galois, and P. Gillet. New trends in MRI of cartilage: Advances and limitations in small-animal studies. In 5ème réunion scientifique Internationale du Pole Lorrain d'Ingénierie du Cartilage (PLIC), Nancy, France, 4 et 5 Février 2010.



2. [BEUF-08d] O. Beuf, R. Bolbos, A. Rengle, H. Benoit-Cattin, P. Pastoureau, J.C. Goebel, A. Pinzano-Watrin, and P. Gillet. MRI techniques for cartilage studies in small-animal models of osteoarthritis. In 4ème réunion scientifique Internationale du Pole Lorrain d'Ingénierie du Cartilage (PLIC), Nancy, France, 10, 11 et 12 Septembre 2008.



3. [WIAR-08a] M. Wiart. Magnetic resonance imaging (MRI) using cell labeling in small animal models. In European Society for Magnetic Resonance in Medicine and Biology, Valencia, Espagne, 2-4 octobre 2008.



4. [WIAR-08b] M. Wiart, T.H. Cho, and N. Nighoghossian. Apport de l'IRM multimodale pour le diagnostic des AVC. In Journees Francaises de Radiologie (JFR), Paris, France, 2008.



5. [WIAR-07] M. Wiart, N. Davoust, J.B. Pialat, N. Nighoghossian, and Y. Berthezène. Magnetic resonance imaging (MRI) of inflammation in stroke. In Conf Proc IEEE Eng Med Biol Soc, volume 1, Lyon, France, pages 4316-4319, 2007.

1. [GLAT-09c] T. Glatard, S. Camarasu-Pop, H. Benoit-Cattin, P. Clarysse, J. Montagnat, J. Moscicki, S. Olabarriaga, and D. Sarrut. Integrating pilot-jobs, workflows and virtual resource browser to foster medical image analysis on EGEE. EGEE User Forum, March 2009.



2. [VRAY-09] D. Vray, N. Djaker, L. Guyon, L. Saroul, F. Duboeuf, D. Friboulet, and J. Boutet. Brevet N. 09 - Français. Fantome bi-modalité destiné à simuler les propriétés ultrasonores et optiques de la prostate, 2009.



3. [VRAY-08] D. Vray and T. Pechoux. Brevet N. 08 54572 - Français, N. PCT/FR2009/051305 - International. Méthode de traçage du contour vraisemblable d'un élément anatomique sur une image de coupe, 2008.

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