OsirixParser.h

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/*# ---------------------------------------------------------------------
#
# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
#                        pour la Sant�)
# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
# Previous Authors : Laurent Guigues, Jean-Pierre Roux
# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
#
#  This software is governed by the CeCILL-B license under French law and
#  abiding by the rules of distribution of free software. You can  use,
#  modify and/ or redistribute the software under the terms of the CeCILL-B
#  license as circulated by CEA, CNRS and INRIA at the following URL
#  http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
#  or in the file LICENSE.txt.
#
#  As a counterpart to the access to the source code and  rights to copy,
#  modify and redistribute granted by the license, users are provided only
#  with a limited warranty  and the software's author,  the holder of the
#  economic rights,  and the successive licensors  have only  limited
#  liability.
#
#  The fact that you are presently reading this means that you have had
#  knowledge of the CeCILL-B license and that you accept its terms.
# ------------------------------------------------------------------------ */

#ifndef __OsirixParser__
#define __OsirixParser__


#if defined(_WIN32)
#include "Windows.h"
  #ifdef kernelParserOsirix_BUILD_SHARED
    #define kernelParserOsirix_EXPORT __declspec( dllexport )
  #else
    #define kernelParserOsirix_EXPORT __declspec( dllimport )
  #endif
  #define kernelParserOsirix_CDECL __cdecl
#else
  #define kernelParserOsirix_EXPORT
  #define kernelParserOsirix_CDECL
#endif // defined(_WIN32)

//------------------------------------------------------------------------------------------------------------
// Includes
//------------------------------------------------------------------------------------------------------------

#include <iostream>
#include <vector>
#include <map>
#include <xercesc/parsers/XercesDOMParser.hpp>
#include <xercesc/dom/DOM.hpp>
#include <xercesc/dom/DOMErrorHandler.hpp>
#include <xercesc/dom/DOMLocator.hpp>
#include <xercesc/sax/HandlerBase.hpp>
#include <xercesc/util/XMLString.hpp>
#include <xercesc/util/PlatformUtils.hpp>


using namespace std;
using namespace xercesc;



class OsirixParser{

//------------------------------------------------------------------------------------------------------------
// Constructors & Destructors
//------------------------------------------------------------------------------------------------------------
public:

        OsirixParser(std::string xsdfile = "", double* spacing = NULL, int* extent = NULL);
        ~OsirixParser();        

        int ParseFile(const char* xmlfile);
        
        
        std::string getErrorLine();

        std::string getContoursFileName();

        // Return ROI as lists of points
        const std::map<int, vector< vector<double> > >& getContoursMapMM() {
          return contoursmapMM;
        }
        const std::map<int, vector< vector<double> > >& getContoursMapPX() {
          return contoursmapPX;
        }

        // Return ROI names
        const std::map<int, std::string>& getContoursNameMM() {
          return contoursnameMM;
        }
        const std::map<int, std::string>& getContoursNamePX() {
          return contoursnamePX;
        }

private:

        std::string schema;

        std::string errorline;  

        int _imageindex;
        std::string _roiname;

        const char* OSIRIX_DICT;
        const char* OSIRIX_KEY;
        const char* OSIRIX_IMAGES;
        const char* OSIRIX_ARRAY;
        const char* OSIRIX_IMAGEINDEX;
        const char* OSIRIX_INTEGER;
        const char* OSIRIX_NUMBEROFROIS;
        const char* OSIRIX_ROIS;
        const char* OSIRIX_POINT_MM;
        const char* OSIRIX_POINT_PX;
        const char* OSIRIX_STRING;              
        const char* OSIRIX_NAME;

        const char* CREACONTOUR;
        const char* CREACONTOUR_VERSION;
        const char* CREACONTOUR_IMAGEDIMENSIONS;
        const char* CREACONTOUR_IMAGESPACING;
        const char* CREACONTOUR_NUMBEROFCONTOURS;

        const char* CREACONTOUR_INSTANT;
        const char* CREACONTOUR_TYPEMODEL;
        const char* CREACONTOUR_NUMBEROFCONTROLPOINTS;
        const char* CREACONTOUR_TYPEVIEW;       
        
        const char* CREACONTOUR_NUMBEROFCONTOURSSTATIC;

        std::string TEMPIMPORTOSIRIXFILE;

        double _spacing[3];
        int _extent[6];

        typedef vector< vector<double> > vectorXYZ;
        std::map<int, vectorXYZ> contoursmapMM; 
        std::map<int, vectorXYZ> contoursmapPX;

        std::map<int, std::string> contoursnameMM;
        std::map<int, std::string> contoursnamePX;

        void saveCreaContoursFormat();

        void writeHeader(FILE* pFile);
        void writeContours(FILE* pFile);
        void writeContoursStatic(FILE* pFile);

        void setErrorLine(DOMNodeList* list);   

        void getUserData(DOMElement* element);  

        void getData(DOMNodeList* list, std::vector<std::string>& vect, std::string tagname);

        DOMNode* getLastNode(DOMNodeList* list);

        void parseOSIRIX_DICT(DOMNodeList* list);
        void parseOSIRIX_POINT_MM(DOMNodeList* list);
        void parseOSIRIX_POINT_PX(DOMNodeList* list);

        

        
};

class OsirixParserErrorHandler : public ErrorHandler{

//------------------------------------------------------------------------------------------------------------
// Constructors & Destructors
//------------------------------------------------------------------------------------------------------------
public:

        OsirixParserErrorHandler();
        ~OsirixParserErrorHandler();    

        virtual void    warning (const SAXParseException &exc);         

        virtual void    error (const SAXParseException &exc);           

        virtual void    fatalError (const SAXParseException &exc);              

        virtual void    resetErrors ();

        std::string getErrorMsg();

private:

        
        std::string errormsg;

        

        
        
};
#endif