OutlineModelManager.cxx

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/*# ---------------------------------------------------------------------
#
# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
#                        pour la Sant�)
# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
# Previous Authors : Laurent Guigues, Jean-Pierre Roux
# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
#
#  This software is governed by the CeCILL-B license under French law and
#  abiding by the rules of distribution of free software. You can  use,
#  modify and/ or redistribute the software under the terms of the CeCILL-B
#  license as circulated by CEA, CNRS and INRIA at the following URL
#  http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
#  or in the file LICENSE.txt.
#
#  As a counterpart to the access to the source code and  rights to copy,
#  modify and redistribute granted by the license, users are provided only
#  with a limited warranty  and the software's author,  the holder of the
#  economic rights,  and the successive licensors  have only  limited
#  liability.
#
#  The fact that you are presently reading this means that you have had
#  knowledge of the CeCILL-B license and that you accept its terms.
# ------------------------------------------------------------------------ */


//----------------------------------------------------------------------------------------------------------------
// Class definition include
//----------------------------------------------------------------------------------------------------------------
#include "OutlineModelManager.h"

//----------------------------------------------------------------------------------------------------------------
// Class implementation
//----------------------------------------------------------------------------------------------------------------
//------------------------------------------------------------------------------------------------------------
// Constructors & Destructors
//------------------------------------------------------------------------------------------------------------
/*
        * Creates the outline manager
        */
        OutlineModelManager :: OutlineModelManager( SomeEnvironment<ImageSourceThing *> *imSourceEnv, SomeEnvironment<ImageSectionThing *> *imSectionEnv, SomeEnvironment<AxeThing *> *axesEnv, SomeEnvironment<ContourThing *> *contourEnv )
        {
                actualInstant                           = NULL;
                imageSourceEnvironment          = imSourceEnv;
                imagesSectionEnvironment        = imSectionEnv;
                axesEnvironment                         = axesEnv;
                outlinesEnvironment                     = contourEnv;

                workSpace                                       = new ContourWorkspace(this);//implies a shared workSpace
                keyGenerator                            = * new PrefixMaxKeyGenerator();
                counterIdKey                            = 0;

                actualInstantWrapping           = new InstantMembersNameList();
                changeSourceImage                       = true;

                bool allOK      = keyGenerator.addKeyThing("Axes", "Axe");
                allOK &= keyGenerator.addKeyThing("Image Sources", "Image source");
                allOK &= keyGenerator.addKeyThing("Image Sections", "Image section");
                allOK &= keyGenerator.addKeyThing("Outlines", "Outline");
                //setAutomaticConcepts();
        }

        /*
        * Destroys the outline manager
        */
        OutlineModelManager :: ~OutlineModelManager()
        {
                clean();
                delete actualInstant;
                delete workSpace;
                delete actualInstantWrapping;
        }

//------------------------------------------------------------------------------------------------------------
// Methods
//------------------------------------------------------------------------------------------------------------


        /*
        * Creates and sets a workSpace object
        * @return Retourns the created workSpace
        */
        ContourWorkspace * OutlineModelManager :: createWorkSpace()
        {
                workSpace = new ContourWorkspace(this);
                return workSpace;
        }

        /*
        * Sets the workSpace object
        * @param  aWorkSpace The workSpace to set
        */
        void OutlineModelManager :: setWorkSpace( ContourWorkspace * aWorkSpace )
        {
                workSpace = aWorkSpace;
        }

        /*
        * Executes a command over an outline object
        * @param imaKName Is the key name of the outline
        * @param theCommand Is the command to execute
        * @param fromRegistration Indicates if the execution is directed from the registration, by default comes from the GUI = false.
        */

        bool OutlineModelManager :: executeCommand_OutlineModel(std::string outKName, CommandObject * theCommand, bool fromRegistration)
        {
                ContourThing * theOutline = *outlinesEnvironment->getThingByName( outKName );
                if(!fromRegistration)
                {
                        CommandObject * undoCommand = theOutline->getUndoCommandOf( theCommand );
                        workSpace->callRegisterCommand(theCommand, undoCommand);
                }
                return theOutline->executeCommand( theCommand );
        }

        /*
        * Executes a command identifying which actions have to realize before executing it.
        * @param theCommand Is the command to execute
        * @param fromRegistration Indicates if the execution is directed from the registration, by default comes from the GUI = false.
        */
        bool OutlineModelManager :: executeCommand(CommandObject * theCommand, bool fromRegistration)
        {
                bool executedCom = true;
                //TODO**********************************************************************************************************************************************
                //Interpreting who is the one that executes the command

                //Modifiying the command in necessary for detaching interpreted information

                //If is an outline, sending the command to execute the specific command

                return executedCom;
        }

        /*
        * Executes a command queue identifying which actions have to realize before executing it, using FIFO for each.
        * @param executionQueue Is the command queue to execute
        * @param fromRegistration Indicates if the execution is directed from the registration, by default comes from the GUI = false.
        */
        bool OutlineModelManager ::  executeCommandsQueue(std::deque<CommandObject *> executionQueue, bool fromRegistration)
        {
                bool executedComs = executionQueue.size()>0 ? true : false;
                while( executionQueue.size()>0 )
                {
                        CommandObject * aCmmand = executionQueue.front();
                        executedComs &= executeCommand(aCmmand, fromRegistration);
                        executionQueue.pop_front();
                }
                return executedComs;
        }


        /*
        * Sets the concepts of the environments and includes the concepts managed by the program
        * @conceptsScript Is the script for with the concepts descrition
        * @return Returns true if successful insert of the given concepts, false otherwise
        */
        bool OutlineModelManager :: setUserConcepts(std::string conceptsScript)
        {
                bool allOK = true;
                int endSub;
                std::string::size_type equalIndex = conceptsScript.find("=", 0);
                std::string::size_type nextIndex = 0;
                while( equalIndex != std::string::npos && allOK)
                {
            endSub = equalIndex;
                        std::string concept = conceptsScript.substr( 0, endSub );
                        conceptsScript.erase( 0, endSub+1 );
                        std::cout << "C: " << concept <<std::endl;
                        nextIndex = conceptsScript.find(";", 0);
                        std::string cSize;
                        if(nextIndex != std::string::npos)
                        {
                                endSub = nextIndex;
                                cSize = conceptsScript.substr( 0, endSub );
                                conceptsScript.erase( 0, endSub+1 );
                        }
                        else
                        {
                                endSub = conceptsScript.size();
                                cSize = conceptsScript.substr( 0, endSub );
                                conceptsScript.erase( 0, endSub );
                        }
                        int intReturn = atoi(cSize.c_str());
                        std::cout << "SZ: "<<intReturn <<std::endl;
                        equalIndex = conceptsScript.find("=", 0);
                        if( intReturn>0 )
                                allOK &= addUserConcept(concept, intReturn);
                        else
                                allOK = false;
                }
                return allOK;
        }

        /*
        * Add a concept to all the environments
        * @param theConceptName Is the name of the new concept
        * @param conceptSize Is the size of the concept, that represent the ammount of concept posible instances
        * @return Returns true if successful insert of concept, false otherwise
        */
        bool OutlineModelManager :: addUserConcept(std::string theConceptName, int conceptSize)
        {
                bool allOK = axesEnvironment->addConcept(theConceptName, conceptSize);
                allOK &= imagesSectionEnvironment->addConcept(theConceptName, conceptSize);
                allOK &= imageSourceEnvironment->addConcept(theConceptName, conceptSize);
                allOK &= outlinesEnvironment->addConcept(theConceptName, conceptSize);
                return allOK;
        }

        std::vector<NameWrapper *> OutlineModelManager :: getActualInstantOutlines ()
        {
                return actualInstantWrapping->getOutlinesNamesVector();
        }

//EED01
        void OutlineModelManager :: ChangeContourOfList(std::string keyName, Instant *instant)
        {
                int ispartofstaticlist = IsPartOfStaticList(keyName);
                if (ispartofstaticlist==-1)
                {
                        staticContourLst.push_back(  this->outlinesEnvironment->getThingByName(keyName)  );
                        this->outlinesEnvironment->removeThingFromInstant(keyName, instant);
                } else {
                        ContourThing **contourthing  = staticContourLst[ispartofstaticlist];
                        this->outlinesEnvironment->addInstantToThing    ( keyName , instant );
                        staticContourLst.erase( staticContourLst.begin()+ispartofstaticlist );
                }
        }


        std::vector<ContourThing**>  OutlineModelManager :: getOutlinesAtInstant(Instant * anInstant, bool ifAnnotate)
        {
                std::vector<std::string> kNamesVector;
                std::vector<ContourThing **> outlinesVector; //= new std::vector<ContourThing **>();
                outlinesEnvironment->getThings( kNamesVector, outlinesVector, anInstant);

//EED01
                int i,sizeStaticContourLst =  staticContourLst.size();
                for ( i=0 ; i<sizeStaticContourLst ; i++ )
                {
                        ContourThing **contourthing  = staticContourLst[i];
                        outlinesVector.push_back( contourthing );
                        kNamesVector.push_back( (*contourthing)->getName() );
                }// for i

                if (ifAnnotate)
                {
                        annotateOutlinesWrap(kNamesVector, outlinesVector);
                }
                return outlinesVector;
        }

//EED01
        std::vector<std::string> OutlineModelManager :: GetLstNameThingsStatic()
        {
                std::vector<std::string> result;
                int i,sizeStaticContourLst =  staticContourLst.size();
                for ( i=0 ; i<sizeStaticContourLst ; i++ )
                {
                        ContourThing **contourthing  = staticContourLst[i];
                        result.push_back( (*contourthing)->getName() );
                }// for i
                return result;
        }

        std::vector<std::string> OutlineModelManager :: GetLstNameThings()
        {
                std::vector<std::string> kNamesVector;
                std::vector<ContourThing **> outlinesVector; //= new std::vector<ContourThing **>();
                std::vector<Instant *> lstInstants = getOutlineInstants();
                int i,sizeLstInstants = lstInstants.size();
                Instant *instant;
                for ( i=0 ; i<sizeLstInstants ; i++ )
                {
                        instant = lstInstants[i];
                        outlinesEnvironment->getThings( kNamesVector, outlinesVector, instant);
                } // for i
                return kNamesVector;
        }


        std::vector<ContourThing*> OutlineModelManager :: getOutlinesFromGroup(std::string aGroupName)
        {
                std::vector<ContourThing *> outlinesVector;
                std::map< std::string,OutlineGroup * >::iterator iterP = outlineGroups.find(aGroupName);
                if ( iterP != outlineGroups.end() )
                {
                        std::vector<std::string> kNamesVector = iterP->second->getGroupOutlinesNames();
                        for(int i=0; i<kNamesVector.size();i++)
                        {
                                ContourThing * outlineI = getOutlineByKeyName(kNamesVector[i]);
                                outlinesVector.push_back(outlineI);
                        }
                }
                return outlinesVector;
        }

        bool OutlineModelManager :: addOutlinesGroup( std::string theOutlineName, OutlineGroup * theGroup )
        {
        outlineGroups.insert(std::pair <std::string, OutlineGroup *> ( theOutlineName, theGroup ));
//              std::map<std::string, OutlineGroup *> :: iterator iter = NULL;
                std::map<std::string, OutlineGroup *> :: iterator iter;
                iter = outlineGroups.find( theOutlineName );
                bool ifAdded = iter->first.compare( theOutlineName ) == 0;
                return ifAdded;
        }
        /*
        * Gets the an outline given the keyName used to be indexed in the outlines's environment
        * @param outKName Is the outline keyName to search
        * @return  The corresponding unique outline with the given key name
        */
        ContourThing* OutlineModelManager :: getOutlineByKeyName(std::string outKName)
        {
                return *(outlinesEnvironment->getThingByName(outKName));
        }

        /*
        * Gets the an imageSourceThing given the keyName used to be indexed in the ImageSourceThing's environment
        * @param outKName Is the imageSourceThing keyName to search
        * @return  The corresponding unique outline with the given key name
        */
        ImageSourceThing* OutlineModelManager ::getImageSourceThingByKeyName(std::string iSeourceKName)
        {
                return *(imageSourceEnvironment->getThingByName(iSeourceKName));
        }

        /*
        * Gets the an imageSectionThing given the keyName used to be indexed in the ImageSectionThing's environment
        * @param outISectionName Is the imageSectionThing keyName to search
        * @return  The corresponding unique outline with the given key name
        */
        ImageSectionThing* OutlineModelManager ::getImageSectionThingByKeyName(std::string iSectionName)
        {
                return *(imagesSectionEnvironment->getThingByName(iSectionName));
        }

        /*
        * Creates an outlineThing with a given name, if no name is given it would have an automatic
        * @param aName The name for the outlineThing
                * @return Returns the key name of the created outline, or ""if it wasn't created
        */
//      bool OutlineModelManager :: createOutline(std::string aName, ContourThing * &theOutline)
        std::string  OutlineModelManager :: createOutline(manualBaseModel * model, std::vector<int> theInstantData, std::string aName)
        {
                ContourThing * theOutline = new ContourThing ( model );
                theOutline->setName(aName);
                return addOutline( theOutline, new Instant( &theInstantData ) );
        }

        /*
        * Creates an axeThing with a given name
        * @param aDescription The description for the axeThing
        * @return Returns true if the creation of the axe was successful
        */
        //bool OutlineModelManager :: createAxe(std::string aDescription, AxeThing * &theAxe)
        bool  OutlineModelManager :: createAxe(std::string aDescription, Instant * theInstantData)
        {
                AxeThing * theAxe = new AxeThing ();
                theAxe->setDescription(aDescription);
                return addAxe(theAxe, theInstantData);
        }

        /*
        * Creates an imageSourceThing with a given name
        * @param aSource The name for the imageSourceThing
        * @return Returns true if the creation of the imageSource was successful
        */
        //bool OutlineModelManager :: createImageSource(std::string aSource, ImageSourceThing * &imageSource)
        bool OutlineModelManager :: createImageSource(std::string aSource, Instant * theInstantData)
        {
//              imageSource = new ImageSourceThing(aSource);
                //return addImageSource(new ImageSourceThing(aSource), theInstantData);
                return NULL;//***********************************************************************************************
        }

        /*
        * Creates an imageSectionThing with a given name
        * @param aSecImageData The name for the imageSectionThing
        * @return Returns true if the creation of the imageSection was successful
        */
        //bool OutlineModelManager :: createImageSection(std::string aSecImageData, ImageSectionThing * &imageSection)
        bool OutlineModelManager :: createImageSection(std::string aSecImageData, Instant * theInstantData)
        {
                //imageSection = new ImageSectionThing(aSecImageData);
//              return addImageSection(new ImageSectionThing(aSecImageData), theInstantData);
                return NULL;
        }

        /*
        * Adds an outlineThing
        * @param theOutline The outline/contour (thing)
        * @param theInstantData Is the instant for the outline to add
        * @return Returns true if the addition of the outline was successful
        */
        std::string OutlineModelManager :: addOutline( ContourThing * theOutline, Instant * theInstantData)
        {
                std::string kName;

// EED
//              bool added  = keyGenerator.generateKeyOf("Outlines", outlinesEnvironment->getNumberOfThings(),kName);

                counterIdKey++;
                bool added = keyGenerator.generateKeyOf( "Outlines", counterIdKey , kName );

                if( theOutline->getName().compare("")==0 )
                {
                        theOutline->setName(kName);
                }
                added &= outlinesEnvironment->addThingWithInstant(kName,theOutline, theInstantData);
                if( added )
                        return kName;
                else
                        return "";
        }


        int OutlineModelManager::IsPartOfStaticList(std::string ss)
        {
                int iBack=-1;
                int i, size = staticContourLst.size();
                for( i=0 ; i<size ; i++ )
                {
                        ContourThing **contourthing  = staticContourLst[i];
                        if ((*contourthing)->getName() == ss)
                        {
                                iBack=i;
                        } // getName() == ss
                }
                return iBack;
        }


        /*
        * Remove an outlineThing
        * @param theOutline The outline/contour (thing)
        */
        void OutlineModelManager :: removeOutline( std::string ss )
        {
                        outlinesEnvironment->removeThing( ss );
        }

//EED01
        void OutlineModelManager :: removeAllOutlines()
        {
                //
                staticContourLst.clear();

                //
                std::vector< ContourThing **>  thingsVector;
                outlinesEnvironment->getThingsOfEnvironment( &thingsVector );
                int i,sizeThingVector = thingsVector.size();
                for(i=0;i<sizeThingVector;i++)
                {
                        ContourThing ** contourthing =  thingsVector[i];
                    removeOutline(  (*contourthing)->getName()   );
                }
        }


        /*
        * Adds an axeThing
        * @param thaAxe The axe (thing)
        * @param theInstantData Is the instant for the axe to add
        * @return Returns true if the addition of the axe was successful
        */
        bool OutlineModelManager :: addAxe( AxeThing * theAxe , Instant * theInstantData)
        {
                std::string kName;
                bool added  = keyGenerator.generateKeyOf("Axes", axesEnvironment->getNumberOfThings(),kName);
                added &= axesEnvironment->addThingWithInstant(kName,theAxe, theInstantData);
                return added;
        }

        /*
        * Adds an imageSourceThing
        * @param imgageSource The image source (thing)
        * @param theInstantData Is the instant for the source to add
        * @return Returns true if the addition of the imageSource was successful
        */
        bool OutlineModelManager :: addImageSource(ImageSourceThing * imageSource, Instant * theInstantData)
        {
                std::string kName;
                bool added  = keyGenerator.generateKeyOf("Image Sources", imageSourceEnvironment->getNumberOfThings(),kName);
                added &= imageSourceEnvironment->addThingWithInstant(kName,imageSource, theInstantData );
                return added;
        }

        /*
        * Adds an imageSectionThing with a given name, if no name is given it would have an automatic
        * @param aName The imageSection (thing)
        * @param theInstantData Is the instant for the imageSection to add
        * @return Returns true if the addition of the imageSection was successful
        */
        bool OutlineModelManager :: addImageSection(ImageSectionThing * imageSection, Instant * theInstantData)
        {
                std::string kName;
                bool added  = keyGenerator.generateKeyOf("Image Sections", imagesSectionEnvironment->getNumberOfThings(),kName);
                added &= imagesSectionEnvironment->addThingWithInstant(kName, imageSection, theInstantData);
                return added;
        }

        /*
        * Annotates an outline keyname at the actual instant
        * @param kOutlineName The key name to annotate
        * @param theRealName The real name asigned to the outline
        */
        void OutlineModelManager :: annotateOutlineWrap(std::string kOutlineName, std::string theRealName)
        {
                actualInstantWrapping -> addOutlineName(kOutlineName, theRealName);
        }

        /*
        * Annotates a set of outline keynames-real names wrapping at the actual instant
        * @param kNamesVector The key names vector to annotate
        * @param theOutlinesVector The outlines pointers vector to get the real names from
        */
        void OutlineModelManager :: annotateOutlinesWrap(std::vector<std::string> kNamesVector, std::vector<ContourThing **> theOutlinesVector)
        {
                actualInstantWrapping ->clean();
                for(int i=0; i<kNamesVector.size(); i++)
                {
                        ContourThing * anOutline = *theOutlinesVector[i];
                        actualInstantWrapping -> addOutlineName( kNamesVector[i], anOutline->getName() );
                }
        }

        /*
        * Annotates the actual outline keyName-real name wrapping at the actual instant
        * @param actualKeyOutline The key name to annotate
        * @param theRealName The real name asigned to the actual outline
        */
        void OutlineModelManager :: annotateActualOutlineWrap(std::string actualKeyOutline, std::string theRealName)
        {
                actualInstantWrapping -> setActualOutline(actualKeyOutline, theRealName);
        }

        /*
        * Annotate the actual axe keyName-real name wrapping at the actual instant
        * @param actualKeyAxe The key name to annotate
        * @param theRealName The real name asigned to the actual axe
        */
        void OutlineModelManager :: annotateActualAxeWrap(std::string actualKeyAxe, std::string theRealName)
        {
                actualInstantWrapping -> setActualAxeWrap(actualKeyAxe, theRealName);
        }

        /*
        * Annotate the annotateActualSection image keyName-real name wrapping at the actual instant
        * @param actualKeyImage The key name to annotate
        * @param theRealName The real name asigned to the annotateActualSection
        */
        void OutlineModelManager :: annotateActualSectionImageWrap(std::string actualKeyImage, std::string theRealName)//---BORRAR...
        {
                actualInstantWrapping -> setActualSectionImageNamesWrapp(actualKeyImage, theRealName);
        }

        /*
        * Annotate the annotateActualSource image keyName-real name wrapping at the actual instant
        * @param actualKeyImage The key name to annotate
        * @param theRealName The real name asigned to the annotateActualSource
        */
        void OutlineModelManager :: annotateActualSourceImageWrap(std::string actualKeyImage, std::string theRealName)//---BORRAR...
        {
                actualInstantWrapping -> setActualSourceImageNamesWrapp(actualKeyImage, theRealName);
        }


        /*
        * Sets the actual instant and manage the search of the corresponding elements with the specified instant in all the enviornments
        * @param newActualInstantData Is the instant data
        */
        void OutlineModelManager :: setInstant(Instant * newActualInstantData)
        {
                actualInstant = newActualInstantData;
                updateToActualInstant();
        }

        Instant* OutlineModelManager :: getInstant()
        {
                return actualInstant;
        }

        /*
        * Gets the an axe with a given keyName
        * @axeKName The axe keyName for searching in the axes environment
        * @return The corresponding axe
        */
        AxeThing * OutlineModelManager :: getAxeByKeyName(std::string axeKName)
        {
                return *axesEnvironment->getThingByName(axeKName);
        }

        /*
        * Gets the instants of a specific outline
        * @param thekName Is the name of the outline
        * @return The instants set
        */
        std::vector<Instant *> OutlineModelManager :: getOutlineInstantsByName(std::string thekName)
        {
                return *outlinesEnvironment->getInstantsOfThing(thekName);
        }

        /*
        * Gets all instants outlines
        * @return The instants set
        */
        std::vector<Instant *> OutlineModelManager :: getOutlineInstants()
        {
                return *outlinesEnvironment->getExistingInstants();
        }



        /*
        * Includes an instant to the specified axe
        * @param outKName Is outline key name
        * @param anInstantData Is the instant data
        * @return Returns if the insertion was successful or not
        */
        bool OutlineModelManager :: includeOutlineInstant(std::string outKName,Instant * anInstantData)
        {
                return outlinesEnvironment->addInstantToThing(outKName,anInstantData);
        }

        /*
        * Includes an instant to the specified axe
        * @param axeKName Is axe key name
        * @param anInstantData Is the instant data
        * @return Returns if the insertion was successful or not
        */
        bool OutlineModelManager :: includeAxeInstant(std::string axeKName,Instant * anInstantData)
        {
                return axesEnvironment->addInstantToThing( axeKName,anInstantData );
        }

        /*
        * Includes an instant to the specified image section
        * @param imaKName Is the image section key name
        * @param anInstantData Is the instant data
        * @return Returns if the insertion was successful or not
        */
        bool OutlineModelManager :: includeImageSectionInstant(std::string imaKName,Instant * anInstantData)
        {
                return imagesSectionEnvironment->addInstantToThing( imaKName,anInstantData );
        }

        /*
        * Includes an instant to the specified image source
        * @param imaKName Is the image section key name
        * @param anInstantData Is the instant data
        * @return Returns if the insertion was successful or not
        */
        bool OutlineModelManager :: includeImageSourceInstant(std::string imaKName,Instant * anInstantData)
        {
                return imageSourceEnvironment->addInstantToThing( imaKName,anInstantData );
        }

        /*
        *       Method that retorns the name of each concept and the size of it.
        *       @param conceptNameVect, Vector in which is disposed to be setted the name for each of the included concepts
        *       @param conceptSizeVect, Vector in which is disposed to be setted the size for each of the included concepts
        */
        void OutlineModelManager :: getConceptsInformation(std::vector<std::string>& conceptNameVect, std::vector<int>& conceptSizeVect)
        {
                if( outlinesEnvironment != NULL )
                {
                        //if (outlinesEnvironment->getNumberOfThings()>0)
                                outlinesEnvironment->getConceptsInformation(conceptNameVect, conceptSizeVect);
                }
        }


        /*
        * Gets the contourWorspace
        * @return Returns the workspace
        */
        ContourWorkspace * OutlineModelManager :: getContourWorkspace()
        {
                return workSpace;
        }


        /*
        * Cleans the outline model manager and its dependencies
        */
        void OutlineModelManager :: clean()
        {
                /*axesEnvironment->clean();
                imagesSectionEnvironment->clean();
                imageSourceEnvironment->clean();
                outlinesEnvironment->clean();*/
                outlineGroups.clear();
                actualInstantWrapping->clean();
                keyGenerator.clear();
                //workSpace->clear();
        }

        /*
        * Update the registered objects in the InstantMemebersNameList, is the one that really changes the instant in the model
        */
        void OutlineModelManager :: updateToActualInstant()
        {
                Instant * longInstant = actualInstant;
                /*Instant * mediumInstant = new Instant();
                Instant * shortInstant = new Instant();
                std::vector<int>* theInstant = longInstant->getInstant();
                for(int i=1; i<theInstant->size(); i++)
                {
                        if (i>=2)
                                shortInstant->addConcept( (*theInstant)[i] );
                        mediumInstant->addConcept( (*theInstant)[i] );
                }

                //getting the sourceAtInstant
                std::vector<std::string> kSourceVector;
                std::vector<ImageSourceThing **> imSourceVector;
                imageSourceEnvironment->getThings(kSourceVector, imSourceVector, shortInstant);
                annotateActualSourceImageWrap(kSourceVector[0], (**imSourceVector[0]).getSourceImage());

        //getting the aAxeAtInstant
                std::vector<std::string> kAxeVector;
                std::vector<AxeThing **> axesVector;
                axesEnvironment->getThings(kAxeVector, axesVector, mediumInstant);
                if ( !kAxeVector.empty() )
                        annotateActualAxeWrap(kAxeVector[0], (**axesVector[0]).getDescription());

                //getting the sectionAtInstant
                std::vector<std::string> kSectionVector;
                std::vector<ImageSectionThing **> imSectionVector;
                imagesSectionEnvironment->getThings(kSectionVector, imSectionVector, longInstant); if ( !kSectionVector.empty() )
            //annotateActualSectionImageWrap(kSectionVector[0], (**imSectionVector[0]).getImageData());
                */

                //getting the outlines

                std::vector<ContourThing ** > vect = getOutlinesAtInstant( longInstant );

        }

        /*
        * Sets the automatic managed concepts including them in the environments. That are at the beginning of the instant vector for the corresponding environments.
        * @return Returns true if successful insert of the automatic concepts, false otherwise
        */
        bool OutlineModelManager :: setAutomaticConcepts()
        {
                axeConcept = "Axe";
                axeDepthConcept = "Axe Depth";
                int axeC_size = 10;
                int axeDepthC_size = INT_MAX;

                bool allOK = axesEnvironment->addConcept(axeConcept, axeC_size);
                allOK &= imagesSectionEnvironment->addConcept(axeConcept, axeC_size);
                allOK &= outlinesEnvironment->addConcept(axeConcept, axeC_size);

                allOK &= imagesSectionEnvironment->addConcept(axeDepthConcept, axeDepthC_size);
                allOK &= outlinesEnvironment->addConcept(axeDepthConcept, axeDepthC_size);
/*
                allOK &= keyGenerator.addKeyThing("Axes", "Axe");
                allOK &= keyGenerator.addKeyThing("Image Sources", "Image source");
                allOK &= keyGenerator.addKeyThing("Image Sections", "Image section");
                allOK &= keyGenerator.addKeyThing("Outlines", "Outline");*/

                return allOK;
        }


        std::string OutlineModelManager :: createCopyContourOf( std::string anExistingKName, std::vector<int> &instantNoTouchData )
        {
                manualBaseModel * manModelContour  = getOutlineByKeyName( anExistingKName )->getModel()->Clone();
                return createOutline( manModelContour, instantNoTouchData );
        }

        void OutlineModelManager::SaveThingName( FILE *pFile, FILE *pFileData, std::string nameThing )
        {
                std::vector< Instant * > *lstInstants;
                lstInstants = outlinesEnvironment->getInstantsOfThing( nameThing );
                Instant *instant = (*lstInstants)[0];
                std::vector<int> *vecInst =instant->getInstant();
                int i,sizeVecInst = vecInst->size();
                fprintf(pFile,"Instant ");
                for ( i=0 ; i<sizeVecInst ; i++ )
                {
                        fprintf(pFile,"%d ",(*vecInst)[i]);
                }
                fprintf(pFile,"\n");
                ContourThing *contourthing = *outlinesEnvironment->getThingByName(nameThing);
                contourthing->getModel()->Save(pFile);
                contourthing->getModel()->SaveData(pFileData);
        }