gdcmSeqEntry.cxx

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/*=========================================================================
                                                                                
  Program:   gdcm
  Module:    $RCSfile: gdcmSeqEntry.cxx,v $
  Language:  C++
  Date:      $Date: 2007/07/26 08:36:49 $
  Version:   $Revision: 1.69 $
                                                                                
  Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
  l'Image). All rights reserved. See Doc/License.txt or
  http://www.creatis.insa-lyon.fr/Public/Gdcm/License.html for details.
                                                                                
     This software is distributed WITHOUT ANY WARRANTY; without even
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     PURPOSE.  See the above copyright notices for more information.
                                                                                
=========================================================================*/

#include "gdcmSeqEntry.h"
#include "gdcmSQItem.h"
#include "gdcmTS.h"
#include "gdcmGlobal.h"
#include "gdcmUtil.h"
#include "gdcmDebug.h"

#include <iostream>
#include <iomanip>
#include <fstream>

namespace GDCM_NAME_SPACE 
{
//-----------------------------------------------------------------------------
// Constructor / Destructor

// Constructor / Destructor
SeqEntry::SeqEntry( uint16_t group,uint16_t elem ) 
             : DocEntry(group, elem, "SQ")
{
   Length       = 0;
   ReadLength   = 0xffffffff;
   SQDepthLevel = -1;

   DelimitorMode = false;
   SeqTerm  = NULL;
}

SeqEntry::SeqEntry( DocEntry *e, int depth )
             //: DocEntry( e->GetDictEntry() )
            : DocEntry( e->GetGroup(), e->GetElement(), "SQ" /*e->GetVR()*/ )
{
   Length       = 0;
   ReadLength   = 0xffffffff;
   SQDepthLevel = depth;

   ImplicitVR   = e->IsImplicitVR();
   Offset       = e->GetOffset();
   SeqTerm = NULL;
}

SeqEntry::~SeqEntry()
{
   ClearSQItem();
}

//-----------------------------------------------------------------------------
// Public
/*
 * \brief   canonical Writer
 * @param fp pointer to an already open file
 * @param filetype type of the file (ACR, ImplicitVR, ExplicitVR, ...)
 */
void SeqEntry::WriteContent(std::ofstream *fp, FileType filetype, bool dummy)
{
   uint16_t seq_term_gr = 0xfffe;
   uint16_t seq_term_el = 0xe0dd;
   uint32_t seq_term_lg = 0x00000000;
 
   // ignore 'Zero length' Sequences
   if ( GetReadLength() == 0 )
      return;
   // false : we are not in MetaElements
   DocEntry::WriteContent(fp, filetype, false);
   for(ListSQItem::iterator cc  = Items.begin();
                            cc != Items.end();
                          ++cc)
   {   
      (*cc)->WriteContent(fp, filetype, false);
   }
   
   // we force the writting of a Sequence Delimitation item
   // because we wrote the Sequence as a 'no Length' sequence
   binary_write(*fp, seq_term_gr);
   binary_write(*fp, seq_term_el);
   binary_write(*fp, seq_term_lg);
}

uint32_t SeqEntry::ComputeFullLength()
{
   uint32_t l = 12; // Tag (4) + VR (explicit) 4 + 4 (length);   
   for(ListSQItem::iterator cc  = Items.begin();
                            cc != Items.end();
                          ++cc)
   {        
      l += (*cc)->ComputeFullLength();
   }   
   l += 8; // seq_term Tag (4) +  seq_term_lg (4)
   return l;
}

void SeqEntry::AddSQItem(SQItem *sqItem, int itemNumber)
{
// FIXME : SQItemNumber is supposed to be the ordinal number of the SQItem
//         within the Sequence.
//         Either only 'push_back' is allowed, 
//                and we just have to do something like SeqEntry::lastNb++
//         Or we can add (or remove) anywhere, and SQItemNumber will be broken
   sqItem->SetSQItemNumber(itemNumber);
   Items.push_back(sqItem);
   sqItem->Register();
}

void SeqEntry::ClearSQItem()
{
   for(ListSQItem::iterator cc = Items.begin(); cc != Items.end(); ++cc)
   {
      (*cc)->Unregister();
   }
   if (SeqTerm)
   {
      SeqTerm->Unregister();
   }
}

SQItem *SeqEntry::GetFirstSQItem()
{
   ItSQItem = Items.begin();
   if (ItSQItem != Items.end())
      return *ItSQItem;
   return NULL;
} 

SQItem *SeqEntry::GetNextSQItem()
{
   gdcmAssertMacro (ItSQItem != Items.end())
   {
      ++ItSQItem;
      if (ItSQItem != Items.end())
         return *ItSQItem;
   }
   return NULL;
}
 
SQItem *SeqEntry::GetSQItem(int nb)
{
   if (nb<0)
   {
      return *(Items.begin());
   }
   int count = 0 ;
   for(ListSQItem::iterator cc = Items.begin();
                           cc != Items.end();
                           count ++, ++cc)
   {
      if (count == nb)
      {
         return *cc;
      }
   }
   return *(Items.end());
}

unsigned int SeqEntry::GetNumberOfSQItems()
{
   return Items.size();
}

void SeqEntry::SetDelimitationItem(DocEntry *e)
{
   if( SeqTerm != e )
   {
      if( SeqTerm )
         SeqTerm->Unregister();
      SeqTerm = e;
      if( SeqTerm )
         SeqTerm->Register();
   }
}

void SeqEntry::Copy(DocEntry *doc)
{
   // Delete previous SQ items
   ClearSQItem();

   DocEntry::Copy(doc);
   SeqEntry *entry = dynamic_cast<SeqEntry *>(doc);
   if ( entry )
   {
      DelimitorMode = entry->DelimitorMode;
      SQDepthLevel = entry->SQDepthLevel;

      SeqTerm = entry->SeqTerm;
      if(SeqTerm)
         SeqTerm->Register();
      Items = entry->Items;
      for(ItSQItem = Items.begin();ItSQItem != Items.end(); ++ItSQItem)
      {
         (*ItSQItem)->Register();
      }
   }
}

//-----------------------------------------------------------------------------
// Protected

//-----------------------------------------------------------------------------
// Private

//-----------------------------------------------------------------------------
// Print
void SeqEntry::Print( std::ostream &os, std::string const & )
{
   // First, Print the Dicom Element itself.
   os << "S ";
   DocEntry::Print(os);
   os << std::endl;

   if (GetReadLength() == 0)
      return;

   // Then, Print each SQ Item   
   for(ListSQItem::iterator cc = Items.begin(); cc != Items.end(); ++cc)
   {
      (*cc)->SetPrintLevel(PrintLevel);
      (*cc)->Print(os);   
   }

   // at end, print the sequence terminator item, if any
   if (DelimitorMode)
   {
      int i;
      for ( i = 0; i < SQDepthLevel; i++ )
         os << "   | " ;
      os << " --- "  << std::endl;
      for ( i = 0; i < SQDepthLevel; i++ )
         os << "   | " ;
      if (SeqTerm != NULL)
      {
         SeqTerm->SetPrintLevel(PrintLevel);
         SeqTerm->Print(os);
         os << std::endl;
      } 
      else 
      {
         // fuse
         gdcmWarningMacro("  -------- should have a sequence terminator item");
      }
   }
}

//-----------------------------------------------------------------------------
} // end namespace gdcm

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