The full list of my publication can be found on HAL
or on Google
Scholar.
Journal papers
In this list, the students I supervised are underlined.
- B. Pialot, F. Guidi, G. Bonciani, F. Varray, P. Tortoli, A. Ram
Computationally Efficient SVD Filtering for Ultrasound Flow Imaging and Real-Time Application to Ultrafast Doppler.
IEEE Transactions on Biomedical Engineering, accepted, 2024. 
- J. Puig, D. Friboulet, H. J. Ling, F. Varray, J. Porée, J. Provost, D. Garcia, and F. Millioz
Boosting cardiac color doppler frame rates with deep learning.
IEEE Transactions on Ultrasonics, Ferroelectricity and Frequency Control, accepted, 2024.
- S. Wang, Y. Wang, Z. Li, Y. Zhao, Y. Zhang, and F. Varray
Investigating the three-dimensional myocardial micro-architecture in the laminar structure using x-ray phase-contrast microtomography.
Scientific Reports, 14(14329), 2024.
- C. Lachambre, A. Basarab, J.C. Béra, B. Nicolas, F. Varray, and B. Gilles
An inverse method using cross spectral matrix fitting for passive cavitation imaging.
IEEE Transactions on Ultrasonics, Ferroelectricity and Frequency Control, 71(8):995-1005, 2024.
- D. Garcia and F. Varray
SIMUS3: an open-source simulator for 3-D ultrasound imaging.
Computer Methods and Programs in Biomedicine, pp. 108169, 2024.
- D. Garcia, M. Tamraoui, and F. Varray
Think twice before f-numbering.
Ultrasonics, 138, pp. 107222, 2024.
- A. Sivadon, F. Varray, J.C. Béra, B. Nicolas, and B. Gilles
3D passive cavitation imaging using adaptive beamforming and matrix array transducer with random apodization.
IEEE Transactions on Ultrasonics, Ferroelectricity and Frequency Control, 71(2):238-254, 2024.
- J. Lu, F. Millioz, F. Varray, J. Porée, J. Provost, O. Bernard, D. Garcia, and D. Friboulet
Ultrafast cardiac imaging using deep learning for speckle-tracking echocardiography.
IEEE Transactions on Ultrasonics, Ferroelectricity and Frequency Control, 70(12):1761-1772, 2023.
- S. Salles, F. Varray, D. Garcia, H. Liebgott, and B. Nicolas
3-D high frame rate imaging with motion compensation (3-D HFR with MoCo): an experimental evaluation.
IEEE Open Journal of Ultrasonics, Ferroelectrics, and Frequency Control, 3:137-145, 2023.
- S. Wang, Z. Li, F. Yuan, and F. Varray
Use of the intrusion angle to describe the radial orientation of local cardiomyocytes in the left ventricle.
Journal of Morphology, 284(12):e21650, 2023.
- B. Pialot, Augeul L., L. Petrusca, and F. Varray
A simplified and accelerated implementation of SVD for filtering ultrafast Doppler blood flow images.
Ultrasonics, 134, pp. 107099, 2023.
- E. Carcreff, E. Laroche, F. Varray, and B. Nicolas
Nonlinear beamforming based on amplitude coherence applied to ultrasonic imaging of coarse-grained steels.
ASME Journal Nondestructive Evaluation, 6(4):041001, 2023.
- B. Pialot, C. Lachambre, A. Lorente Mur, L. Augeul, L. Petrusca, A. Basarab, and F. Varray
Adaptive noise reduction for power doppler imaging using svd filtering in the channel domain and coherence weighting of pixels.
Physics in Medicine and Biology, 68(2):025001, 2023.
- S. Wang, J. Cui, Y. Jing, and F. Varray
Oscillation of the orientation of cardiomyocyte aggregates in human left ventricle free wall.
Journal of Anatomy, 242(3):373-386, 2022.
- A. Cigier, F. Varray, and D. Garcia
SIMUS: an open-source simulator for medical ultrasound imaging. Part II: comparison with four popular simulators.
Computer Methods and Programs in Biomedicine, 220:106774, 2022.
- B. Pialot, A. Bernard, H. Liebgott, and F. Varray
Sensitivity enhancement using chirp transmission for an ultrasound arthroscopic probe.
IEEE Transactions on Ultrasonics, Ferroelectricity, 69(10):2776-2784, 2022.
- J. Grohl, L. Hacker, B. T. Cox, K. K. Dreher, S. Morscher, A. Rakotondrainibe, F. Varray, L. C. M. Yip, W. C. Vogt, and S. E. Bohndiek
The IPASC data format: A consensus data format for photoacoustic imaging.
Photoacoustics, volume 26, pages 100339, 2022.
- S. Wang, F. Varray, L. Wanyu, P. Clarysse, and I.E. Magnin
Measurement of local orientation of cardiomyocyte aggregates in human left ventricle free wall samples using X-ray phase-contrast microtomography.
Medical Image Analysis, 75:102269, 2022.
- X. Jiang, V. Perrot, F. Varray, S. Bart and P. Hartwell
Piezoelectric Micromachined Ultrasonic Transducer for Arterial Wall Dynamics Monitoring.
IEEE Transactions on Ultrasonics, Ferroelectricity and
Frequency Control, 69(1):291-298, 2022.
- A. Dolet, R. Ammanouil, V. Petrilli, C. Richard, P. Tortoli, D. Vray and F. Varray
In Vitro and In Vivo Multispectral Photoacoustic Imaging for the Evaluation of Chromophore Concentration.
Sensors, 21(10), 2021.
- R. Cohen, N. Fingerhut, F. Varray, H. Liebgott, and Y. Eldar.
Sparse convolutional beamforming for 3D ultrafast ultrasound imaging.
IEEE Transactions on Ultrasonics, Ferroelectricity and
Frequency Control, 68(7):2444-2459, 2021.
- M. Polichetti, F.
Varray, B. Gilles, J.-C. Béra, and B. Nicolas.
Use of the cross-spectral density matrix for enhanced passive
ultrasound imaging of cavitation.
IEEE Transactions on Ultrasonics, Ferroelectricity and
Frequency Control, 68(4):910-925, 2021.
- V. Perrot, M. Polichetti,
F. Varray, and D. Garcia.
So you think you can DAS? A viewpoint on delay-and-sum beamforming.
Ultrasonics, 111, pp. 106309, 2021.
- M. Azizian Kalkhoran, F.
Varray, A.S. Savoia, and D. Vray.
Sparse hand-held probe for optoacoustic ultrasound volumetric
imaging: an experimental proof of concept study.
Optics Letters, 45(4):885-888, 2020.
- M. Ciancone, N. Bellec, S.
Cammas-Marion, A. Dolet, D. Vray, F. Varray, C. Le
Goff-Gaillard, X. Le Goff, Y. Arlot-Bonnemains, and F. Camerel.
Liposomes containing nickel-bis(dithiolene) complexes for
photothermal theranostics.
Langmuir, 35(47):15121-15130, 2019.
- P. Boulos, F. Varray,
A. Poizat, A. Ramalli, B. Gilles, J.C. Bera, and C. Cachard.
Weighting the passive acoustic mapping technique with the
phase coherence factor for passive ultrasound imaging of
ultrasound-induced cavitation.
IEEE Trans Ultrason Ferroelectr Freq Frequency Control,
65(12):2301-2310, 2018.
- E. Roux, F. Varray,
L. Petrusca, C. Cachard, P. Tortoli, and H. Liebgott.
Experimental 3-D ultrasound imaging with 2-D sparse arrays
using focused and diverging waves.
Nature Scientific Report, 8(9108), 2018.
- A. Dolet, F. Varray,
Simon Mure, Thomas Grenier, Yubin Liu, Yuan Zhen, Piero Tortoli,
and Didier Vray.
Spatial and spectral regularization to discriminate
tissues using multispectral photoacoustic imaging.
EURASIP Journal on Advances in Signal Processing,
(39), 2018.
- Y. Benane, Denis Burjoreanu,
Roberto Lavarello, F. Varray, Jean-Michel Escoffre,
Anthony Novell, Christian Cachard, and Olivier Basset.
Experimental implementation of a pulse compression
technique using coherent plane wave compounding.
IEEE Trans Ultrason Ferroelectr Freq Frequency
Control, 65(5):1025-1036, 2018.
- M. Polichetti, F. Varray,
Jean-Christophe Béra, Christian Cachard, and Barbara Nicolas.
A nonlinear beamformer based on p-th root compression -
application to planewave ultrasound imaging.
Applied Sciences, 8(4), 2018.
- L. Petrusca, F. Varray, R.
Souchon, A. Bernard, J.-Y. Chapelon, H. Liebgott, A. N'Djin, and
M. Viallon.
Fast volumetric ultrasound b-mode and doppler imaging with
a new high-channels density platform for advanced 4D cardiac
imaging/therapy. Applied Sciences, 8(2), 2018.
- M. Vallet, F. Varray,
J. Boutet, J.M. Dinten, G. Caliano, A. Savoia, and D. Vray.
Quantitative comparison of pzt and cmut probes for
photoacoustic imaging: experimental validation.
Photoacoustics, 8:48-58, 2017.
- F. Varray, I. Mirea, M.
Langer, F. Peyrin, L. Fanton, and I.E. Magnin.
Extraction of the 3-D local orientation of myocytes in
human cardiac tissue using x-ray phase-contrast microtomography
and multi-scale analysis.
Medical Image Analysis, 38:117-132, 2017.
- F. Varray, M. Toulemonde, A.
Bernard, O. Basset, and C. Cachard.
Fast nonlinear ultrasound propagation simulation using a
slowly varying envelope approximation.
IEEE Trans Ultrason Ferroelectr Freq Control,
64(6):1015-1022, 2017.
- A. Dolet, F. Varray,
E. Roméo, T. Dehoux, and D. Vray.
Spectrophotometry and photoacoustic imaging: a comparative
study.
IRBM, 38(6):352-356, 2017.
- E. Turquin, L. Petrusca, O.
Bernard, M. Viallon, H. Liebgott, and F. Varray.
Local orientation imaging for tissue structure using
ultrasound imaging.
IRBM, 38(5):298-303, 2017.
- M. Zhang, F. Varray, A.
Besson, R.E. Carrillo, M. Viallon, D. Garcia, J.P. Thiran, D.
Friboulet, H. Liebgott, and O. Bernard.
Extension of fourier-based techniques for ultrafast
imaging in ultrasound with diverging waves.
IEEE Trans Ultrason Ferroelectr Freq Control,
63(12):2125-2137, 2016.
- A. Besson, M. Zhang, F. Varray,
H. Liebgott, D. Friboulet, Y. Wiaux, J.P. Thiran, R.E. Carillo,
and O. Bernard.
A sparse reconstruction framework for fourier-based plane
wave imaging.
IEEE Trans Ultrason Ferroelectr Freq Control,
63(12):2092-2106, 2016.
- F. Varray, O. Bernard, S.
Assou, C. Cachard, and D. Vray.
Hybrid strategy to simulate 3-D nonlinear radio-frequency
ultrasound using a variant spatial PSF.
IEEE Trans Ultrason Ferroelectr Freq Control,
63(9):1390-1398, 2016.
- F. Lin, C. Cachard, F. Varray,
and O. Basset.
Generalization of multi-pulse transmission techniques for
ultrasound imaging.
Ultrasonic Imaging, 37(4):294-311, 2015.
- F. Lin, C. Cachard, R. Mori, F.
Varray, F. Guidi, and O. Basset.
Ultrasound contrast imaging: Influence of scatterer motion
in multi-pulse techniques.
IEEE Trans Ultrason Ferroelectr Freq Control,
60(10):2065-2078, 2013.
- F. Varray, O. Basset, P.
Tortoli, and C. Cachard.
Creanuis: A nonlinear radio frequency ultrasound image
simulator.
Ultrasound in Medicine and Biology,
39(10):1915-1924, 2013.
- F. Varray and H. Liebgott.
Multi-resolution transverse oscillation in ultrasound
imaging for motion estimation.
IEEE Trans Ultrason Ferroelectr Freq Control,
60(7):1333-1342, 2013.
- F. Varray, A. Ramalli, C.
Cachard, P. Tortoli, and O. Basset.
Fundamental and second-harmonic ultrasound field
computation of inhomogeneous nonlinear medium with a generalized
angular spectrum method.
IEEE Trans Ultrason Ferroelectr Freq Control,
58(7):1366-1376, 2011.
- F. Varray, O. Basset, P.
Tortoli, and C. Cachard.
Extensions of nonlinear B/A parameter imaging methods for
echo mode.
IEEE Trans Ultrason Ferroelectr Freq Control,
58(6):1232-1244, 2011.
- F. Varray, C. Cachard, A.
Ramalli, P. Tortoli, and O. Basset.
Simulation of ultrasound nonlinear propagation on gpu
using a generalized angular spectrum method.
EURASIP Journal on Image and Video Processing,
17(1), 2011.
