1. [GERM-09] Cécile Germain-Renaud, Vincent Breton, Patrick Clarysse, Bertrand Delhay, Yann Gaudeau, Tristan Glatard, Emmanuel Jeannot, Yannick Legré, Johan Montagnat, Jean Marie Moureaux, Angel Osorio, Xavier Pennec, Joël Schaerer, and Romain Texier. Grid Analysis of Radiological Data. In Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare, chapter XIX. Mario Cannataro, editor. IGI, 2009.

1. [CLAR-05] P. Clarysse. Analyse d'images cardiaques assistée par les modèles. H.D.R., INSA Lyon / Université Claude-Bernard Lyon I, 2005. Jury: Axel L. (rap.), Ayache N. (rap.), Herment A. (rap.), Pousin J., Bittoun J., Revel D. et Magnin I.E.

1. [ARTS-10] T. Arts, F. W. Prinzen, T. Delhaas, J. R. Milles, A. C. Rossi, and P. Clarysse. Mapping Displacement and Deformation of the Heart With Local Sine-Wave Modeling. IEEE T Med Imaging, 29(5):1114-1123, 2010.



2. [CLAR-10a] P. Clarysse, B. Delhay, M. Picq, and J. Pousin. Optimal extended optical flow subject to a statistical constraint. J Comput Appl Math, 234:1291-1302, 2010.



3. [CLAR-10b] Patrick Clarysse, Martine Picq, and Jérôme Pousin. Optimal extended optical flow and statistical constraints: A result of convergence. J Comput Appl Math, -(-):in press, 2010.



4. [SCHA-10] Joël Schaerer, Christopher Casta, Jérôme Pousin, and Patrick Clarysse. A dynamic elastic model for segmentation and tracking of the heart in MR image sequences. Med Image Anal, 14(6):738-749, 2010.



5. [VAN-10] J. Vandemeulebroucke, S. Rit, J. Kybic, P. Clarysse, and D. Sarrut. Spatio-Temporal Motion Estimation for Respiratory-Correlated Imaging of the Lungs. Med Phys, to appear, 2010.



6. [BERK-09] M. Berkane, P. Clarysse, J. Yankam Njiwa, Y-M. Zhu, and I. E. Magnin. Spatio-temporal summarizing method of periodic image sequences with Kohonen Maps. Neural Network World, pp (in press), 2009.



7. [ROUC-07] Y. Rouchdy, J. Pousin, J. Schaerer, and P. Clarysse. A nonlinear elastic deformable template for soft structure segmentation: application to the heart segmentation in MRI. Inverse Problems, 23:1017-1035, 2007.



8. [SARR-07] D. Sarrut, B. Delhay, P.F. Villard, V. Boldea, M. Beuve, and P. Clarysse. A comparison framework for breathing motion estimation methods from 4D imaging. IEEE Trans Med Imaging, 26(12):1636-1648, 2007.



9. [GERM-05] C. Germain, V. Breton, P. Clarysse, Y. Gaudeau, T. Glatard, E. Jeannot, Y. Legre, C. Loomis, I.E. Magnin, J. Montagnat, J.M. Moureau, A. Osorio, X. Pennec, and R. Texier. Grid-enabling medical image analysis. J Clin Monit Comput, 19(4-5):339-349, 2005.



10. [HADD-05c] R. Haddad, P. Clarysse, M. Orkisz, D. Revel, and I. E. Magnin. A realistic anthropomorphic numerical model of the beating heart. Innov Tech Biol Med - RBM, 26(4):270-272, 2005.



11. [LUO-05] J. Luo, Y.M. Zhu, P. Clarysse, and I.E. Magnin. Correction of Bias Field in MR Images Using Singularity Function Analysis. IEEE Trans Med Imaging, 24(8):1067-1085, 2005.



12. [CLAR-04] P. Clarysse, F. Frouin, M. Garreau, A. Lalande, H. Rousseau, D. Sarrut, and C. Vasseur. Intégration de connaissances et modélisation en imagerie médicale. Innov Tech Biol Med - RBM, 25(3):139-149, 2004.



13. [MAKE-03a] T. Makela, Q.C. Pham, P. Clarysse, J. Lotjonen, O. Sipila, H. Hanninen, K. Lauerma, J. Knutti, T. Katila, and I.E. Magnin. A 3D model-based registration approach for the PET, MR and MCG cardiac data fusion. Med Image Anal, 7(3):377-389, 2003.



14. [CLAR-02] P. Clarysse, M. Han, P. Croisille, and I.E. Magnin. Exploratory analysis of the spatio-temporal deformation of the myocardium during systole from tagged MRI. IEEE Trans Biomed Engin, 149(1):1328-1339, 2002.



15. [MAKE-02] T. Makela, P. Clarysse, O. Sipila, N. Pauna, Q.C. Pham, T. Katila, and I.E. Magnin. A review of cardiac registration methods. IEEE Trans Med Imaging, 21(9):1011-1021, 2002.



16. [CLAR-00a] P. Clarysse, C. Basset, L. Khouas, P. Croisille, D. Friboulet, C. Odet, and I.E. Magnin. 2D spatial and temporal displacement field fitting from cardiac MR tagging. Med Image Anal, pp 253-268, 2000.



17. [VERN-99] H. Vernhet, D. Revel, C. Arteaga, P. Clarysse, F. Sottilini, J.P. Roux, and E. Canet-Soulas. Predictive value of regional left ventricular circumferential shortening in jeopardized myocardium : a 2D SPAMM Cine-MR imaging study in a canine model (in process citation). Invest Radiol, 34(10):621-628, 1999.



18. [HAN-98b] M. Han, P. Clarysse, P. Croisille, I.E. Magnin, and D. Revel. Aide à l'analyse de l'évolution spatio-temporelle de la déformation du myocarde. Innov Tech Biol Med, 19 Spé(5):379-388, 1998.



19. [KHOU-98a] L. Khouas, P. Clarysse, D. Friboulet, and C. Odet. Fast 2D vector field visualization using a 2D texture synthesis based on an autoregressive filter. Application to cardiac imaging. Mach Graph Vision, 7(4):751-764, 1998.



20. [CLAR-97a] P. Clarysse, D. Friboulet, and I.E. Magnin. Tracking geometrical descriptors on 3D deformable surfaces. Application to the left-ventricular surface of the heart. IEEE Trans Med Imaging, 16(4):392-404, 1997.



21. [REIS-97a] P.J. Reissman, P. Clarysse, and I.E. Magnin. Modélisation et mise en correspondance avec la pyramide neuractive. Traitement du Signal, 14(4):395-403, 1997.



22. [ORKI-96c] M. Orkisz and P. Clarysse. Estimation du flot optique en présence de discontinuités : une revue. Traitement du Signal, 13(5):489-513, 1996.



23. [ROUS-92b] Jean Rousseau, Patrick Clarysse, David Gibon, Serge Blond, N. Bradaï, and Xavier Marchandise. A frameless method for 3D MRI- and CT- guided stereotaxic localization. Neuroradiology, 2:35-41, 1992.



24. [ROUS-92a] Jean Rousseau, David Gibon, Patrick Clarysse, J.P. Pruvo, Serge Blond, and Xavier Marchandise. Une méthode de repérage stéréotaxique par IRM. J Med Nucl Biophy, 16(4):374-379, 1992.



25. [CLAR-91] P. Clarysse, D. Gibond, J. Rousseau, S. Blond, C. Vasseur, and X. Marchandise. A computer assisted system for 3D frameless localization in stereotaxic MRI. IEEE Trans Med Imaging, 10(4):523-529, 1991.



26. [GIBO-91] D. Gibon, P. Clarysse, J. Rousseau, S. Blond, R. Decool, and X. Marchandise. Station d'imagerie stéréotaxique en neurochirurgie et radiothérapie multifaisceaux. Bull Cancer / Radiother., 78:321-325, 1991.



27. [ROUS-91] J. Rousseau, P. Clarysse, S. Blond, D. Gibon, C. Vasseur, and X. Marchandise. Validation of a new method for stereotactic localization using MR Imaging. Journal of Computer Assisted Tomography, 15(2):291-296, 1991.

1. [CLAR-08] P. Clarysse, D. Metaxas, and J. Pousin, editors. Special Issue of Mathematical Modelling of Natural Phenomena on 'Medical Imaging', volume 3, 2008. EDP Sciences, Publ.



2. [MAGN-03] I.E. Magnin, J. Montagnat, P. Clarysse, J. Nenonen, and T. Katila, editors. Proceedings of the Second International Workshop on Functional Imaging and Modeling of the Heart (FIMH'03), LNCS 2674, 300 pages, Some City, Some Country, 2003. Springer Verlag, Publ.



3. [KATI-01] T. Katila, I. E. Magnin, P. Clarysse, J. Montagnat, and J. Nenonen, editors. Proceedings of the First International Workshop on Functional Imaging and Modeling of the Heart (FIMH'01), LNCS 2432, 158 pages, Some City, Some Country, 2001. Springer Verlag, Publ..

1. [CAST-10] Christopher Casta, Patrick Clarysse, Jérôme Pousin, Joël Schaerer, Pierre Croisille, and Yue-Min Zhu. Incorporating low-level constraints for the retrieval of personalised heart models from dynamic MRI. In Statistical Atlases and Computational Models of the Heart: Mapping Structure and Function (STACOM), MICCAI 2010 Workshop, volume LNCS 6364, pages 174-183, 2010. Springer-Verlag Berlin Heidelberg.



2. [CAST-09] J. Casta, P. Clarysse, J. Schaerer, and J. Pousin. Evaluation of the Dynamic Deformable Elastic Template model for the segmentation of the heart in MRI sequences. In Midas Journal: MICCAI Workshop - 3D Segmentation in the Clinic: A Grand Challenge III, London, UK, September 2009.



3. [KISS-09] A. Kissi, C. Tilmant, A. De Cesare, A. Comte, L. Najman, A. Lalande, P. Clarysse, M. Garreau, L. Sarry, and F. Frouin. Initiative multicentrique pour une plateforme d'évaluation en imagerie cardiaque. In RITS, Lille, France, March 2009.



4. [MAHE-2009] K. Maheshwari, T. Glatard, J. Schaerer, B. Delhay, S. Camarasu-Pop, P. Clarysse, and J. Montagnat. Towards Production-level Cardiac Image Analysis with Grids. In HealthGrid'09, Berlin, june 2009.



5. [VAND-09] J. Vandemeulebroucke, J. Kybic, P. Clarysse, and D. Sarrut. Respiratory motion estimation from cone-beam projections using a prior model. In Medical Image Computing and Computer-Assisted Intervention (MICCAI'09), London, UK, pages in-press, sept 2009. Springer.



6. [YANK-09] J. Yankam Njiwa, M. Berkane, J.H. Luo, P. Clarysse, I.E. Magnin, and Y.M. Zhu. Reconstruction of cardiac Cine MR Images using analytic image and neural networks. In ISPA'09, Salzburg, Austria, pages in-press, 2009.



7. [BERK-08b] M. Berkane, P. Clarysse, and I.E. Magnin. A Neural Network-Based Approach to Motion Estimation with Discontinuities. In Hybrid Intelligent Systems, 2008 (HIS '08). Eighth International Conference on, Barcelona, Spain, pages 356-361, September 2008.



8. [BERK-08a] M. Berkane, P. Clarysse, and I.E. Magnin. Spatio-temporal summarizing method of periodic sequences with Kohonen maps. In Artificial Neural Networks - ICANN 2008, volume LNCS 5163, Pragues, Czech Republic, pages 818-826, September 2008. Springer Berlin / Heidelberg.



9. [BERK-08c] M. Berkane, P. Clarysse, and I.E. Magnin. Une approche neuronale pour l'extraction de résumé de séquences d'images pour des phénomènes quasi-périodiques. In Journées d'Etudes Algéro-Françaises en Imagerie Médicale, JETIM'08, Tipaza, Algérie, pages 83-87, November 2008.



10. [CAMA-08b] S. Camarasu-Pop, H. Benoit-Cattin, L. Guigues, P. Clarysse, O. Bernard, and D. Friboulet. Towards a Virtual Radiological Platform Based on a Grid Infrastructure. In Medical imaging on grids: achievements and perspectives (MICCAI Grid Workshop), New York, USA, pages 85-95, Sept 2008.



11. [FRIN-08] C. Frindel, P. Gueth, P. Clarysse, Y.M. Zhu, and M. Robini. A global approach to cardiac tractography. In Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on, pages 883-886, May 2008.



12. [SCHA-08] J. Schaerer, J. Pousin, and P. Clarysse. A new singular perturbation approach for image segmentation tracking. In Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on, pages 1445-1448, May 2008.



13. [VAND-08] J. Vandemeulebroucke, P. Clarysse, J. Kybic, and D. Sarrut. Estimating Respiratory Motion from Cone-Beam Projections. In In Medical Image Computing and Computer-Assisted Intervention MICCAI'2008, The First International Workshop on Pulmonary Image Analysis, New York, September 2008.



14. [DELH-07] B. Delhay, P. Clarysse, and I.E. Magnin. Locally adapted spatio-temporal deformation model for dense motion estimation in periodic cardiac image sequences. In Functional Imaging and Modeling of the Heart, volume LNCS 4466, Salt Lake City, UT, USA, pages 393-402, June 2007.



15. [GELA-07a] A. Gelas, J. Schaerer, O. Bernard, D. Friboulet, P. Clarysse, I.E. Magnin, and R. Prost. Radial Basis Functions Collocation Methods For Model-Based Level-set Segmentation. In IEEE International Conference on Image Processing (ICIP), volume 2, San Antonio, TX, USA, pages 237-240, September 2007.



16. [HADD-07] R. Haddad, I.E. Magnin, and P. Clarysse. A new fully-digital anthropomorphic and dynamic thorax/heart model. In Proceedings of the 29th Annual International Conference of the IEEE EMBS, Lyon, France, pages 5999-6002, August 2007.



17. [ROUC-07a] Y. Rouchdy, J. Pousin, J. Schaerer, and P. Clarysse. A hyperelastic deformable template for cardiac segmentation in MRI. In Functional Imaging and Modeling of the Heart, volume LNCS 4466, Salt Lake City, UT, USA, pages 443-452, June 2007.



18. [SCHA-07b] J. Schaerer, P. Clarysse, and J. Pousin. A New Dynamic Elastic Model for Cardiac Image Analysis. In Proceedings of the 29th Annual International Conference of the IEEE EMBS, Lyon, France, pages 4488-4491, August 2007.



19. [SCHA-07a] J. Schaerer, A. Gelas, R. Prost, P. Clarysse, and I. E. Magnin. Volumetric Mesh Construction From Scattered Prior Data: Application To Cardiac MR Image Analysis. In European Signal Processing Conference, Poznan, Poland, pages 438-442, September 2007.



20. [VAND-07] J. Vandemeulebroucke, D. Sarrut, and P. Clarysse. Point-validated Pixel-based Breathing Thorax Model. In International Conference on the Use of Computers in Radiation Therapy (ICCR), Toronto, Canada, June 2007.



21. [DELH-06] B. Delhay, P. Clarysse, C. Pera, and I.E. Magnin. A spatio-temporal deformation model for dense motion estimation in periodic cardiac image sequences. In From Statistical Atlases to Personalized Models: Understanding Complex Diseases in Populations and Individuals, Satellite Workshop MICCAI 2006, Copenhagen, Denmark, pages (in-press), October 2006.



22. [SCHA-06] J. Schaerer, Z. Qian, P. Clarysse, D. Metaxas, L. Axel, and I.E. Magnin. Fast and automated creation of patient-specific 3D heart model from tagged MRI. In From Statistical Atlases to Personalized Models: Understanding Complex Diseases in Populations and Individuals, Satellite Workshop MICCAI 2006, Copenhagen, Denmark, pages 91-94, October 2006.



23. [BRUS-05] E. Brusseau, G. Said, and P. Clarysse. Modèle numérique d'estimation 2D de la déformation des tissus mous biologiques à partir d'images échographiques radiofréquence: Résultats sur simulations numériques et données expérimentales. In GRETSI'05, Louvain-La-Neuve, Belgium, pages 287-290, 2005.



24. [DELH-05b] B. Delhay, P. Clarysse, J. Lotjonen, T. Katila, and I.E. Magnin. Evaluation of two free form deformation based motion estimators in cardiac and chest imaging. In Functional Imaging and Modeling of the Heart (FIMH), Barcelona, Spain, pages 467-476, 2005.



25. [DELH-05] B. Delhay, J. Lotjonen, P. Clarysse, T. Katila, and I.E. Magnin. A Dynamic 3-D Cardiac Surface Model from MR Images. In Computers In Cardiology, Lyon, France, pages 423-426, 2005.



26. [GERM-05] C. Germain, V. Breton, P. Clarysse, Y. Gaudeau, T. Glatard, E. Jeannot, Y. Legré, C. Loomis, J. Montagnat, J.M. Moureaux, A. Osorio, and R. Texier. Grid-enabling medical image analysis. In Biogrid'05, proceedings of the IEEE/ACM International Symposium on Cluster Computing and the Grid, Cardiff, UK, May 2005.



27. [HADD-05d] R. Haddad, P. Clarysse, M. Orkisz, D. Revel, and I.E. Magnin. A Realistic Anthropomorphic Dynamic Heart Phantom. In Computers in Cardiology, Lyon, France, pages 801-804, 2005.



28. [HADD-05b] R. Haddad, P. Clarysse, M. Orkisz, D. Revel, and I.E. Magnin. A realistic anthropomorphic numerical model of the beating heart. In Functional Imaging and Modeling of the Heart, Barcelona, Spain, pages 384-393, 2005.



29. [HADD-05a] R. Haddad, P. Clarysse, M. Orkisz, D. Revel, and I.E. Magnin. Un modèle numérique anthropomorphique du coeur battant. In Forum de Recherche en Génie Biologique et Médical (JSTIM-FRGBM'05), volume 26, Nancy, France, pages 77-78, 2005.



30. [POUS-05] J. Pousin, Y. Rouchdy, M. Picq, J. Schaerer, and P. Clarysse. Constrained 3D elastic model for the segmentation in cardiac MRI. In Computers In Cardiology, Lyon, France, pages 785-788, 2005.



31. [SCHA-05] J. Schaerer, Y. Rouchdy, P. Clarysse, B. Hiba, P. Croisille, J. Pousin, and I.E. Magnin. Simultaneous Segmentation of the Left and Right Heart Ventricles in 3D Cine MR Images of Small Animals. In Computers In Cardiology, Lyon, France, pages 231-234, 2005.



32. [DELH-04] B. Delhay, P. Clarysse, P. Bonnet, P. Grangeat, and I.E. Magnin. Combined 3D object motion estimation in medical sequences. In International Conference on Image Processing, Singapore, Singapore, pages 1461-1464, 2004.



33. [MILL-04a] J. Milles, P. Clarysse, A. Van Susterens, P. Croisille, I.E. Magnin, and T. Arts. Automatic 2D segmentation of the left ventricle in tagged cardia MRI using motion. In IEEE International Symposium on Biomedical Imaging : From Nano to Macro, Arlington, VA, USA, 2004.



34. [POLL-04] M. Pollari, T. Lotjonen, T. Makela, N. Pauna, A. Reilhac, and P. Clarysse. Evaluation of cardiac PET-MRI registration methods using a numerical breathing phantom. In IEEE International Symposium on Biomedical Imaging (ISBI), Arlington, Vancouver, USA, pages 1447-1450, 2004.



35. [QIU-04] B. Qiu, P. Clarysse, J. Montagnat, M. Janier, and D. Vray. Comparison of 3D Deformable Models For in vivo Measurements of Mouse Embryo from 3D Ultrasound Images. In IEEE International Ultrasonics Symposium, Montréal, Canada, pages 748-751, 2004.



36. [MAKE-03b] T. Makela, M. Pollari, J. Lotjonen, N. Pauna, A. Reilhac, P. Clarysse, I.E. Magnin, and T. Katila. Evaluation and comparison of surface and intensity based rigid registration methods for thorax and cardiac MR and PET images. In Second International Workshop on Functional Imaging and Modeling of the Heart, volume 2674 of Lect Notes Comput Sc, Lyon, France, pages 224-233, 2003. Springer Verlag, Publ..



37. [PAUN-03] N. Pauna, P. Croisille, N. Costes, A. Reilhac, T. Makela, O. Cozar, M. Janier, and P. Clarysse. A Strategy to quantitatively evaluate MRI/PET cardiac rigid registration methods using a Monte Carlo simulator. In Proceedings of FIMH'03 (Second International Workshop on functional Imaging and Modeling of the Heart), volume 2674 of Lect Notes Comput Sc, Lyon, France, pages 194-204, 2003. Springer Verlag, Publ..



38. [ZHU-03] Y. M. Zhu, J.H. Luo, P. Clarysse, and I.E. Magnin. Correction des inhomogénéités d'intensité en IRM. In Conférences F. Lhermitte - 13e Rendez-Vous de l'ARSEP, Paris, France, pages 35, 2003.



39. [DYDE-02] I. Dydenko, S. Chehbi, D. Friboulet, P. Clarysse, I.E. Magnin, J. D'hooge, and B. Bijnens. Using an elastic deformable template for the segmentation of ultrasound cardiac radio frequency images based on the velocity information. In IEEE International Ultrasonics Symposium, Munich, Germany, pages 1706-1709, 2002.



40. [VRAY-02] D. Vray, A. Discher, J. Le Floc'h, W. Mai, P. Clarysse, Q.C. Pham, J. Montagnat, and M. Janier. 3D quantification of ultrasound images : application to mouse embryo imaging in vivo. In IEEE International Ultrasonics Symposium (UFFC), Munich, Germany, 2002.



41. [CLAR-01b] P. Clarysse, P. Croisille, L. Bracoud, and I.E. Magnin. Integrated quantitative analysis of tagged magnetic resonance images. In FIMH'01, volume 2230 of Lect Notes Comput Sc, Helsinki, Finland, pages 69-75, November 15-16 2001. Springer Verlag, Publ..



42. [CLAR-01a] P. Clarysse, C. Lavorel, A. Glière, P. Grangeat, and I.E. Magnin. Un modèle de thorax respirant pour l'évaluation d'algorithmes de reconstruction d'organes en mouvement par tomographie virtuelle. In GRETSI'01, Toulouse, France, 10-13 septembre 2001.



43. [MAKE-01a] T. Makela, P. Clarysse, J. Lotjonen, O. Sipila, K. Lauerma, H. Hanninen, J. Nenonen, J. Knuuti, T. Katila, and I.E. Magnin. A new method for the registration of cardiac PET and MR images using deformable model based segmentation of the main thorax structure. In Medical Image Computing and Computer Assisted Intervention (MICCAI'01), Utrecht, The Netherlands, pages 557-564, 2001.



44. [MAKE-01b] T. Makela, Q.C. Pham, P. Clarysse, J. Lotjonen, K. Laeuerma, H. Hanninen, J. Knuuti, T. Katila, and I.E. Magnin. A 3D model-based approach for the PET-functional and MR-anatomical cardiac imaging data fusion. In FIMH'01, volume 2230 of Lect Notes Comput Sc, Some City, Some Country, pages 83-90, November 15-16 2001. Springer Verlag, Publ..



45. [PHAM-01b] Q.C. Pham, F. Vincent, P. Clarysse, P. Croisille, and I.E. Magnin. A FEM-based deformable model for the 3D segmentation and tracking of the heart in cardiac MRI. In Some Congress, Pula, Croatia, pages 250-254, 2001.



46. [PHAM-01a] Q.C. Pham, F. Vincent, P. Clarysse, P. Croisille, and I.E. Magnin. Heart segmentation in MRI using a 3D prior biventricular deformable model. In Forum des Jeunes Chercheurs en GBM, Compiègne, France, pages 70-71, 5-6 Juin 2001.



47. [SARR-01b] M. Sarrut, S. Miguet, F. Vincent, P. Clarysse, M. Exbrayat, L. Brunie, M. Fleute, L. Desbat, and I.E. Magnin. Requêtes complexes et hybrides dans des bases d'images médicales distantes. Une illustration en imagerie cardiaque. In ASTI'2001, Paris, France, 24-27 mai 2001.



48. [CLAR-00b] P. Clarysse, D. Hans, P. Croisille, and I.E. Magnin. Exploratory analysis of the spatio-temporal deformation of the myocardium during systole from tagged MRI. In Biomedical Engineering Society Annual Meeting, Seattle, Washington, USA, 2000.



49. [VINC-00a] F. Vincent, P. Clarysse, P. Croisille, and I.E. Magnin. An elasticity-based model and its application to the estimation of the heart deformation in tagged MRI congres. In IEEE International Conference on Image Processing ICIP'00, volume 1 of IEEE Int Conf Imag Process, Vancouver, Canada, pages 629-632, 2000.



50. [VINC-00b] F. Vincent, P. Clarysse, P. Croisille, and I.E. Magnin. Segmentation of the heart from MR image sequences using a 3D active model. In Biomedical Engineering Society Annual Meeting, Seattle, Washington, USA, 2000.



51. [VINC-99] F. Vincent, P. Clarysse, P. Croisille, and I.E. Magnin. Segmentation et suivi de mouvement d'objets déformables par région active. In GRETSI 99, Vannes, France, pages 163-166, 1999.



52. [BENO-98] H. Benoit-Cattin, A. Planat, P. Joachimsmann, A. Baskurt, P. Clarysse, and I.E. Magnin. On the coding of active quadtree mesh. In IEEE International Conference on Image Processing ICIP'98, volume 2 of IEEE Int Conf Imag Process, Chicago, Illinois, USA, pages 895-898, 1998.



53. [HAN-98a] M. Han, P. Clarysse, P. Croisille, I.E. Magnin, and D. Revel. Aide à l'analyse de l'évolution spatio-temporelle de la déformation du myocarde. In 9ème Forum Jeunes Chercheurs GBM, Brest, France, May 14-15 1998.



54. [HAN-98c] M. Han, P. Clarysse, P. Croisille, I.E. Magnin, and D. Revel. Computer aided diagnosis of the myocardial ischemia based on a spatio-temporal deformation features analysis. In Computers In Cardiology, Cleveland, Ohio, USA, 1998.



55. [BOUD-97] A. Boudraa and P. Clarysse. Fast fuzzy gray level image segmentation method. In World Congress on Medical Physics and Biomedical Engineering, Nice, France, pages 686, 1997.



56. [CLAR-97c] P. Clarysse. Traitement d'image et infographie en imagerie du coeur. In Séminaire du LIGIM, Lyon, France, 1997.



57. [CLAR-97b] P. Clarysse, D. Friboulet, I.E. Magnin, and D. Revel. Suivi temporel de surfaces déformables - Application à la surface endocardique du VG. In VIème Colloque 'de la recherche à la découverte' section 22 du CNRS, Reims, France, 1997.



58. [CLAR-97e] P. Clarysse, P.J. Reissman, S. Lefebvre, O. Baudin, and D. Revel. Region-based segmentation of multislice and multiphase cardiac Magnetic Resonance Images. In World Congress on Medical Physics and Biomedical Engineering, Nice, France, pages 684, 1997.



59. [CLAR-97d] P. Clarysse, D. Revel, and I.E. Magnin. Segmentation d'images par résonance magnétique multi-phases et multi-coupes du coeur par une approche de régions déformables. In Rencontres Annuelles du Futuroscope 'les Techniques d'Imagerie Cardiovasculaire du Futur', Poitiers, France, 1997.



60. [CLAR-96] P. Clarysse. Recent and Future Trends in Cardiac Image Processing. In IEEE EMBS International Summer School on Biomedical Imaging, Ile de Berder, France, 1996.



61. [CLAR-95b] P. Clarysse, O. Jaouen, I.E. Magnin, and J.M. Morvan. Interpolation 3D des parois cardiaques à partir de données discrètes. In Jour. Thématiques GDR TdSI - GRAISHYM : Mouvement 3D d'objets non rigides, Lille, France, pages 4 pages, Mai 1995.



62. [CLAR-95a] P. Clarysse, F. Poupon, B. Barbier, and I.E. Magnin. 3D boundary extraction of the left ventricle by a deformable model with a priori information. In IEEE Int. Conf. Image Processing, Washington, USA, pages 492-495, October 1995.



63. [SOTT-95] F. Sottilini, P. Clarysse, J.P. Roux, D. Revel, and I.E. Magnin. LV myocardial wall motion estimation with tagged cine MRI (SPAMM). In Computers in Cardiology, Vienna, Austria, pages 529-532, 1995.



64. [CLAR-94c] P. Clarysse. Evolution temporelle de la courbure 3D des surfaces des parois cardiaques. In V Colloque'Thérapeutique et médicaments, de la recherche à la découverte', section 22 du CNRS, Montpellier, France, 1994.



65. [CLAR-94a] P. Clarysse, D. Friboulet, and I.E. Magnin. Time evolution analysis of differential features on 3D surfaces of the heart walls. In IEEE Medical Imaging Conf., Norfolk, USA, pages 1807-1811, 1994.



66. [CLAR-94b] P. Clarysse, O. Jaouen, I.E. Magnin, and J.M. Morvan. 3D representation and deformation analysis of the heart walls from X-ray and MR images. In Computers in Cardiology, Bethesda, USA, pages 657-660, 1994.



67. [GORC-94b] J.M. Gorce, D. Friboulet, P. Clarysse, and I.E. Magnin. Three dimensional velocity field estimation of moving cardiac walls. In Computers in Cardiology, Bethesda, USA, pages 489-492, 1994.



68. [CLAR-93a] P. Clarysse, D. Friboulet, and I.E. Magnin. Calcul de la courbure 3D des parois cardiaques en imagerie dynamique. In IVème Colloque 'Thérapeutique et Médicaments, de la recherche à la découverte', Section 22 du Comité National de la Recherche Scientifique, Strasbourg, France, 1993.



69. [CLAR-93b] P. Clarysse, D. Friboulet, and I.E. Magnin. Curvature assessment of the heart walls in 3D. Acquisition, segmentation, quantification. In Proc Computers in Cardiology, London, UK, pages 607-610, September 5-8 1993.

1. [CLAR-09] P. Clarysse. Analyse d'images cardiaques : de l'acquisition à la quantification. In Séminaire Modélisation, simulation et imagerie du myocarde, Laboratoire MAP5 (Université Paris Descartes) et action CardioSense3D (INRIA), Paris, 2009.



2. [CLAR-09a] P. Clarysse. Analyse d'images médicales et modélisation: de l'acquisition à la quantification. In Séminaire du GDR STIC-Santé, Thème F, Modélisation et simulation d'organes, Paris, 2009.



3. [CLAR-08b] P. Clarysse. Patient specific modeling and analysis of cardiac images. In Seminars of the Computer Vision Center, Universitat Autònoma de Barcelona, Barcelona, 2008.



4. [CLAR-03] P. Clarysse. Applications en imagerie cardio-vasculaire de la fusion d'images. In Journées de Recherche en Imagerie Médicale, Nantes, France, 2003.



5. [CLAR-97h] P. Clarysse, D. Revel, and I.E. Magnin. Segmentation d'images par résonance magnétique multi-phases et multi-coupes du coeur par une approche de régions déformable. In Rencontres Annuelles du Futuroscope 'les Techniques d'Imagerie Cardiovasculaire du Futur', Poitiers, France, 1997.

1. [GLAT-09c] T. Glatard, S. Camarasu-Pop, H. Benoit-Cattin, P. Clarysse, J. Montagnat, J. Moscicki, S. Olabarriaga, and D. Sarrut. Integrating pilot-jobs, workflows and virtual resource browser to foster medical image analysis on EGEE. EGEE User Forum, March 2009.



2. [SARR-01] M. Sarreau, S. Miguet, F. Vincent, P. Clarysse, M. Exbrayat, L. Brunie, M. Fleute, L. Desbat, and I.E. Magnin. Requêtes complexes et hybrides dans des bases d'images médicales distantes. Une illustration en imagerie cardiaque. ASTI'2001, 24-27 mai, Paris, France, 2001.



3. [CLAR-00c] P. Clarysse, D. Hans, P. Croisille, and I.E. Magnin. Exploratory analysis of the spatio-temporal deformation of the myocardium during systole from tagged MRI. Biomedical Engineering Society Annual Meeting, Seattle (Washington, USA), 2000.



4. [VINC-00c] F. Vincent, P. Clarysse, P. Croisille, and I.E. Magnin. Segmentation of the heart from MR image sequences using a 3D active model. Biomedical Engineering Society Annual Meeting, Seattle (Washington, USA), 2000.



5. [CLAR-97g] P. Clarysse. Traitement d'image et infographie en imagerie du coeur. Séminaire du LIGIM, Lyon, France, 1997.



6. [CLAR-97f] P. Clarysse, D. Friboulet, I.E. Magnin, and D. Revel. Suivi temporel de surfaces déformables - Application à la surface endocardique du VG. VIème Colloque 'de la recherche à la découverte' section 22 du CNRS, Reims, France, 1997.



7. [CLAR-96b] P. Clarysse. Recent and Future Trends in Cardiac Image Processing. 2nd IEEE EMBS International Summer School on Biomedical Imaging, Ile de Berder, France, 1996.



8. [CLAR-94d] P. Clarysse. Evolution temporelle de la courbure 3D des surfaces des parois cardiaques. V Colloque Thérapeutique et médicaments, de la recherche à la découverte, section 22 du CNRS, Montpellier, France, 1994.

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