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Publications of S. Cavassila
Book chapters
  1. [SUVI-10] A. Suvichakorn, H. Ratiney, S. Cavassila, and J.P. Antoine. Wavelet-based techniques in Magnetic Resonance Spectroscopy. In Recent Advances in Signal Processing, pages (in-press). IN-TECH A. Lazinica, editor. 2010.


  2. [GRAV-02] S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Cramér-Rao Bound Analysis of Spectroscopic Signal Processing Methods. In Signal Processing for Magnetic Resonance Imaging and Spectroscopy, chapter 22. Y. Hong, editor. Marcel Dekker, Publ., 2002.


  3. [DE-B-95] R. de Beer, D. van Ormondt, F. T. A. W. Wajer, S. Cavassila, D. Graveron-Demilly, and S. Van Huffel. SVD-Based modelling of medical NMR signals. In SVD and Signal Processing III Algorithms, Architectures and Applications, chapter 48, pages 467-474. M. Moonen and B. De Moor, editors. Elsevier, Publ., 1995.


Dissertations/HDR
  1. [CAVA-06] S. Cavassila. Traitement du Signal et Méthodologie pour la Spectrométrie de Résonance Magnétique. H.D.R., Université Claude-Bernard Lyon 1, 2006. Jury: J. Duchène (rap.), I.E. Magnin (rap.), C. Remy (rap.), A. Briguet, D. Graveron-Demilly, H. Saint-Jalmes, D. van Ormondt.


Thesis
  1. [CAVA-96] S. Cavassila. Méthodes de Traitement du Signal appliquées à la Spectroscopie et à l'Imagerie Spectroscopique par Résonance Magnétique. Doctorat, Université Claude Bernard Lyon 1, 1996. Jury: A. Briguet, C. Segebarth (rap.), D. Graveron-Demilly (dir.), D. van Ormondt (rap.), G. Gilles, P. Cozzone.


Articles in journal
  1. [MUTE-10] E. Mutel, A. Abdul-Wahed, N. Ramamonjisoa, A. Stefanutti, I. Houberdon, S. Cavassila, F. Pilleul, O. Beuf, A. Gautier-Stein, A. Penhoat, G. Mithieux, and F. Rajas. Targeted deletion of liver glucose-6 phosphatase mimics glycogen storage disease type 1a including development of multiple adenomas. J Hepatol, pp in-press, 2010.


  2. [CUDA-09] C. Cudalbu, O. Beuf, and S. Cavassila. In vivo short echo time localized 1H MRS of the rat brain at 7T: influence of two strategies of background-accommodation on the metabolite concentration estimation using QUEST. J Signal Proces Syst, 55:25-34, 2009.


  3. [SUVI-09] A. Suvichakorn, H. Ratiney, A. Bucur, S. Cavassila, and Antoine J.P.. Toward a quantitative analysis of in vivo proton magnetic resonance spectroscopic signals using the continuous Morlet wavelet transform. Meas Sci Technol, 20:104029, 2009.


  4. [CUDA-08] C. Cudalbu, S. Cavassila, H. Rabeson, D. van Ormondt, and D. Graveron-Demilly. Influence of measured and simulated basis sets on metabolite concentration estimates.. Nuclear Magnetic Resonance in Biomedicine, 21:627-636, 2008.


  5. [CUDA-08f] C. Cudalbu, A. Montavont, P. Ryvlin, and S. Cavassila. Brain metabolite concentration estimates using Magnetic Resonance Spectroscopy in a chronic model of temporal lobe epilepsy. C R Chimie, 11(4-5):434-441, 2008.


  6. [CUDA-08a] C. Cudalbu, A. Rengle, O. Beuf, and S. Cavassila. Rat brain metabolite relaxation time estimates using Magnetic Resonance Spectroscopy at two different field strengths. C R Chimie, 11:442-447, 2008.


  7. [RABE-07a] H. Rabeson, H. Ratiney, F. Fauvelle, C. Cudalbu, S. Cavassila, A. Bernard, P. Giraudon, D. van Ormondt, and D. Graveron-Demilly. Quantitation for in vivo and ex vivo NMR Spectroscopy. J Optoelectron Adv M, 9:505-511, 2007.


  8. [CUDA-06g] C. Cudalbu, S. Cavassila, H. Ratiney, D. Grenier, A. Briguet, and D. Graveron-Demilly. Estimation of metabolite concentrations of healthy mouse brain by magnetic resonance spectroscopy at 7 T. C R Chimie, 9:534-538, 2006.


  9. [RATI-05] H. Ratiney, M. Sdika, Y. Coenradie, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Time-Domain Semi-Parametric Estimation Based on a Metabolite Basis Set. Nuclear Magnetic Resonance in Biomedicine, 18:1-13, 2005.


  10. [RATI-04] H. Ratiney, Y. Coenradie, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Time-Domain Quantitation of 1H Short Echo-Time Signals: Background Accommodation. Magn Reson Mater Phy Biol Med, 16(6):284-296, May 2004.


  11. [CAVA-01] S. Cavassila, S. Deval, C. Huegen, D. van Ormondt, and D. Graveron-Demilly. Cramér-Rao bounds: A tool for quantitation objectives. NMR Biomed, 14:278-283, 2001.


  12. [CAVA-00a] S. Cavassila, S. Deval, C. Huegen, D. van Ormondt, and D. Graveron-Demilly. Cramér-Rao bound expressions for parametric estimation of overlapping spectral components. Influence of prior knowledge. J Magn Reson, 143:311-320, 2000.


  13. [CAVA-99] S. Cavassila, S. Deval, C. Huegen, D. van Ormondt, and D. Graveron-Demilly. The Beneficial Influence of prior knowledge on the Quantitation of in vivo Magnetic Resonance Spectroscopy Signals. Invest Radiol, 34(3):242-246, 1999.


  14. [GRAV-99] D. Graveron-Demilly, G.J. Marseille, Y. Crémillieux, S. Cavassila, and D. van Ormondt. SRS-FT: A Fourier Imaging Method based on sparse radial scanning and bayesian estimation. J Magn Reson, B112:119-123, 1999.


  15. [CAVA-97] S. Cavassila, B. Fenet, A. van den Boogaart, C. Rémy, A. Briguet, and D. Graveron-Demilly. ER-Filter: a preprocessing technique for frequency-selective time-domain analysis. Magn Reson Anal, 3:87-92, 1997.


Communications Proceedings
  1. [LEPO-10a] B. Leporq, H. Ratiney, S. Cavassila, F. Pilleul, and O. Beuf. Fat content quantification errors using multiple gradient echo imaging: A phantom and simulation study. In ISMRM-ESMRMB Joint Annual Meeting, Stockholm, Sweden, 1-7 May 2010.


  2. [RAMA-10a] N. Ramamonjisoa, H. Ratiney, F. Rajas, E. Mutel, F. Pilleul, O. Beuf, and S. Cavassila. In vivo hepatic localized proton magnetic resonance spectroscopy at 7T in a glycogen storage disease mouse model. In ISMRM-ESMRMB Joint Annual Meeting, Stockholm,Sweden, 1-7 May 2010.


  3. [RATI-10a] H. Ratiney, Y. Le Fur, M. Sdika, and S. Cavassila. Short Echo Time H1 Chemical Shift Imaging data quantification in the mouse brain at 11.7T using a constrained parametric macromolecular model. In ISMRM-ESMRMB Joint Annual Meeting, Stockholm,Sweden, 2010.


  4. [ROUS-10a] T. Roussel, S. Cavassila, and H. Ratiney. Sampling strategy effects on in vivo 2D J-Resolved spectroscopy quantification. In ISMRM-ESMRMB Joint Annual Meeting, Stockholm,Sweden, 2010.


  5. [BUCU-09a] A. Bucur, H. Ratiney, O. Beuf, F. Pilleul, and S. Cavassila. Beyond lipid quantification of in vivo clinical hepatic 1.5T 1H MRS signals. In ESMRMB, Antalya,Turkey, pages 732, 2009.


  6. [BUCU-09] A. Bucur, H. Ratiney, O. Beuf, F. Pilleul, and S. Cavassila. On the use of internal reference for in vivo Magnetic Resonance Spectroscopy in the liver. In ESMRMB, Antalya,Turkey, pages 729, 2009.


  7. [CAVA-09] S. Cavassila, H. Ratiney, A. Bucur, F. Pilleul, and O. Beuf. Lineshape Pertinence in in vivo hepatic 1H Magnetic Resonance Spectroscopic data fitting. In ESMRMB, Antalya,Turkey, pages 695, 2009.


  8. [MUTE-09] E. Mutel, N. Ramamonjisoa, A. Abdul-Wahed, I. Houberdon, S. Cavassila, F. Pilleul, G. Mithieux, O. Beuf, and F. Rajas. Développement adénomes hépatiques dans un modèle de glycogénose de type 1a. In 65ème journée de Association Française pour Etude du Foie, Paris, France, 2009.


  9. [RATI-09a] H. Ratiney, Y. Le Fur, M. Sdika, M. Touret, A. Bernard, and S. Cavassila. Quantitative assessment of the brain macromolecular content in a mouse model of neuro-inflammation from chemical shift imaging data at 11.7T. In ESMRMB, Antalya,Turkey, pages 39, 2009.


  10. [RATI-09] H. Ratiney, M. Sdika, O. Beuf, Y. Le Fur, and S. Cavassila. Towards structure specific macromolecular content of mouse brain from Chemical Shift Imaging data at 11.7T. In ISMRM, Hawai, USA, pages 3293, April 2009.


  11. [RENG-09a] A. Rengle, H. Ratiney, S. Cavassila, and O. Beuf. Simultaneous two-channel mice brain chemical shift imaging using a standard Biospec spectrometer. In ISMRM, Hawai, USA, pages 2347, April 2009.


  12. [ROUS-09a] T. Roussel, S. Cavassila, and H. Ratiney. Novel quantification strategy for in vivo 2D J-Resolved spectroscopy. In ESMRMB, Antalya,Turkey, pages 119, 2009.


  13. [ROUS-09] T. Roussel, H. Ratiney, and S. Cavassila. MRS 2D quantification vs 1D quantification. In ISMRM, Hawai, USA, pages 2398, April 2009.


  14. [BUCU-08a] A. Bucur, A. Bernard, C. Cudalbu, P. Giraudon, D. Graveron-Demilly, H. Ratiney, and S. Cavassila. Analyse quantitative des altérations métaboliques chez un modèle murin de neuro-inflammation par SRM. In 12ème Congrès du GRAMM, Lyon, France, 2008.


  15. [BUCU-08] A. Bucur, A. Bernard, C. Cudalbu, P. Giraudon, D. Graveron-Demilly, H. Ratiney, and S. Cavassila. Quantitative analysis of metabolic Alterations in a mouse model of Neuro-inflammation using In vivo MR Spectroscopy. In International Society of Magnetic Resonance in Medicine, Toronto, Canada, pages 2179, April 2008.


  16. [CAVA-08a] S. Cavassila, A. Bucur, H. Ratiney, C. Cudalbu, O. Beuf, and F. Pilleul. Quantification de la stéatose hépatique par Spectroscopie de Résonance Magnétique et Imagerie en phase et opposition de phase. In 12ème Congrès du GRAMM, Lyon, France, 2008.


  17. [CAVA-08] S. Cavassila, A. Bucur, H. Ratiney, C. Cudalbu, O. Beuf, and F. Pilleul. Quantification of the hepatic fatty infiltration and the metabolite concentrations using Magnetic Resonance Spectroscopy and in and out of phase Imaging. In International Society of Magnetic Resonance in Medicine, Toronto, Canada, pages 712, April 2008.


  18. [MENN-08a] N. Mennesson, J. Dumortier, S. Cavassila, O. Beuf, J.Y. Scoazec, and F. Pilleul. Liver steatosis quantification using MRI: a prospective comparative study with liver biopsy. In International Society of Magnetic Resonance in Medicine, Toronto, Canada, pages 3714, April 2008.


  19. [RATI-08b1] H. Ratiney, A. Bucur, C. Cudalbu, and S. Cavassila. Estimation d'une mixture de gaussiennes par l'algorithme d'Espérance-Maximisation pour la modélisation des signaux de macromolécules acquis par inversion-récupération. In 12ème Congrès du GRAMM, Lyon, France, 2008.


  20. [RATI-08a1] H. Ratiney, A. Bucur, C. Cudalbu, and S. Cavassila. Gaussian mixture model Estimation using the Expectation Maximization algorithm for MRS inversion-recovery signals. In International Society of Magnetic Resonance in Medicine, Toronto, Canada, pages 1625, April 2008.


  21. [RATI-08c] H. Ratiney, A. Bucur, M. Sdika, O. Beuf, F. Pilleul, and S. Cavassila. Effective Voigt model estimation using multiple random starting values and parameter bounds settings for in vivo hepatic 1H Magnetic Resonance Spectroscopy data. In IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Paris, France, pages 1529-1532, 2008.


  22. [RATI-08d] H. Ratiney, G. Da Costa, V. Metzinger, P. Eliat, S. Cavassila, and H. Saint Jalmes. Automatic Quantitative analysis of HRMAS 1D proton spectra from rat liver biopsies. In European Society of Magnetic Resonance in Medicine and Biology, Valencia, Spain, 2008.


  23. [RENG-08d] A. Rengle, H. Ratiney, A. Bucur, S. Cavassila, and O. Beuf. Re-configuration of a 'standard' Biospec spectrometer for simultaneous 2-channel acquisitions: Application for mouse brain MRI and MRS. In IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Paris, France, pages 432-435, 2008.


  24. [RENG-08] A. Rengle, H. Ratiney, A. Bucur, S. Cavassila, and O. Beuf. Reconfiguration of a 'standard' Biospec spectrometer for simultaneous 2-channel acquisitions: Application for mouse brain MRI and MRS. In International Society of Magnetic Resonance in Medicine, Toronto, Canada, pages 1133, April 2008.


  25. [SUVI-08c] A. Suvichakorn, H. Ratiney, A. Bucur, S. Cavassila, and J.P. Antoine. Analyzing magnetic resonance spectroscopic signals with macromolecular contamination by the Morlet wavelet. In Conf Proc IEEE European Congress for Medical and Biomedical Engineering, Antwerp, Belgium, pages 163-166, 2008.


  26. [SUVI-08a] A. Suvichakorn, H. Ratiney, A. Bucur, S. Cavassila, and J.P. Antoine. Morlet Wavelet Analysis of Magnetic Resonance Spectroscopic Signals with Macromolecular Contamination. In IEEE International Workshop on Imaging Systems and Techniques, Chania, Greece, pages 321-325, 2008.


  27. [SUVI-08b] A. Suvichakorn, H. Ratiney, A. Bucur, S. Cavassila, and J.P. Antoine. Quantification Method using the Morlet Wavelet for Magnetic Resonance Spectroscopic Signals with Macromolecular Contamination. In Conf Proc IEEE Eng Med Biol Soc, Vancouver, Canada, pages 2681-2684, 2008.


  28. [CUDA-07d] C. Cudalbu, A. Bucur, D. Graveron-Demilly, O. Beuf, and S. Cavassila. Comparison of two strategies of background-accommodation: Influence on the metabolite concentration estimation from in vivo Magnetic Resonance Spectroscopy data. In Conf Proc IEEE Eng Med Biol Soc, volume 1, Lyon, France, pages 2077-2080, 2007.


  29. [CUDA-07] C. Cudalbu, S. Cavassila, H. Rabeson, D. van Ormondt, and D. Graveron-Demilly. Influence of the background-handling strategy on the metabolite concentration estimates. In International Society of Magnetic Resonance in Medicine - European Society of Magnetic Resonance in Medicine and Biology, Berlin, Germany, pages 3170, May 2007.


  30. [CUDA-07c] C. Cudalbu, A. Montavont, P. Ryvlin, and S. Cavassila. Brain metabolite concentration estimates using Magnetic Resonance Spectroscopy in a chronic model of temporal lobe epilepsy. In GERM, Alénya, France, pages 46, Mars 2007.


  31. [CUDA-07b] C. Cudalbu, A. Rengle, O. Beuf, and S. Cavassila. Rat brain metabolite relaxation time estimates using Magnetic Resonance Spectroscopy at two different field strengths. In GERM, Alénya, France, pages 47, Mars 2007.


  32. [CUDA-07a] C. Cudalbu, A. Rengle, A. Bucur, O. Beuf, and S. Cavassila. In Vitro and In Vivo Relaxation Times of N-acetylaspartate, Creatine and Choline at 4.7T and 7T. In International Society of Magnetic Resonance in Medicine - European Society of Magnetic Resonance in Medicine and Biology, Berlin, Germany, pages 2924, May 2007.


  33. [CUDA-06b] C. Cudalbu, S. Cavassila, O. Beuf, H. Rabeson, D. van Ormondt, and D. Graveron-Demilly. Estimated metabolite concentrations in the rat brain with QUEST: A comparison between in vitro and in simulated basis-sets. In Int. Soc. Magnetic Resonance in Medicine, 14th Scientific Meeting and Exhibition, Seattle, Washington, USA, pages 2533, May 2006.


  34. [CUDA-06c] C. Cudalbu, S. Cavassila, A. Montavont, P. Ryvlin, A. Briguet, and D. Graveron-Demilly. Study of pilocarpine model of epileptic rats at 7 telas by Magnetic Resonace Spectroscopy. In Int. Soc. Magnetic Resonance in Medicine, 14th Scientific Meeting and Exhibition, Seattle, Washington, USA, pages 2530, May 2006.


  35. [CUDA-06d] C. Cudalbu, S. Cavassila, H. Rabeson, D. van Ormondt, and D. Graveron-Demilly. Localized Proton Magnetic Resonance Spectroscopy at 7 Tesla in the Rat Brain: Metabolite Concentration Estimates Using QUEST and Two Approaches to Accommodate the Background. In Proc. ProRISC, IEEE Benelux, Veldhoven, The Netherlands, pages 136-140, November 2006.


  36. [CUDA-06a] C. Cudalbu, S. Cavassila, H. Ratiney, O. Beuf, A. Briguet, and D. Graveron-Demilly. A longitudinal study of pilocarpine model of epileptic rats at 7 Tesla by Magnetic Resonance Spectroscopy. In European Society for Magnetic Resonance in Medicine and Biology, 23rd Annual Scientific Meeting ESMRMB, Warsaw, Poland, pages 267, September, 21-23 2006.


  37. [RABE-06c] H. Rabeson, F. Fauvelle, H. Ratiney, C. Cudalbu, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Quantitation with QUEST of ER-Filtered HRMAS-NMR Signals. In Proc. ProRISC, IEEE Benelux, Veldhoven, The Netherlands, pages 171-175, November 2006.


  38. [RABE-06a] H. Rabeson, F. Fauvelle, H. Ratiney, C. Cudalbu, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Quantitation with QUEST of ER-Filtered HRMAS-NMR signals. In ISMRM Workshop on Data Processing for MR Spectroscopy and Imaging, Warrenton, Virginia, USA, November 2006.


  39. [RABE-06d] H. Rabeson, F. Fauvelle, H. Ratiney, C. Cudalbu, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Quantitation with QUEST of HRMAS-NMR Signals in the Presence of a Background. In European Society for Magnetic Resonance in Medicine and Biology, 23rd Annual Scientific Meeting ESMRMB, Warsaw, Poland, pages 180, September, 21-23 2006.


  40. [RABE-06e] H. Rabeson, H. Ratiney, C. Cudalbu, S. Cavassila, E. Capobianco, R. de Beer, D. van Ormondt, and D. Graveron-Demilly. Signal Disentanglement in In Vivo MR Spectroscopy: By Semi-Parametric Processing or by Measurement?. In Proc. ProRISC, IEEE Benelux, Veldhoven, The Netherlands, pages 176-183, November 2006.


  41. [CUDA-05c] C. Cudalbu, S. Cavassila, D. Grenier, H. Ratiney, A. Briguet, and D. Graveron-Demilly. Estimation des temps de relaxation in vivo des métabolites cérébraux chez le rat à 7 Teslas. In GRAMM, Nancy, France, pages 14, 21-23 Mars 2005.


  42. [CUDA-05e] C. Cudalbu, S. Cavassila, D. Grenier, H. Ratiney, A. Briguet, and D. Graveron-Demilly. In vivo metabolite relaxation times in mouse and rat brains at 7 Teslas. In Int. Soc. Magnetic Resonance in Medicine, 13th Scientific Meeting and Exhibition, Miami, Florida, USA, pages 2476, May 7-13 2005.


  43. [CUDA-05d] C. Cudalbu, S. Cavassila, H. Ratiney, O. Beuf, A. Briguet, and D. Graveron-Demilly. Application de l'algorithme QUEST à la quantification des métabolites cérébraux de la souris à 7 Teslas. In XIX Congrès du GERM, Carry le Rouet, France, pages 102, Avril 2005.


  44. [CUDA-05a] C. Cudalbu, S. Cavassila, H. Ratiney, O. Beuf, A. Briguet, and D. Graveron-Demilly. Localized proton MRS at 7 Tesla in the rat brain : Estimated metabolite concentrations and T2 relaxation times (ePoster). In European Society for Magnetic Resonance in Medicine and Biology, 22nd Annual Scientific Meeting ESMRMB, Basel, Switzerland, pages 207, 15-18 September 2005.


  45. [CUDA-05b] C. Cudalbu, S. Cavassila, H. Ratiney, O. Beuf, A. Briguet, and D. Graveron-Demilly. Metabolite concentrations of Healthy mouse brain By Magnetic Resonance Spectroscopy at 7 Tesla. In Conf Proc IEEE Eng Med Biol Soc, volume 2, Shangai, R.P. China, pages 1392-1395, 1-4 September 2005.


  46. [CUDA-05] C. Cudalbu, S. Cavassila, H. Ratiney, O. Beuf, D. van Ormondt, and D. Graveron-Demilly. Metabolite concentration estimates in the rat brain by Magnetic Resonance Spectroscopy using QUEST and two approaches to invoke prior knowledge. In Proc. ProRISC, IEEE Benelux, Veldhoven, The Netherlands, pages 609-614, 17-18 November 2005.


  47. [RATI-05d] H. Ratiney, E. Capobianco, M. Sdika, H. Rabeson, C. Cudalbu, S. Cavassila, R. de Beer, D. van Ormondt, and D. Graveron-Demilly. Semi-Parametric estimation in In vivo MR Spectroscopy. In ProRISC, IEEE Benelux, Veldhoven, The Netherlands, pages 658-667, 17-18 November 2005.


  48. [RATI-05c] H. Ratiney, H. Rabeson, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Quantification de données d'Imagerie Spectroscopique en présence d'effets de susceptibilité. In GRAMM, Nancy, pages 35, 21-23 Mars 2005.


  49. [RATI-05e] H. Ratiney, H. Rabeson, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Quantitation of MRSI Data in the Presence of Magnetic Susceptibility Effects. In Int. Soc. Magnetic Resonance in Medicine, 13th Scientific Meeting and Exhibition, Miami, Florida, USA, pages 2472, May 7-13 2005.


  50. [LEN-05b] B. Tchong Len, H. Ratiney, C. Cudalbu, B. Fenet, S. Cavassila, A.R. Allouche, M. Aubvert-Frécon, D. van Ormondt, and D. Graveron-Demilly. Edition et Quantification du GABA. In GRAMM, Nancy, France, pages 17, 21-23 Mars 2005.


  51. [LEN-05c] B. Tchong Len, H. Ratiney, C. Cudalbu, B. Fenet, S. Cavassila, A. R. Allouche, M. Aubvert-Frécon, D. van Ormondt, and D. Graveron-Demilly. Edition et Quantification du GABA en Spectrométrie de Résonance Magnétique. In XIX Congrès du GERM, Carry le Rouet, France, pages 103, 21-23 Mars 2005.


  52. [LEN-05] B. Tchong Len, H. Ratiney, C. Cudalbu, B. Fenet, S. Cavassila, A.R. Allouche, M. Aubvert-Frécon, D. van Ormondt, and D. Graveron-Demilly. Quantitation of Edited GABA Signals. In Int. Soc. Magnetic Resonance in Medicine, 13th Scientific Meeting and Exhibition, Miami, Florida, USA, pages 2761, May 2005.


  53. [CUDA-04a] C. Cudalbu, S. Cavassila, D. Grenier, H. Ratiney, A. Briguet, and D. Graveron-Demilly. In vitro and in vivo relaxation times of choline, creatine and N-acetylaspartate at 7 teslas. In European Society for Magnetic Resonance in Medicine and Biology, 21st Annual Scientific Meeting ESMRMB, Copenhagen, Denmark, pages 337, 9-12 September 2004.


  54. [CUDA-04b] C. Cudalbu, S. Cavassila, D. Grenier, H. Ratiney, A. Briguet, and D. Graveron-Demilly. Time-domain quantitation of 1H short echo time Magnetic Resonance signals at 7 teslas. In European Society for Magnetic Resonance in Medicine and Biology, 21st Annual Scientific Meeting ESMRMB, Copenhagen, Denmark, pages 344, 9-12 September 2004.


  55. [RATI-04c] H. Ratiney, Y. Coenradie, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Extended Cramér Rao Lower Bounds: Background Accomodation. In 12th Scientific Meeting and Exhibition of the International Society of Magnetic Resonance in Medicine, ISMRM2004, Kyoto, Japan, pages 306, 15-21 May 2004.


  56. [RATI-04b] H. Ratiney, Y. Coenradie, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Untangling the background from the metabolites in the time-domain. In European Society for Magnetic Resonance in Medicine and Biology, 21st Annual Scientific Meeting ESMRMB, Copenhagen, Danemark, pages 180, 9-12 September 2004.


  57. [RATI-03d] H. Ratiney, Y. Coenradie, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Quantification dans le domaine temporel de signaux de spectroscopie à l'aide d'une base de métabolites. In Groupe de Recherche sur les Applications du Magnétisme en Médecine, GRAMM, Angers, France, Février 2003.


  58. [RATI-03e] H. Ratiney, Y. Coenradie, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Semiparametric Estimation for Metabolomics. In ProRISC, IEEE Benelux, Veldhoven, The Netherlands, pages 418-426, November 2003.


  59. [RATI-03c] H. Ratiney, Y. Coenradie, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Time domain quantation of 1H short echo time: Background Accomodation. In European Society for Magnetic Resonance in Medicine and Biology, 20th Annual Scientific Meeting ESMRMB, Rotterdam, The Netherlands, pages 328, 15-21 May 2003.


  60. [RATI-03a] H. Ratiney, Y. Coenradie, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Time-Domain Quantitation with a Metabolite Basis Set. In Int. Soc. Magnetic Resonance in Medicine, 11th Scientific Meeting and Exhibition, Toronto, Canada, pages 1161, July 2003.


  61. [CAVA-02] S. Cavassila, D. Grenier, O. Beuf, and D. Graveron-Demilly. Estimation of intrinsic transverse relaxation times by echo time-domain quantitation. In International Society of Magnetic Resonance in Medicine Scientific Meeting, Honolulu, USA, pages 1947, 18-24 May 2002.


  62. [COEN-02a] Y. Coenradie, R. de Beer, D. van Ormondt, S. Cavassila, H. Ratiney, and D. Graveron-Demilly. Background-signal parametrization in in vivo MR spectroscopy. In European Society for Magnetic Resonance in Medicine and Biology, 19th Annual Meeting, Cannes, France, pages 369, 2002.


  63. [COEN-02b] Y. Coenradie, R. de Beer, D. van Ormondt, H. Ratiney, S. Cavassila, and D. Graveron-Demilly. Background-signal parametrization in In Vivo MR Spectroscopy. In ProRISC, IEEE Benelux, Veldhoven, The Netherlands, pages 248-254, November 2002.


  64. [RATI-02b] H. Ratiney, F. Mitri, Y. Coenradie, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. QUEST : Time-Domain Quantitation with advanced prior knowledge. In European Society for Magnetic Resonance in Medicine and Biology,19th Annual Meeting, Cannes, France, pages 373, November 2002.


  65. [RATI-02a] H. Ratiney, F. Mitri, Y. Coenradie, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. QUEST: Time-Domain Quantitation with Advanced Prior Knowledge. In Some Congress, volume 15 of Magma, Veldhoven, The Netherlands, pages 373, 2002.


  66. [STEF-02] D. Stefan, M. Janssen, A. Naressi, C. Couturier, S. Cavassila, H. Ratiney, D. van Ormondt, and D. Graveron-Demilly. The MRSI functionalities of the JMRUI software. In European Society for Magnetic Resonance in Medicine and Biology, 19th Annual Meeting, Magma, Cannes, France, pages 370, 22-25 August 2002.


  67. [CAVA-00] S. Cavassila, O. Beuf, A. Naressi, and D. Graveron-Demilly. Automatic analysis of double phase encoded imaging data. In International Society of Magnetic Resonance in Medicine, 8th Scientific Meeting and Exhibition, Denver, USA, pages 1947, 2000.


  68. [VANH-00] P. Van Hecke, L. Vanhamme, S. Cavassila, D. Graveron-Demilly, S. Van Huffel, and D. Michel. Time-domain processing of biomedical NMR spectroscopy signals: the MRUI approach. In 15th European Experimental NMR Conference, Leipzig, Germany, pages 17, 2000.


  69. [CAVA-99b] S. Cavassila, O. Beuf, and D. Graveron-Demilly. Automatic analysis of double phase encoded imaging data. In European Society of Magnetic Resonance in Medicine and Biology, 16th Annual Meeting, Seville, Spain, pages 236, 1999.


  70. [CAVA-98] S. Cavassila, S. Deval, C. Huegen, D. van Ormondt, and D. Graveron-Demilly. Beneficial Influence of prior knowledge on the Quantitation of multiplets. In International Society of Magnetic Resonance in Medicine, 6th Scientific Meeting and Exhibition, Sydney, Australia, pages 1843, 1998.


  71. [CAVA-97a] S. Cavassila, O. Beuf, A. Briguet, and D. Graveron-Demilly. Noise reduction of MR k-space using the Cadzow estimator. In World Congress on Medical and Biomedical Engineering, Nice, France, pages 561, 1997.


  72. [CAVA-97b] S. Cavassila, O. Beuf, and D. Graveron-Demilly. Enhancement of MRI k-space using Cadzow estimator. In International Society of Magnetic Resonance in Medicine, 5th Scientific Meeting and Exhibition, Vancouver, Canada, pages 2044, 1997.


  73. [GRAVE-96a] D. Graveron-Demilly, G.J. Marseille, Y. Crémillieux, S. Cavassila, and D. van Ormondt. A Fourier Imaging method based on Sparse Radial Scanning and Bayesian Estimation: ST-FT. In International Society of Magnetic Resonance in Medicine, 4th Annual Meeting, New York, USA, pages 1863, 1996.


  74. [GRAV-96] D. Graveron-Demilly, G.J. Marseille, Y. Crémillieux, S. Cavassila, and D. van Ormondt. MRI of material with short relaxation times using Cartesian Radial scanning. In Conf Proc IEEE Eng Med Biol Soc, volume 5, Amsterdam, The Netherlands, pages 2127-2129, 1996.


  75. [vdboog-96] A. van den Boogaart, S. Cavassila, L. Vanhamme, J. Totz, and P. Van Hecke. A complete software package for MR signal processing. In Conf Proc IEEE Eng Med Biol Soc, volume 5, Amsterdam, The Netherlands, pages 2130-2132, 1996.


  76. [CAVA-95] S. Cavassila, B. Fenet, and D. Graveron-Demilly. Improvement of the spectral resolution of the linear prediction methods. In International Society of Magnetic Resonance in Medicine, 3rd Scientific Meeting and Exhibition, Nice, France, pages 1951, 1995.


  77. [GRAVE-95] D. Graveron-Demilly, Y. Crémillieux, S. Cavassila, and C. Mauger. RS-FT: a 3D Fourier Imaging Method based on a Sparse Radial Scan. In International Society of Magnetic Resonance in Medicine, 3rd Scientific Meeting and Exhibition, Nice, France, pages 671, 1995.


  78. [CAVA-94] S. Cavassila, A. Briguet, D. Graveron-Demilly, C. Decannière, P. Van Hecke, S. Van Huffel, and D. van Ormondt. Quantification of non descript peaks with SVD-based methods and estimation of errors. In International Society of Magnetic Resonance, San Francisco, USA, pages 1187, 1994.


  79. [CAVA-94a] S. Cavassila, A. Diop, A. Briguet, and D. Graveron-Demilly. Improvements of images of metabolites by linear prediction method. In European Society of Magnetic Resonance in Medicine and Biology, 11th Annual Meeting, Vienna, Austria, pages 561, 1994.


Invited Conferences
  1. [CAVA-09c] S. Cavassila. Etude du métabolisme cérébral du petit animal par Spectrométrie de Résonance Magnétique in vivo. In Journée de l'Institut Fédératif des Neurosciences de Lyon: Imagerie cérébrale du petit animal, Lyon, France, May 2009.


  2. [CAVA-09b] S. Cavassila, H. Ratiney, and H. Saint-Jalmes. Spectroscopie du foie par résonance magnétique Nucléaire. In Journée de Printemps de la société d'imagerie abdominale et digestive, Paris, France, May 2009.


Miscellaneous
  1. [RAMA-10b] N. Ramamonjisoa, H. Ratiney, F. Rajas, E. Mutel, F. Pilleul, O. Beuf, and S. Cavassila. Spectroscopie de resonance magnetique in vivo d'un modele murin de glycogenose 1a a 7 T dans le foie. Journées thématiques du GDR Imageries in Vivo, september 2010.


  2. [RAMA-10c] N. Ramamonjisoa, H. Ratiney, F. Rajas, F. Pilleul, O. Beuf, and S. Cavassila. Spectroscopie de resonance magnetique in vivo d'un modele murin de glycogenose 1a a 7 T. 15ème journée scientifique de l'Ecole Doctorale Interdisciplinaire Science Santé, mars 2010.


  3. [ROUS-10b] T. Roussel, S. Cavassila, and H. Ratiney. Stratégies de quantification en spectroscopie 2D J-résolue in vivo. Journées thématiques du GDR Imageries in Vivo, september 2010.


  4. [RAMA-09] N. Ramamonjisoa, F. Rajas, S. Cavassila, H. Ratiney, F. Pilleul, and O. Beuf. Quantification de la stéatose hépatique par spectroscopie de résonance magnétique dans un modèle de souris obèse et diabétique. 14ème journée scientifique de l'Ecole Doctorale Interdisciplinaire Science Santé, mars 2009.


  5. [BUCU-08b] A. Bucur, A. Bernard, C. Cudalbu, P. Giraudon, D. Graveron-Demilly, H. Ratiney, and S. Cavassila. Quantitative analysis of metabolic Alterations in a mouse model of Neuro-inflammation using In vivo MR Spectroscopy. Rencontres Scientifiques de l'Institut Fédératif des Neurosciences de Lyon, October 2008.


  6. [RATI-08e] H. Ratiney, A. Bucur, C. Cudalbu, and S. Cavassila. Estimation d'une mixture de gaussiennes par l'algorithme d'Espérance-Maximisation pour la modélisation des signaux de macromolécules acquis par inversion-récupération. Journée scientifique d'inauguration du Centre Europèen de RMN à Très Hauts Champs: Frontières de la RMN : du développement durable à la biologie des systèmes, July 2008.


  7. [RATI-08g] H. Ratiney, A. Bucur, C. Cudalbu, and S. Cavassila. Estimation d'une mixture de gaussiennes par l'algorithme d'Espérance-Maximisation pour la modélisation des signaux de macromolécules acquis par inversion-récupération. Rencontres Scientifiques de l'Institut Fédératif des Neurosciences de Lyon, October 2008.


  8. [RATI-08f] H. Ratiney, S. Cavassila, M. Albers, J. Kurhanewicz, G. Da Costa, V. Metzinger, P. Eliat, and H. Saint Jalmes. Automatic Quantification Methods for HR-MAS data. Journée scientifique d'inauguration du Centre Europèen de RMN à Très Hauts Champs: Frontières de la RMN : du développement durable à la biologie des systèmes, July 2008.


  9. [BUCU-07] A. Bucur, A. Bernard, C. Cudalbu, P. Giraudon, D. Graveron-Demilly, H. Ratiney, and S. Cavassila. Analyse quantitative des altérations du métabolisme dans un modèle animal de neuro-inflammation viro-induit par spectrométrie de résonance magnétique. Rencontres Scientifiques de l'Institut Fédératif des Neurosciences de Lyon, December 2007.


  10. [BUCU-07b] A. Bucur, A. Bernard, C. Cudalbu, P. Giraudon, D. Graveron-Demilly, H. Ratiney, and S. Cavassila. Analyse quantitative des altérations du métabolisme dans un modèle animal de neuro-inflammation viro-induit par spectrométrie de résonance magnétique. Réunion scientifique de l'Institut Fédératif de Recherche-62 Lyon Est, Faculté de médecine Laennec, December 2007.


  11. [BUCU-06] A. Bucur, A. Bernard, C. Cudalbu, P. Giraudon, and S. Cavassila. Etude des métabolites cérébraux dans le modèle de neuroinflammation viro-induite par spectrométrie de résonance magnétique. Atelier du savoir Imagerie médicale CNRS, Lyon, 2006.


  12. [CUDA-06e] C. Cudalbu, S. Cavassila, A. Montavont, P. Ryvlin, O. Beuf, A. Briguet, and D. Graveron-Demilly. Time evolution of brain metabolism, from the acute phase up to the chronic phase, in the pilocarpine model of temporal lobe epilepsy. Rencontres scientifiques de l'Institut Fédératif des Neurosciences de Lyon, 26 septembre, 2006.


  13. [CAVA-04f] S. Cavassila and H. Ratiney. Théorie de Cramér Rao dans le domaine de la RMN : utilité et mise en oeuvre. INSERM U594, Grenoble, Janvier, 2004.


  14. [CUDA-04f] C. Cudalbu, S. Cavassila, D. Grenier, H. Ratiney, A. Briguet, and D. Graveron-Demilly. Caractérisation du Métabolisme Cérébral par Spectroscopie RMN du Proton à 7 Teslas. Journée de l'EDISS- 7 avril 2004, 2004.


  15. [MITR-01a] F. Mitri, S. Cavassila, D. van Ormondt, and D. Graveron-Demilly. Automated spectral analysis : formation of a priori information by quantum mechanics and application to in vivo spectroscopy. 4th meeting TMR FMRX-CT97-0160, Thessaloniki, GR, 8-10 March, 2001.


  16. [CAVA-99d] S. Cavassila, L. Vanhamme, D. van Ormondt, and D. Graveron-Demilly. Méthodes de quantification des signaux de spectroscopie RMN. IXe journée grenobloise de RMN, Grenoble, 1999.


  17. [CAVA-97d] S. Cavassila, A. van den Boogaart, J. Totz, D. van Ormondt, and D. Graveron-Demilly. MRUI-A MATLAB Interface for user friendly processing of magnetic resonance spectroscopy (MRS) datasets using advanced signal processing algorithms. 6ème journée grenobloise de RMN, Grenoble, 1997.



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