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Publications of D. Sarrut
Dissertations/HDR
  1. [SARR-08b] D. Sarrut. Imagerie dynamique et simulations Monte-Carlo pour la radiothérapie guidée par l'image. H.D.R., Université Claude-Bernard Lyon I, 2008. Jury: Barillot C. (rap.), Malandain G. (rap.), Verellen D. (rap.), Buvat I., Deneve W., Peroche B. et Clarysse P.


Articles in journal
  1. [BROC-10] KK. Brock, Deformable Registration Accuracy Consortium, V. Boldea, and D. Sarrut. Results of a Multi-Institution Deformable Registration Accuracy Study (MIDRAS). Int J Radiat Onc, 76(2):583-596, February 2010.


  2. [CAMA-10] S. Camarasu-Pop, T. Glatard, J. T. Moscicki, H. Benoit-Cattin, and D. Sarrut. Dynamic partitioning of GATE Monte-Carlo simulations on EGEE. Journal of Grid Computing, 8(2):241-259, March 2010.


  3. [GREV-10] L. Grevillot, T. Frisson, N. Zahra, D. Bertrand, F. Stichelbaut, N. Freud, and D. Sarrut. Optimization of GEANT4 settings for Proton Pencil Beam Scanning simulations using GATE. Nucl Instr Meth Phys Res B, to appear, 2010.


  4. [SARR-10] D. Sarrut and J. Vandemeulebroucke. B-LUT: Fast and low memory B-spline image interpolation. Comput Meth Prog Bio, 99(2):172-178, August 2010.


  5. [VAN-10] J. Vandemeulebroucke, S. Rit, J. Kybic, P. Clarysse, and D. Sarrut. Spatio-Temporal Motion Estimation for Respiratory-Correlated Imaging of the Lungs. Med Phys, to appear, 2010.


  6. [ZAHR-10] N. Zahra, T. Frisson, L. Grevillot, P. Lautesse, and D. Sarrut. Influence of Geant4 parameters on dose distribution and computation time for carbon ion therapy simulation. Physica Medica: European Journal of Medical Physics, 26(4):202-206, October 2010.


  7. [FRIS-09] T. Frisson, N. Zahra, P. Lautesse, and D. Sarrut. Monte-Carlo based prediction of radiochromic film response for hadrontherapy dosimetry. Nucl Instr Meth Phys Res A, 606(3):749-754, July 2009.


  8. [RIT-09] S. Rit, D. Sarrut, and L. Desbat. Comparison of Analytic and Algebraic Methods for Motion-Compensated Cone-Beam CT Reconstruction of the Thorax. IEEE Trans Med Imaging, 28(10):1513-1525, 2009.


  9. [BOLD-08] V. Boldea, D. Sarrut, G. Sharp, and S. Jiang. 4D-CT lung motion models construction with deformable registration: estimation of motion nonlinearity and hysteresis. Med Phys, 35(3):1008-1018, 2008.


  10. [SARR-08] D. Sarrut and L. Guigues. Region-oriented CT image representation for reducing computing time of Monte Carlo simulations. Med Phys, 35(4):1452-1463, April 2008.


  11. [WU-2008] Z. Wu, E. Rietzel, V. Boldea, D. Sarrut, and G. Sharp. Evaluation of deformable registration of patient lung 4DCT with sub-anatomical region segmentations. Med Phys, 35(2):775-781, 2008.


  12. [SARR-07] D. Sarrut, B. Delhay, P.F. Villard, V. Boldea, M. Beuve, and P. Clarysse. A comparison framework for breathing motion estimation methods from 4D imaging. IEEE Trans Med Imaging, 26(12):1636-1648, 2007.


  13. [ATOU-06] H. Atoui, S. Miguet, and D. Sarrut. A Fast Morphing-Based Interpolation For Medical Images: Application To Conformal Radiotherapy. Image Anal Stereol, 25(2):95-103, June 2006.


  14. [RIT-06] S. Rit, D. Sarrut, V. Boldea, and C. Ginestet. Extraction du signal respiratoire à partir de projections cone-beam pour l'imagerie TDM 4D. Traitement du Signal, 23(3-4):307-319, 2006.


  15. [SARR-06c] D. Sarrut. Deformable Registration for Image-Guided Radiation Therapy. Zeitschrift für Medizinische Physik, 16:285-297, December 2006.


  16. [SARR-06a] D. Sarrut, V. Boldea, S. Miguet, and C. Ginestet. Simulation of 4D CT images from deformable registration between inhale and exhale breath-hold CT scans. Med Phys, 33(3):605-617, 2006.


  17. [SARR-06b] D. Sarrut, D. Perol, P. Pommier, and C. Carrie. Radiothérapie avec blocage respiratoire pour les grands insuffisants respiratoires atteints d'un carcinome pulmonaire non à petites cellules (Protocole RESPI 2000) : application à la modélisation des déformations d'organes par recalage déformable. Cancer/radiothérapie Elsevier, 10(6-7):377-380, 2006.


  18. [SARR-05] D. Sarrut, V. Boldea, M. Ayadi, J.N. Badel, C. Ginestet, and S. Clippe. Non-rigid registration method to assess reproducibility of breath-holding with ABC in lung cancer. Int J Radiat Oncol Biol Phys, 61(2):594-607, February 2005.


  19. [CLAR-04] P. Clarysse, F. Frouin, M. Garreau, A. Lalande, H. Rousseau, D. Sarrut, and C. Vasseur. Intégration de connaissances et modélisation en imagerie médicale. Innov Tech Biol Med - RBM, 25(3):139-149, 2004.


  20. [CLIPP-03] S. Clippe, D. Sarrut, C. Malet, S. Miguet, C. Ginestet, and C. Carrie. Patient setup error measurement using 3D intensity-based image registration techniques. Int J Radiat Oncol Biol Phys, 56(1):259-263, August 2003.


Communications Proceedings
  1. [VAND-09] J. Vandemeulebroucke, J. Kybic, P. Clarysse, and D. Sarrut. Respiratory motion estimation from cone-beam projections using a prior model. In Medical Image Computing and Computer-Assisted Intervention (MICCAI'09), London, UK, pages in-press, sept 2009. Springer.


  2. [FRIS-08] T. Frisson, N. Zahra, L. Grevillot, L. Guigues, and D. Sarrut. Extending GATE for dosimetry : radiotherapy and hadrontherapy applications.. In Proceedings of IEEE Nuclear Science Symposium and Medical Imaging Conference, Dresden, October 2008.


  3. [SERO-08] P. Seroul and D. Sarrut. VV: a viewer for the evaluation of 4D image registration. In In Medical Image Computing and Computer-Assisted Intervention MICCAI'2008, Workshop - Systems and Architectures for Computer Assisted Interventions, New York, September 2008.


  4. [VAND-08] J. Vandemeulebroucke, P. Clarysse, J. Kybic, and D. Sarrut. Estimating Respiratory Motion from Cone-Beam Projections. In In Medical Image Computing and Computer-Assisted Intervention MICCAI'2008, The First International Workshop on Pulmonary Image Analysis, New York, September 2008.


  5. [ZAHR-08] N. Zahra, T. Frisson, P. Lautesse, and D. Sarrut. Towards a new model of prediction of the optical density for radiochromic films using Monte-Carlo simulations for Carbon ion irradiation. In 47th PTCOG meeting (Particle Therapy Co-Operative Group), Jacksonville, US, May 2008.


  6. [BADE-07] J.N. Badel, D. Sarrut, and C. Ginestet. Prediction of portal dose images with Monte Carlo simulation for dosimetric control in radiotherapy. In International Conference on the Use of Computers in Radiation Therapy (ICCR), Toronto, Canada, June 2007.


  7. [BOLD-07] V. Boldea, G.C. Sharp, S.B. Jiang, and D. Sarrut. Lung motion modeling with deformable registration: non-linearity and hysteresis estimation and analysis. In International Conference on the Use of Computers in Radiation Therapy (ICCR), Toronto, Canada, June 2007.


  8. [RIT-07b] S. Rit, C. Ginestet, and D. Sarrut. Comparison of gated and dynamic cone-beam CT reconstruction methods. In International Conference on the Use of Computers in Radiation Therapy (ICCR), Toronto, Canada, June 2007.


  9. [RIT-07] S. Rit and D. Sarrut. Cone-beam projection of a deformable volume for motion compensated algebraic reconstruction. In Conf Proc IEEE Eng Med Biol Soc, Lyon, France, September 2007.


  10. [RIT-07c] S. Rit, D. Sarrut, and S. Miguet. Gated cone-beam CT imaging of the thorax: a reconstruction study. In SPIE Medical Imaging, San Diego, California, USA, February 2007.


  11. [VAND-07] J. Vandemeulebroucke, D. Sarrut, and P. Clarysse. Point-validated Pixel-based Breathing Thorax Model. In International Conference on the Use of Computers in Radiation Therapy (ICCR), Toronto, Canada, June 2007.


  12. [WU-07] Z. Wu, G. Sharp, E. Rietzel, V. Boldea, and D. Sarrut. Validation of deformable registration of lung 4DCT with anatomical sub-region segmentations. In International Conference on the Use of Computers in Radiation Therapy (ICCR), Toronto, Canada, June 2007.


  13. [ZAHR-07] N. Zahra, P. Lautesse, L. Guigues, T. Frisson, and D. Sarrut. Geant4-based simulation of Carbon beam irradiation inside CT image : validation with radiochromic films. In 11th HCBPM (Heavy Charged Particles in Biology & Medicine) IBIBAM (Ion Beams In Biology and Medicine), Heidelberg, September 2007.


  14. [AYAD-06] M. Ayadi, D. Sarrut, and C. Ginestet. Cumulating static dose distributions to simulate dynamic dose distributions: an experimental study. In Med. Phys. 48th AAPM (American Association of Physicists in Medicine) Annual Meeting, volume 33, Orlando, FL, USA, pages 2084, June 2006.


  15. [BADE-06] J.N. Badel, C. Ginestet, N. Dufour, and D. Sarrut. Monte Carlo simulations of the transit dose from amorphous silicon electronic portal images. In The 9th International Workshop on Electronic Portal Imaging, Melbourne, Australia, 2006.


  16. [BOLD-06] V. Boldea, G. Sharp, S. Jiang, N. Choi, C. Ginestet, C. Carrie, and D. Sarrut. Implementation and Evaluation of Automatic Contour Propagation in 4DCT of Lung. In Med. Phys. 48th AAPM (American Association of Physicists in Medicine) Annual Meeting, volume 33, Orlando, FL, USA, pages 2019-2020, June 2006.


  17. [DUFO-06] N. Dufour, L. Guigues, M. Boutemeur, and D. Sarrut. Monte Carlo Simulation Platform for the External Techniques of Treatment of Cancer. In 1st European Conf. on Molecular Imaging Technology (EUROMEDIM'06), Marseille, France, May 2006.


  18. [GUIG-06a] L. Guigues, D. Sarrut, N. Dufour, M.C. Ricol, E. Testa, M. Boutemeur, N. Freud, and J.M. Letang. A Platform for Monte Carlo Simulation of Cancer Therapy with Photon and Light Ions Beams based on the Geant 4 Toolkit. In IEEE Nuclear Sciences Symposium, San Diego, USA, October 2006.


  19. [GUIG-06b] L. Guigues, D. Sarrut, N. Dufour, M.C. Ricol, E. Testa, M. Boutemeur, N. Freud, and J.M. Letang. ThIS : A Geant4-based Therapeutic Irradiation Simulator. In 1st European Workshop on Monte Carlo Treatment Planning (MCTP), Gent, Belgium, October 2006.


  20. [BOLD-05] V. Boldea, D. Sarrut, and C. Carrie. Comparison of 3D Dense Deformable Registration Methods for Breath-hold Reproducibility Study in Radiotherapy. In SPIE Medical Imaging: Visualization, Image-Guided Procedures, and Display, volume 5747, pages 222-230, 2005.


  21. [RIT-05] S. Rit, D. Sarrut, and C. Ginestet. Respiratory signal extraction for 4D CT imaging of the thorax from cone-beam CT projections. In J.S. Duncan and G. Gerig, editors, Medical Image Computing and Computer-Assisted Intervention (MICCAI), volume 3749, pages 556-63, 2005. Springer Verlag, Lecture Notes in Computer Science.


  22. [ATOU-04] H. Atoui, D. Sarrut, and S. Miguet. Usefulness of image morphing techniques in cancer treatment by conformal radiotherapy. In SPIE Medical Imaging: Visualization, Image-Guided Procedures, and Display, volume 5367, pages 332-340, 2004.


  23. [BOLD-03] V. Boldea, D. Sarrut, and S. Clippe. Lung Deformation Estimation with Non-Rigid Registration for Radiotherapy Treatment. In Medical Image Computing and Computer-Assisted Intervention (MICCAI), volume 2878, pages 770-7, 2003. Springer Verlag, Lecture Notes in Computer Science.


  24. [SARR-01a] D. Sarrut and S. Clippe. Geometrical transformation approximation for 2D/3D intensity-based registration of portal images and CT scan. In W.J. Niessen and M.A. Viergever, editors, Medical Image Computing and Computer-Assisted Intervention (MICCAI), volume 2208, Utrecht (Netherlands), pages 532-540, 2001. Springer Verlag, Lecture Notes in Computer Science.


Miscellaneous
  1. [CAMA-09] S. Camarasu-Pop, H. Benoit-Cattin, J. Moscicki, D. Sarrut, and T. Glatard. Results and evaluation of ThIS on grid. EGEE User Forum, March 2009.


  2. [CAMA-09a] S. Camarasu-Pop, D. Sarrut, H. Benoit-Cattin, and T. Glatard. GATE-Lab. EGEE Conference, Sept 2009.


  3. [GLAT-09c] T. Glatard, S. Camarasu-Pop, H. Benoit-Cattin, P. Clarysse, J. Montagnat, J. Moscicki, S. Olabarriaga, and D. Sarrut. Integrating pilot-jobs, workflows and virtual resource browser to foster medical image analysis on EGEE. EGEE User Forum, March 2009.


  4. [CAMA-08d] S. Camarasu Pop, L. Guigues, H. Benoit-Cattin, and D. Sarrut. ThIS on the Grid. 3rd EGEE User Forum, February 2008.


  5. [CAMA-08c] S. Camarasu-Pop, H. Benoit-Cattin, L. Guigues, and D. Sarrut. Porting ThIS on the EGEE grid. EGEE'08 Conference, Sept 2008.



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