bbvtk Namespace Reference

Classes
class	ImagePlanes
class	IsoSurfaceExtractor
class	MarchingCubes
class	MIPCreator
class	SegmentationConnectivity
Typedefs
typedef vtkImagePlaneWidget *	I
typedef vtkInteractorObserver *	O
typedef std::vector< double >	winLevel
typedef std::vector< double >	vectorcolour
Functions
	BBTK_ADD_TEMPLATE_BLACK_BOX_TO_PACKAGE (vtk, ToString, vtkImageDataPtr)
	BBTK_ADD_TEMPLATE2_BLACK_BOX_TO_PACKAGE (vtk, Cast, I, O)
	BBTK_BLACK_BOX_IMPLEMENTATION (ImagePlanes, bbtk::AtomicBlackBox)
	BBTK_BEGIN_DESCRIBE_BLACK_BOX (ImagePlanes, bbtk::AtomicBlackBox)
	BBTK_NAME ("ImagePlanes")
	BBTK_AUTHOR ("laurent.guigues@creatis.insa-lyon.fr")
	BBTK_DESCRIPTION ("Creates three 3D planes with the input image mapped onto with which the user can interact. The output vtkImagePlaneWidget objects are to be inserted into a 3D scene (e.g. a Viewer3D)")
	BBTK_CATEGORY ("3D object creator")
	BBTK_INPUT (ImagePlanes, In,"Input Image", vtkImageData *,"")
	BBTK_INPUT (ImagePlanes, WindowLevel,"Widdow Level", winLevel,"")
	BBTK_OUTPUT (ImagePlanes, PlaneX,"The image plane in X direction", vtkImagePlaneWidget *,"")
	BBTK_OUTPUT (ImagePlanes, PlaneY,"The image plane in Y direction", vtkImagePlaneWidget *,"")
	BBTK_OUTPUT (ImagePlanes, PlaneZ,"The image plane in Z direction", vtkImagePlaneWidget *,"")
	BBTK_END_DESCRIBE_BLACK_BOX (ImagePlanes)
	BBTK_BLACK_BOX_IMPLEMENTATION (IsoSurfaceExtractor, bbtk::AtomicBlackBox)
	BBTK_BEGIN_DESCRIBE_BLACK_BOX (IsoSurfaceExtractor, bbtk::AtomicBlackBox)
	BBTK_NAME ("IsoSurfaceExtractor")
	BBTK_AUTHOR ("eduardo.davila / laurent.guigues at creatis.insa-lyon.fr")
	BBTK_DESCRIPTION ("Extracts an iso-surface of a 3D image and creates a vtkProp3D object to insert into a 3D scene (e.g. a Viewer3D)")
	BBTK_INPUT (IsoSurfaceExtractor, In,"Input image", vtkImageData *,"")
	BBTK_INPUT (IsoSurfaceExtractor, Isovalue,"Isovalue", double,"")
	BBTK_INPUT (IsoSurfaceExtractor, Opacity,"Opacity", double,"")
	BBTK_INPUT (IsoSurfaceExtractor, Colour,"r g b", vectorcolour,"colour")
	BBTK_INPUT (IsoSurfaceExtractor, Renderer,"3D scene in which to insert the surface", vtkRenderer *,"")
	BBTK_OUTPUT (IsoSurfaceExtractor, Out,"Extracted iso-surface", vtkProp3D *,"")
	BBTK_END_DESCRIBE_BLACK_BOX (IsoSurfaceExtractor)
	BBTK_BLACK_BOX_IMPLEMENTATION (MarchingCubes, bbtk::AtomicBlackBox)
	BBTK_BEGIN_DESCRIBE_BLACK_BOX (MarchingCubes, bbtk::AtomicBlackBox)
	BBTK_NAME ("MarchingCubes")
	BBTK_DESCRIPTION ("Extracts an iso-surface of an image using the marching cubes algorithm (bbfication of vtkMarchingCubes)")
	BBTK_CATEGORY ("image;mesh")
	BBTK_INPUT (MarchingCubes, In,"Image", vtkImageData *,"")
	BBTK_INPUT (MarchingCubes, Value,"Value of the iso-surface", double,"")
	BBTK_OUTPUT (MarchingCubes, Out,"Output iso-surface", vtkPolyData *,"")
	BBTK_END_DESCRIBE_BLACK_BOX (MarchingCubes)
	BBTK_BLACK_BOX_IMPLEMENTATION (MIPCreator, bbtk::AtomicBlackBox)
	BBTK_BEGIN_DESCRIBE_BLACK_BOX (MIPCreator, bbtk::AtomicBlackBox)
	BBTK_NAME ("MIPCreator")
	BBTK_DESCRIPTION ("Creates a Maximum Intensity Projection (MIP) view of a 3D image. Creates a vtkProp3D object to insert into a 3D scene (e.g. a Viewer3D)")
	BBTK_INPUT (MIPCreator, Shift,"Gray scale shift", int,"")
	BBTK_INPUT (MIPCreator, Scale,"Gray scale scaling", float,"")
	BBTK_INPUT (MIPCreator, In,"Input Image", vtkImageData *,"")
	BBTK_OUTPUT (MIPCreator, Out,"MIP object to plug into a 3D viewer", vtkProp3D *,"")
	BBTK_END_DESCRIBE_BLACK_BOX (MIPCreator)
	BBTK_ADD_BLACK_BOX_TO_PACKAGE (vtk, SegmentationConnectivity)
	BBTK_BLACK_BOX_IMPLEMENTATION (SegmentationConnectivity, bbtk::AtomicBlackBox)
	BBTK_BEGIN_DESCRIBE_BLACK_BOX (SegmentationConnectivity, bbtk::AtomicBlackBox)
	BBTK_NAME ("SegmentationConnectivity")
	BBTK_AUTHOR ("eduardo.davila [at] creatis.insa-lyon.fr")
	BBTK_DESCRIPTION ("Segmentation with min max threshold and connectivity")
	BBTK_INPUT (SegmentationConnectivity, In,"Input image", vtkImageData *,"")
	BBTK_INPUT (SegmentationConnectivity, PositionXYZ,"vector with the Position [x y z]", std::vector< int >,"")
	BBTK_INPUT (SegmentationConnectivity, ThresholdMinMax,"vector with the Threshold [min max]", std::vector< int >,"")
	BBTK_OUTPUT (SegmentationConnectivity, Out,"Result image", vtkImageData *,"")
	BBTK_END_DESCRIBE_BLACK_BOX (SegmentationConnectivity)

---

Typedef Documentation

typedef vtkImagePlaneWidget* bbvtk::I

Definition at line 56 of file bbvtkImagePlanes.cxx.

typedef vtkInteractorObserver* bbvtk::O

Definition at line 57 of file bbvtkImagePlanes.cxx.

typedef std::vector<double> bbvtk::vectorcolour

Definition at line 101 of file bbvtkIsoSurfaceExtractor.h.

typedef std::vector<double> bbvtk::winLevel

Definition at line 71 of file bbvtkImagePlanes.h.

---

Function Documentation

bbvtk::BBTK_ADD_BLACK_BOX_TO_PACKAGE	(	vtk	,
		SegmentationConnectivity
	)

bbvtk::BBTK_ADD_TEMPLATE2_BLACK_BOX_TO_PACKAGE	(	vtk	,
		Cast	,
		I	,
		O
	)

bbvtk::BBTK_ADD_TEMPLATE_BLACK_BOX_TO_PACKAGE	(	vtk	,
		ToString	,
		vtkImageDataPtr
	)

bbvtk::BBTK_AUTHOR

(

"eduardo.davila creatis.insa-lyon.fr"

[at]

)

bbvtk::BBTK_AUTHOR

(

"eduardo.davila / laurent.guigues at creatis.insa-lyon.fr"

)

bbvtk::BBTK_AUTHOR

(

"laurent.guigues@creatis.insa-lyon.fr"

)

bbvtk::BBTK_BEGIN_DESCRIBE_BLACK_BOX	(	SegmentationConnectivity	,
		bbtk::AtomicBlackBox
	)

bbvtk::BBTK_BEGIN_DESCRIBE_BLACK_BOX	(	MIPCreator	,
		bbtk::AtomicBlackBox
	)

bbvtk::BBTK_BEGIN_DESCRIBE_BLACK_BOX	(	MarchingCubes	,
		bbtk::AtomicBlackBox
	)

bbvtk::BBTK_BEGIN_DESCRIBE_BLACK_BOX	(	IsoSurfaceExtractor	,
		bbtk::AtomicBlackBox
	)

bbvtk::BBTK_BEGIN_DESCRIBE_BLACK_BOX	(	ImagePlanes	,
		bbtk::AtomicBlackBox
	)

bbvtk::BBTK_BLACK_BOX_IMPLEMENTATION	(	SegmentationConnectivity	,
		bbtk::AtomicBlackBox
	)

bbvtk::BBTK_BLACK_BOX_IMPLEMENTATION	(	MIPCreator	,
		bbtk::AtomicBlackBox
	)

bbvtk::BBTK_BLACK_BOX_IMPLEMENTATION	(	MarchingCubes	,
		bbtk::AtomicBlackBox
	)

bbvtk::BBTK_BLACK_BOX_IMPLEMENTATION	(	IsoSurfaceExtractor	,
		bbtk::AtomicBlackBox
	)

bbvtk::BBTK_BLACK_BOX_IMPLEMENTATION	(	ImagePlanes	,
		bbtk::AtomicBlackBox
	)

bbvtk::BBTK_CATEGORY

(

"image;mesh"

)

bbvtk::BBTK_CATEGORY

(

"3D object creator"

)

bbvtk::BBTK_DESCRIPTION

(

"Segmentation with min max threshold and connectivity"

)

bbvtk::BBTK_DESCRIPTION

(

"Creates a Maximum Intensity Projection (MIP) view of a 3D image. Creates a vtkProp3D object to insert into a 3D scene (e.g. a Viewer3D)"

)

bbvtk::BBTK_DESCRIPTION

(

"Extracts an iso-surface of an image using the marching cubes algorithm (bbfication of vtkMarchingCubes)"

)

bbvtk::BBTK_DESCRIPTION

(

"Extracts an iso-surface of a 3D image and creates a vtkProp3D object to insert into a 3D scene (e.g. a Viewer3D)"

)

bbvtk::BBTK_DESCRIPTION

(

"Creates three 3D planes with the input image mapped onto with which the user can interact. The output vtkImagePlaneWidget objects are to be inserted into a 3D scene (e.g. a Viewer3D)"

)

bbvtk::BBTK_END_DESCRIBE_BLACK_BOX

(

SegmentationConnectivity

)

bbvtk::BBTK_END_DESCRIBE_BLACK_BOX

(

MIPCreator

)

bbvtk::BBTK_END_DESCRIBE_BLACK_BOX

(

MarchingCubes

)

bbvtk::BBTK_END_DESCRIBE_BLACK_BOX

(

IsoSurfaceExtractor

)

bbvtk::BBTK_END_DESCRIBE_BLACK_BOX

(

ImagePlanes

)

bbvtk::BBTK_INPUT	(	SegmentationConnectivity	,
		ThresholdMinMax	,
		"vector with the Threshold "	[min max],
		std::vector< int >	,
		""
	)

bbvtk::BBTK_INPUT	(	SegmentationConnectivity	,
		PositionXYZ	,
		"vector with the Position "	[x y z],
		std::vector< int >	,
		""
	)

bbvtk::BBTK_INPUT	(	SegmentationConnectivity	,
		In	,
		"Input image"	,
		vtkImageData *	,
		""
	)

bbvtk::BBTK_INPUT	(	MIPCreator	,
		In	,
		"Input Image"	,
		vtkImageData *	,
		""
	)

bbvtk::BBTK_INPUT	(	MIPCreator	,
		Scale	,
		"Gray scale scaling"	,
		float	,
		""
	)

bbvtk::BBTK_INPUT	(	MIPCreator	,
		Shift	,
		"Gray scale shift"	,
		int	,
		""
	)

bbvtk::BBTK_INPUT	(	MarchingCubes	,
		Value	,
		"Value of the iso-surface"	,
		double	,
		""
	)

bbvtk::BBTK_INPUT	(	MarchingCubes	,
		In	,
		"Image"	,
		vtkImageData *	,
		""
	)

bbvtk::BBTK_INPUT	(	IsoSurfaceExtractor	,
		Renderer	,
		"3D scene in which to insert the surface"	,
		vtkRenderer *	,
		""
	)

bbvtk::BBTK_INPUT	(	IsoSurfaceExtractor	,
		Colour	,
		"r g b"	,
		vectorcolour	,
		"colour"
	)

bbvtk::BBTK_INPUT	(	IsoSurfaceExtractor	,
		Opacity	,
		"Opacity"	,
		double	,
		""
	)

bbvtk::BBTK_INPUT	(	IsoSurfaceExtractor	,
		Isovalue	,
		"Isovalue"	,
		double	,
		""
	)

bbvtk::BBTK_INPUT	(	IsoSurfaceExtractor	,
		In	,
		"Input image"	,
		vtkImageData *	,
		""
	)

bbvtk::BBTK_INPUT	(	ImagePlanes	,
		WindowLevel	,
		"Widdow Level"	,
		winLevel	,
		""
	)

bbvtk::BBTK_INPUT	(	ImagePlanes	,
		In	,
		"Input Image"	,
		vtkImageData *	,
		""
	)

bbvtk::BBTK_NAME

(

"SegmentationConnectivity"

)

bbvtk::BBTK_NAME

(

"MIPCreator"

)

bbvtk::BBTK_NAME

(

"MarchingCubes"

)

bbvtk::BBTK_NAME

(

"IsoSurfaceExtractor"

)

bbvtk::BBTK_NAME

(

"ImagePlanes"

)

bbvtk::BBTK_OUTPUT	(	SegmentationConnectivity	,
		Out	,
		"Result image"	,
		vtkImageData *	,
		""
	)

bbvtk::BBTK_OUTPUT	(	MIPCreator	,
		Out	,
		"MIP object to plug into a 3D viewer"	,
		vtkProp3D *	,
		""
	)

bbvtk::BBTK_OUTPUT	(	MarchingCubes	,
		Out	,
		"Output iso-surface"	,
		vtkPolyData *	,
		""
	)

bbvtk::BBTK_OUTPUT	(	IsoSurfaceExtractor	,
		Out	,
		"Extracted iso-surface"	,
		vtkProp3D *	,
		""
	)

bbvtk::BBTK_OUTPUT	(	ImagePlanes	,
		PlaneZ	,
		"The image plane in Z direction"	,
		vtkImagePlaneWidget *	,
		""
	)

bbvtk::BBTK_OUTPUT	(	ImagePlanes	,
		PlaneY	,
		"The image plane in Y direction"	,
		vtkImagePlaneWidget *	,
		""
	)

bbvtk::BBTK_OUTPUT	(	ImagePlanes	,
		PlaneX	,
		"The image plane in X direction"	,
		vtkImagePlaneWidget *	,
		""
	)