1. [TAYL-07] Ian Taylor, Ewa Deelman, Dennis Gannon, and Matthew Shields. Workflows for e-Science. Springer-Verlag, 2007.

1. [GLAT-07] Tristan Glatard, Gergely Sipos, Johan Montagnat, Zoltan Farkas, and Peter Kacsuk. Workflow Level Parametric Study Support by MOTEUR and the P-GRADE Portal. In Workflows for e-Science, chapter 18, pages 279-299. I.J. Taylor, E. Deelman, D. Gannon, and M. Shields, editors. Springer, 2007.

1. [GLAT-2007c] Tristan Glatard. Description, deployment and optimization of medical image analysis workflows on production grids. Doctorat, Université de Nice Sophia-Antipolis, Sophia-Antipolis, November 2007.

1. [GLAT-08j] T. Glatard, J. Montagnat, D. Emsellem, and D. Lingrand. A Service-Oriented Architecture enabling dynamic services grouping for optimizing distributed workflows execution. Future Gener Comp Sy, 24(7):720-730, July 2008.



2. [GLAT-08i] T. Glatard, J. Montagnat, D. Lingrand, and X. Pennec. Flexible and efficient workflow deployement of data-intensive applications on grids with MOTEUR. Journal of High Performance Computing Applications, 22(3):347-360, 2008.



3. [LIN-08b] Diane Lingrand, Johan Montagnat, and Tristan Glatard. Estimation of the latency of a production grid over several weeks. Philippine Information Technology Journal, 2, December 2008.



4. [MONT-08a] J. Montagnat, T. Glatard, I. Campos, F. Castejon, X. Pennec, T. Giuliano, V. Voznesensky, and C. Vuerli. Workflow-based data parallel applications on the EGEE production grid infrastructure. Journal of Grid Computing, 6(4):369-383, December 2008.



5. [MONT-07] J. Montagnat, T. Glatard, and D. Lingrand. Texture-based Medical Image Indexing and Retrieval on Grids. Medical Imaging Technology, 25(5), November 2007.



6. [TARR-07] A. Tarroun, M. Bonnefoy, J. Bouffard-Vercelli, C. Gedeon, B. Vallée, and F. Cotton. Could linear MRI measurements of hippocampus differentiate normal brain aging in elderly persons from Alzheimer disease?. Surg Radiol Anat, 29(1):77-81, 2007.



7. [BILL-06a] B. Kibler, C. Billet, P.A. Lacourt, R. Ferrière, and J.M. Dudley. All-fiber source of 20-fs pulses at 1550 nm using two stage linear-nonlinear compression of parabolic similaritons. IEEE Photonics Technology Letter, 18(17):1831-1833, 2006.



8. [BILL-06b] B. Kibler, C. Billet, P.A. Lacourt, R. Ferrière, L. Larger, and J.M. Dudley. Parabolic pulse generation in comb-like profiled dispersion decreasing fibre. Electronics Lett, 42(17):965-966, 2006.



9. [MAHD-06a] R. Mahdjoub, P. Chouvenc, M.J. Seurin, J. Andrieu, and A. Briguet. Sucrose solution freezing studied by magnetic resonance imaging. Carbohydr Res, 341(4):492-498, 2006.



10. [BILL-05a] C. Billet, J.M. Dudley, N. Joly, and J.C. Knight. Intermediate asymptotic evolution and photonic bandgap fiber compression of optical similaritons around 1550 nm. Optics Express, 13(9):3236-3241, 2005.



11. [JAIL-05a] F. Jaillon and H. Saint-Jalmes. Scattering coefficient determination in turbid media with backscattered polarized light. J Biomed Opt, 10(3):034016, 2005.



12. [MANS-05] J. Mansourati, M. Gilard, C. Cornily, G. Rioufol, G. Finet, Y. Pennec, J.J. Blanc, and J. Boschat. Noninvasive assessment of left main coronary stent patency with 16-slice computed tomography. Am J Cardiol, 95(1):110-112, 2005.



13. [MONT-05e] J. Montagnat and H. Delingette. 4D deformable models with temporal constraints : application to 4D cardiac image segmentation. Med Image Anal, 9(1):87-100, 2005.



14. [OHAY-05] J. Ohayon, T. Boudou, G. Finet, and P.H. Tracqui. Extended characterization of the elastic properties of thin biological samples : a revised modeling of the micropipette aspiration experiment. J Biomech, pp 648, 2005.



15. [SULA-05] A. Sulaiman, F. Tronc, A. Orsini, M. Ladjali, D. Louis, P. Adeleine, and J.P. Gamondès. Le résultat du traitement de la paroi thoracique intérieure par la sternochondroplastie de Ravitch modifiée. Résultats de 25 adultes opérés. Journal de Chirurgie Thoracique et Cardio-Vasculaire, 9(5):207-212, 2005.



16. [BILL-04b] C. Finot, G. Millot, S. Pitois, C. Billet, and J.M. Dudley. Numerical and experimental study of parabolic pulses generated via Raman amplification in standard optical fibers. Journal of Selected Topics in Quantum Electronics, 10(5):1211-1218, 2004.



17. [BILL-04a] B. Kibler, C. Billet, J.M. Dudley, R.S. Windeler, and G. Millot. Effects of structural irregularities on modulational instability phasematching in photonic crystal fibers. Opt Lett, 29(16):1903-1905, 2004.



18. [VALE-04e] S. Valette and J.M. Chassery. Approximated Centroidal Voronoi Diagrams for Uniform Polygonal Mesh Coarsening. Computer Graphics Forum (Eurographics 2004 proceedings), 23(3):381-389, 2004.



19. [WIAR-04a] M. Wiart, L. Fournier, V.Y. Novikov, D.M. Shames, T.P. Roberts, Y.J. Fu, and R.C. Brasch. Magnetic resonance imaging detects early changes in microvascular permeability in xenograft tumors after treatment with the matrix metalloprotease inhibitor prinomastat. Technol Cancer Res Treat, 3:377-382, 2004.



20. [BILL-03] C. Finot, G. Millot, C. Billet, and J.M. Dudley. Experimental generation of parabolic pulses via Raman amplification in optical fiber. Optics Express, 11(13):1547-1552, 2003.



21. [GIRA-99] P.R. Girard. Einstein's equations and Clifford Algebras. Advances in Applied Clifford Algebras, 9(2):225-230, 1999.



22. [EDAN-97] G. Edan, D. Miller, C. Confavreux, C. Lubetzki, B. Brochet, I. Berry, Y. Rolland, J.C. Froment, M. Clanet, and O. Lyon-Caen. Therapeutic effect of mitoxantrone combined with methylprednisolone in multiple sclerosis : a randomised multi-centre study of active disease using MRI and clinical criteria. J Neurol Neurosur Ps, 62:112-118, 1997.



23. [BERT-93a] Y. Berthezène, A. Mulher, P. Lang, D. Shames, O. Clement, W. Rosenay, R. Kuwatsuru, and R.C. Brasch. Safety aspects and pharmacokinetics of inhaled aerosolized Gadolinium. J Magn Reson Imaging, 3:125-130, 1993.



24. [BRAS-93] R. C. Brasch, Y. Berthezène, V. Vexler, W. Rosenau, O. Clement, A. Mulher, R. Kuwatsuru, and D. Shames. Pulmonary oxygen toxicity : demonstration of abnormal capillary permeability using contrast-enhanced MRI. Pediatr Radiol, 23:495-500, 1993.



25. [CHIR-93] P. Chirossel, S. Erpeldinger, J. Sroussi, A. Froment, and M. Amiel. Intérêt et place de l'écho-doppler dans le dépistage des hypertensions réno-vasculaires. Une étude prospective portant sur 144 artères, en référence à l'angiographie. Arch Mal Coeur, 86:1, 1993.



26. [LE_B-93a] D. Le Bihan, P. Douek, M. Argyropoulou, R. Turner, N. Patronas, and M. Fulham. Diffusion and perfusion MR imaging in brain tumors. Top Magn Reson Imaging, 5:25-31, 1993.



27. [LE_B-93b] D. Le Bihan, R. Turner, and P. Douek. Is water restricted in human brain white matter ?: An echo-planar NMR imaging study. Neurol Report, 4:887-890, 1993.



28. [MULH-93] A. Mulher, O. Clement, M. Saeed, J. Lake, D. Stites, V. Vexler, and Y. Berthezène. Gadolinium-Ethoxybenzyl (EOB)-DTPA, a new liver-specific MR contrast agent. Absence of acute hepatotoxic, cardiovascular, or immunogenic effects. Invest Radiol, 28(1):26-32, 1993.



29. [TURJ-93] F. Turjman, G. Acevedo, T. Moll, J. Duquesnel, and M. Sindou. Endovascular treatment of aneurysms with balloon Treatment of experimental carotid aneurysms by endoprosthesis implantation : preliminary report. Neurol Res, 15:181-184, 1993.



30. [AMIE-92a] M. Amiel. Systèmes de radiologie numérique en radiologie générale. Rev Im Méd, 4:651-653, 1992.



31. [CLEM-92b] O. Clement, A. Mulher, V. Vexler, Y. Berthezène, and R. C. Brasch. Gadolinium-Ethoxybenzyl-DTPA, a new liver specific MR contrast agent : kinetic and enhancement patterns in normal and cholestatic rats. Invest Radiol, 27:612-619, 1992.



32. [CLEM-92c] O. Clement, A. Mulher, V. Vexler, R. Kuwatsuru, Y. Berthezène, W. Rosenau, and R. C. Brasch. Comparison of Gd-EOB-DTPA and Gd-DTPA for contrast-enhanced MR imaging of liver tumors. J Magn Reson Imaging, 3:71-77, 1992.



33. [CROI-92d] P. Croisille, J. Ivon, and M. Amiel. Les écrans radioluminescents à mémoire. Rev Im Méd, 4(4):673-681, 1992.



34. [DOUE-92] P. Douek, R. Correa, M. Shou, R. Neville, S. Banai, V. Ferrans, S. Epstein, E. Unger, M. Leon, and R. Bonner. Dose-dependent smooth muscle cell proliferation induced by thermal injury with pulsed infrared lasers. Circulation, 86(4):1249-1256, 1992.



35. [GAYE-92] C. Gayet, M. Pillot, D. Revel, G. Finet, P. Buisson, and H. Milon. Diverticule de l'oreillette droite : description d'un cas et revue de la littérature. Arch Mal Coeur, 85:1479-1482, 1992.



36. [LE_B-92a] D. Le Bihan, R. Turner, P. Douek, and N. Patronas. Diffusion MR Imaging : clinical applications. Am J Roentgenol, 159:591-600, 1992.



37. [LISS-92] M. Lissac, J.L. Coudert, A. Briguet, and M. Amiel. Disturbances caused by dental materials in magnetic imaging. Intern Dent J, 42:229-233, 1992.



38. [MULH-92] A. Mulher, O. Clement, V. Vexler, Y. Berthezène, and R.C. Brasch. Hepatobiliary enhancement with Gd-EOB-DTPA. Comparison of spin-echo and STIR imaging for detection of experimental liver metastases. Radiology, 184:207-213, 1992.



39. [ROUS-92b] Jean Rousseau, Patrick Clarysse, David Gibon, Serge Blond, N. Bradaï, and Xavier Marchandise. A frameless method for 3D MRI- and CT- guided stereotaxic localization. Neuroradiology, 2:35-41, 1992.



40. [ROUS-92a] Jean Rousseau, David Gibon, Patrick Clarysse, J.P. Pruvo, Serge Blond, and Xavier Marchandise. Une méthode de repérage stéréotaxique par IRM. J Med Nucl Biophy, 16(4):374-379, 1992.



41. [BANA-91] S. Banai, M. Shou, R. Correa, M. Jaklitsch, P. Douek, R. Bonner, S. Epstein, and E. Unger. Rabbit ear model of injury-induced arterial smooth muscle cell proliferation. Kinetics, reproducibility and implications. Circ Res, 69:748-756, 1991.



42. [CLAR-91] P. Clarysse, D. Gibond, J. Rousseau, S. Blond, C. Vasseur, and X. Marchandise. A computer assisted system for 3D frameless localization in stereotaxic MRI. IEEE Trans Med Imaging, 10(4):523-529, 1991.



43. [DOUE-91a] P. Douek, M. Leon, H. Geschwind, P. Cook, P. Selzer, D. Miller, and R. Bonner. Multicenter trial with fluorescence-guided, pulsed by laser assisted balloon angioplasty in 129 patients with occlusive peripheral vascular disease. Radiology, 180:127-133, 1991.



44. [DOUE-91b] P. Douek, R. Turner, J. Pekar, N. Patronas, and D. Le Bihan. MR color mapping of myelin fiber orientation. J Comput Assist Tomogr, 15:923-929, 1991.



45. [GIBO-91] D. Gibon, P. Clarysse, J. Rousseau, S. Blond, R. Decool, and X. Marchandise. Station d'imagerie stéréotaxique en neurochirurgie et radiothérapie multifaisceaux. Bull Cancer / Radiother., 78:321-325, 1991.



46. [LIEZ-91] A. Liezorovicz, H. Picolet, J. Meximieux, J. P. Boissel, D. Revel, P. Chirossel, and M. Amiel. Prevention of peroperative deep vein thrombosis in general surgery : multi-center double blind study comparing two doses of Logiparin and standard heparin. Brit J Surg, 78:412-416, 1991.



47. [LISS-91] M. Lissac, D. Metrop, J.L. Coudert, P. Pimmel, A. Briguet, D. Revel, and M. Amiel. Dental materials and magnetic resonance imaging. Invest Radiol, 26:40-45, 1991.



48. [PICO-91] H. Picolet, A. Leizorovics, J.P. Boissel, D. Revel, P. Chirossel, and M. Amiel. Reliability of phlebographies for the assessment of venous thrombosis : a clinical trial. Hemostasis, 20:362-367, 1991.



49. [ROUS-91] J. Rousseau, P. Clarysse, S. Blond, D. Gibon, C. Vasseur, and X. Marchandise. Validation of a new method for stereotactic localization using MR Imaging. Journal of Computer Assisted Tomography, 15(2):291-296, 1991.

1. [CAST-10] Christopher Casta, Patrick Clarysse, Jérôme Pousin, Joël Schaerer, Pierre Croisille, and Yue-Min Zhu. Incorporating low-level constraints for the retrieval of personalised heart models from dynamic MRI. In Statistical Atlases and Computational Models of the Heart: Mapping Structure and Function (STACOM), MICCAI 2010 Workshop, volume LNCS 6364, pages 174-183, 2010. Springer-Verlag Berlin Heidelberg.



2. [GIRA-09] P.R. Girard. Quaternion Grassmann-Hamilton-Clifford algebras : new mathematical tools for classical and relativistic modeling. In World Congress 2009, Medical Physics and Biomedical Engineering, Munich, Germany, Sept 7-12 2009.



3. [GLAT-2008a] T. Glatard, K. Boulebiar, and S. Olabarriaga. Workflow integration in VL-e medical. In 21st IEEE International Symposium on Computer-Based Medical Systems (CBMS'08), Jyväskylä, Finland, pages 144-146, June 2008.



4. [GLAT-2008c] T. Glatard and J. Montagnat. Implementation of Turing machines with the Scufl data-flow language. In 3rd International Workshop on Workflow Systems in e-Science (WSES'08), Lyon, France, May 2008.



5. [GLAT-2008e] T. Glatard, J. Montagnat, and X. Pennec. A framework for evaluating the impact of compression on registration algorithms without gold standard. In International Conference on Image Processing (ICIP'08), San Diego, California, USA, pages 2912-2915, October 2008.



6. [GLAT-2008b] T. Glatard, J. Montagnat, and X. Pennec. A probabilistic model to analyse workflow performance on production grids. In IEEE International Symposium on Cluster Computing and the Grid (CCGrid'08), Lyon, France, pages 510-517, May 2008.



7. [GLAT-2008d] T. Glatard and S. Olabarriaga. From gridified scripts to workflows: the FSL Feat case. In MICCAI-Grid Workshop (MICCAI-Grid), New York, NY, USA, pages 33-42, September 2008.



8. [GLAT-2008f] T. Glatard and S. Olabarriaga. User friendly management of workflow results: from provenance information to grid logical file names. In 4th IEEE International Conference on e-Science (eScience'08), Indianapolis, USA, 2008.



9. [LING-2008] D. Lingrand, J. Montagnat, and T. Glatard. Estimating the execution context for refining submission strategies on production grids. In Assessing Models of Networks and Distributed Computing Platforms (ASSESS / ModernBio) (CCGrid'08), Lyon, France, pages 753-758, May 2008. IEEE.



10. [OLAB-2008] S. Olabarriaga, T. Glatard, K. Boulebiar, and P.T. de Boer. From 'low-hanging' to 'user-ready': initial steps into a healthgrid. In HealthGrid'08, Chicago, USA, pages 70-79, June 2008.



11. [SOLE-2008e] R.S. Soleman, T. Glatard, D.J. Veltman, A. Nederveen, and S. Olabarriaga. Large scale fMRI parameter study on a production grid. In MICCAI-Grid Workshop (MICCAI-Grid), New York, NY, USA, pages 65-74, September 2008.



12. [GLAT-2007a] Tristan Glatard, Diane Lingrand, Johan Montagnat, and Michel Riveill. Impact of the execution context on Grid job performances. In International Workshop on Context-Awareness and Mobility in Grid Computing (WCAMG'07) (CCGrid'07), Rio de Janeiro, Brazil, pages 713-718, May 2007. IEEE.



13. [GLAT-2007b] Tristan Glatard, Johan Montagnat, and Xavier Pennec. Optimizing jobs timeouts on clusters and production grids. In International Symposium on Cluster Computing and the Grid (CCGrid'07), Rio de Janeiro, Brazil, pages 100-107, May 2007. IEEE.



14. [NEMO-2007] Clémentine Nemo, Tristan Glatard, Mireille Blay-Fornarino, and Johan Montagnat. Merging overlapping orchestrations: an application to the Bronze Standard medical application. In International Conference on Services Computing (SCC 2007), Salt Lake City, Utah, USA, pages 364-371, July 2007. IEEE Computer Engineering.



15. [GLAT-2006c] T. Glatard, D. Emsellem, and J. Montagnat. Generic web service wrapper for efficient embedding of legacy codes in service-based workflows. In Grid-Enabling Legacy Applications and Supporting End Users Workshop (GELA'06), Paris, France, pages 44-53, June 2006.



16. [GLAT-2006b] T. Glatard, J. Montagnat, and X. Pennec. An experimental comparison of Grid5000 clusters and the EGEE grid. In Workshop on Experimental Grid testbeds for the assessment of large-scale distributed applications and tools (EXPGRID'06), Paris, France, June 2006.



17. [GLAT-2006d] T. Glatard, J. Montagnat, and X. Pennec. Efficient services composition for grid-enabled data-intensive applications. In IEEE International Symposium on High Performance Distributed Computing (HPDC'06), Paris, France, pages 333-334, June 2006.



18. [GLAT-06f] T. Glatard, J. Montagnat, and X. Pennec. Medical image registration algorithms assessment: Bronze Standard application enactment on grids using the MOTEUR workflow engine. In HealthGrid'06, Valencia, Spain, pages 93-103, June 2006. IOS Press.



19. [GLAT-2006e] T. Glatard, J. Montagnat, and X. Pennec. Probabilistic and dynamic optimization of job partitioning on a grid infrastructure. In 14th euromicro conference on Parallel, Distributed and network-based Processing (PDP06), Montbéliard-Sochaux, France, pages 231-238, February 2006.



20. [GLAT-2006a] T. Glatard, X. Pennec, and J. Montagnat. Performance evaluation of grid-enabled registration algorithms using bronze-standards. In Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), LNCS 4191, Copenhagen, Denmark, pages 152-160, October 2006. Springer.



21. [MONT-2006] J. Montagnat, T. Glatard, and D. Lingrand. Data composition patterns in service-based workflows. In Workshop on Workflows in Support of Large-Scale Science (WORKS'06), Paris, France, June 2006.



22. [BILL-05c] C. Billet, J.M. Dudley, N. Joly, and J.C. Knight. Evolution asymptotique intermédiaire et compression de similaritons dans une fibre ???? bande interdite photonique aux alentours de 1550 nm. In JNOG, Chambéry, France, pages 328-330, 2005.



23. [BILL-05d] C. Billet, J.M. Dudley, N. Joly, J.C. Knight, and P.St-J. Russel. Intermediate asymptotic evolution and photonic bandgap fibre compression of optical similaritons around 1550 nm. In Conference on Lasers and Electro-Optics Europe, Munich, Germany, pages 530-530, 2005.



24. [GIRA-05] P.R. Girard. Relativistic Moving Frame and Physical Applications within Clifford Algebra. In 7th International Conference on Clifford Algebras and Applications, Toulouse, May 2005.



25. [GLAT-2005a] T. Glatard, J. Montagnat, and X. Pennec. Grid-enabled workflows for data intensive medical applications. In 18th IEEE International Symposium on Computer-Based Medical Systems (CBMS), Dublin, Ireland, pages 537-542, June 2005.



26. [PIER-05] J.M. Pierson, L. Seitz, H. Duque, and J. Montagnat. MetaData for Efficient, Secure and Extensible Access to Data in a Medical Grid. In Database and Expert System Applications (DEXA'04), Zaragoza, Spain, pages 562-566, August 2005.



27. [VARE-05] S. Varette, S. Georget, J. Montagnat, J.L. Roch, and F. Leprevost. Distributed Authentication in GRID5000. In Grid Computing and its Application to Data Analysis (GADA'05), Agia Napa, Chyprus, November 2005.



28. [BILL-03d] C. Billet, J.M. Dudley, and G. Millot. Parabolic pulse generation at 1550 nm via Raman amplification in standard telecommunications grade dispersion shifted fiber. In CLEO, Munich, Allemagne, pages CL6-FRI, 2003.

1. [LIN-08a] D. Lingrand, J. Montagnat, and T. Glatard. Estimation of latency on production grid over several weeks. ICT4Health, February 2008.



2. [LING-07] Diane Lingrand, Tristan Glatard, and Johan Montagnat. Taking into account the execution context to optimize medical image databases indexation. Second Singaporean-French Biomedical Imaging Workshop (SFBI'07), August 2007.



3. [MONT-06c] Johan Montagnat, Tristan Glatard, Diane Lingrand, and Romain Texier. Exploiting production grid infrastructures for medical images analysis. First Singaporean-French Biomedical Imaging Workshop (SFBI'06), October 2006.

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