[pubgit-commits-list] cpPlugins branch master updated. v0.1-1-g2e142df

root root at tux.creatis.insa-lyon.fr
Mon Jul 2 16:12:58 CEST 2018


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- Log -----------------------------------------------------------------
http://git.creatis.insa-lyon.fr/pubgit/?p=cpPlugins.git;a=commitdiff;h=2e142df11d6f312a2a2b5097b8da73571ed523e8
commit 2e142df11d6f312a2a2b5097b8da73571ed523e8
Author: Leonardo Florez-Valencia <florez-l at javeriana.edu.co>
Date:   Mon Jul 2 16:12:29 2018 +0200

    Moved to version 1.0


-----------------------------------------------------------------------

Summary of changes:
 CMakeLists.txt                                     |    87 +-
 README.md                                          |     4 +
 appli/CMakeLists.txt                               |    11 +-
 appli/PipelineEditor/CMakeLists.txt                |    31 +-
 appli/PipelineEditor/PipelineEditor.cxx            |   172 +-
 appli/PipelineEditor/PipelineEditor.h              |    34 +-
 appli/PipelineEditor/PipelineEditor.ui             |   132 +-
 appli/PipelineEditor/PluginsNavigator.cxx          |    88 +
 appli/PipelineEditor/PluginsNavigator.h            |    37 +
 appli/bash/CMakeLists.txt                          |    34 +
 appli/bash/ExecutePipeline.cxx                     |   143 +
 appli/bash/HostCreator.cxx                         |   249 +
 appli/bash/InteractivePipelineCreator.cxx.d        |   319 +
 appli/bash/MOC.cxx                                 |   438 +
 appli/examples/CMakeLists.txt                      |    29 +
 appli/examples/ComplexAppend.cxx                   |    88 +
 appli/examples/Parameters.cxx                      |    56 +
 appli/examples/ReadRawFile_00.cxx                  |    36 +
 appli/examples/ReadRawFile_01.cxx                  |    40 +
 appli/examples/ReadRawFile_02.cxx                  |    36 +
 appli/examples/ReadWriteRawFile_00.cxx             |    38 +
 appli/examples/ReadWriteRawFile_01.cxx             |    45 +
 appli/examples/ReadWriteRawFile_02.cxx             |    37 +
 bash/CMakeLists.txt                                |    25 -
 bash/Config.h.in                                   |   274 -
 bash/CreateDemanglers.cxx                          |   121 -
 bash/CreateInstances.cxx                           |   168 -
 bash/CreateRealConfig.cxx                          |    37 -
 bash/HostCreator.cxx                               |   193 -
 cmake/BaseConfig.cmake                             |    51 -
 cmake/CMakeLists.txt                               |    22 +-
 cmake/Functions.cmake                              |   328 -
 cmake/KitwareTools.cmake                           |    19 -
 cmake/Options.cmake                                |    25 -
 cmake/QtTools.cmake                                |    26 -
 cmake/cpPlg3rdParty.cmake                          |    31 +
 cmake/cpPlgDefinitions.cmake                       |    37 +
 cmake/cpPlgFunctions.cmake                         |   414 +
 cmake/cpPlgInstallCommands.cmake                   |    47 +
 cmake/cpPlgUninstall.cmake.in                      |    27 +
 cmake/cpPluginsConfig.cmake.in                     |   143 +-
 data/data.wxml                                     |    88 -
 data/read_write_image.wxml                         |    12 -
 dependencies/cpPlugins_Install_CMAKE.sh            |   198 -
 dependencies/cpPlugins_Install_Dependencies.py     |   383 -
 dependencies/cpPlugins_Install_ITK.sh              |   216 -
 dependencies/cpPlugins_Install_QT4.sh              |   219 -
 dependencies/cpPlugins_Install_VTK.sh              |   256 -
 dependencies/cpPlugins_ThirdParty_Install_linux.sh |   317 -
 dependencies/dependencies.py                       |   328 -
 dependencies/qt-4.8.6_MAC.patch                    |    18 -
 docs/CMakeLists.txt                                |    33 +
 docs/Doxyfile.in                                   |  2498 ++
 docs/uml/cpPlugins.dia                             |   Bin 0 -> 3421 bytes
 install/macos/clean_libs.sh                        |    13 -
 install/macos/prepare_libs.sh                      |    46 -
 install/macos/relink_lib.sh                        |    36 -
 lib/CMakeLists.txt                                 |    95 +-
 lib/QCustomPlot/GPL.txt                            |   674 -
 lib/QCustomPlot/QCustomPlot.cxx                    | 23553 -------------------
 lib/QCustomPlot/QCustomPlot.h                      |  3772 ---
 lib/QCustomPlot/changelog.txt                      |   432 -
 lib/TinyCon/CompletionConsole.cxx                  |   183 +
 lib/TinyCon/CompletionConsole.h                    |    47 +
 lib/TinyCon/Console.cxx                            |   417 +
 lib/TinyCon/Console.h                              |    71 +
 lib/TinyCon/README                                 |    84 +
 lib/TinyCon/Trie.cxx                               |   154 +
 lib/TinyCon/Trie.h                                 |    52 +
 lib/cpBaseQtApplication/Blocker.cxx                |    67 -
 lib/cpBaseQtApplication/Blocker.h                  |    30 -
 lib/cpBaseQtApplication/MainHelper.h               |    90 -
 lib/cpBaseQtApplication/MainWindow.cxx             |   309 -
 lib/cpBaseQtApplication/MainWindow.h               |   136 -
 lib/cpBaseQtApplication/Pipeline/Block.cxx         |   418 -
 lib/cpBaseQtApplication/Pipeline/Block.h           |   120 -
 lib/cpBaseQtApplication/Pipeline/Canvas.cxx        |   452 -
 lib/cpBaseQtApplication/Pipeline/Canvas.h          |    83 -
 lib/cpBaseQtApplication/Pipeline/Connection.cxx    |   135 -
 lib/cpBaseQtApplication/Pipeline/Connection.h      |    60 -
 lib/cpBaseQtApplication/Pipeline/EventFilter.cxx   |   227 -
 lib/cpBaseQtApplication/Pipeline/EventFilter.h     |    96 -
 lib/cpBaseQtApplication/Pipeline/Port.cxx          |   358 -
 lib/cpBaseQtApplication/Pipeline/Port.h            |   216 -
 lib/cpBaseQtApplication/Plugins/Navigator.cxx      |    92 -
 lib/cpBaseQtApplication/Plugins/Navigator.h        |    39 -
 lib/cpExtensions/Algorithms/BezierCurveFunction.h  |    77 -
 .../Algorithms/BezierCurveFunction.hxx             |   155 -
 lib/cpExtensions/Algorithms/CPRImageFilter.h       |    76 -
 lib/cpExtensions/Algorithms/CPRImageFilter.hxx     |   127 -
 .../Algorithms/DiscontinuityMapImageFilter.h       |    66 -
 .../Algorithms/DiscontinuityMapImageFilter.hxx     |    91 -
 lib/cpExtensions/Algorithms/FluxMedialness.h       |    74 -
 lib/cpExtensions/Algorithms/FluxMedialness.hxx     |   108 -
 .../Algorithms/GaussianDensityImageFilter.h        |   103 -
 .../Algorithms/GradientImageFunctionBase.h         |    79 -
 .../Algorithms/GradientImageFunctionBase.hxx       |    72 -
 lib/cpExtensions/Algorithms/GulsunTekMedialness.h  |    76 -
 .../Algorithms/GulsunTekMedialness.hxx             |   114 -
 lib/cpExtensions/Algorithms/ImageBlender.cxx       |   234 -
 lib/cpExtensions/Algorithms/ImageBlender.h         |    65 -
 lib/cpExtensions/Algorithms/ImageFunctionFilter.h  |    69 -
 .../Algorithms/ImageFunctionFilter.hxx             |    67 -
 lib/cpExtensions/Algorithms/ImageFunctorFilter.h   |    68 -
 lib/cpExtensions/Algorithms/ImageFunctorFilter.hxx |    65 -
 .../Algorithms/ImageToBoundingBoxFromThreshold.h   |    78 -
 .../Algorithms/ImageToBoundingBoxFromThreshold.hxx |    89 -
 lib/cpExtensions/Algorithms/InertiaMedialness.h    |   215 -
 .../Algorithms/InertiaTensorFunction.h             |   180 -
 lib/cpExtensions/Algorithms/IsoImageSlicer.h       |   185 -
 lib/cpExtensions/Algorithms/IsoImageSlicer.hxx     |   234 -
 .../Algorithms/IterativeGaussianModelEstimator.h   |   171 -
 .../Algorithms/IterativeGaussianModelEstimator.hxx |   365 -
 .../Algorithms/KalmanConstantFilter.cxx            |    49 -
 lib/cpExtensions/Algorithms/KalmanConstantFilter.h |    56 -
 lib/cpExtensions/Algorithms/KalmanFilter.cxx       |   137 -
 lib/cpExtensions/Algorithms/KalmanFilter.h         |   213 -
 lib/cpExtensions/Algorithms/KalmanFilter.hxx       |    37 -
 .../Algorithms/KalmanVelocityFilter.cxx            |    90 -
 lib/cpExtensions/Algorithms/KalmanVelocityFilter.h |    66 -
 .../Algorithms/LightCompensationFilter.h           |    65 -
 .../Algorithms/LightCompensationFilter.hxx         |    96 -
 lib/cpExtensions/Algorithms/MFluxMedialness.h      |    74 -
 lib/cpExtensions/Algorithms/MFluxMedialness.hxx    |   159 -
 lib/cpExtensions/Algorithms/MacheteImageFilter.h   |    72 -
 lib/cpExtensions/Algorithms/MacheteImageFilter.hxx |    92 -
 .../Algorithms/MultiScaleGaussianImageFilter.h     |    86 -
 .../Algorithms/MultiScaleGaussianImageFilter.hxx   |   226 -
 lib/cpExtensions/Algorithms/ParallelImageMean.h    |    70 -
 lib/cpExtensions/Algorithms/ParallelImageMean.hxx  |    65 -
 .../PolyLineParametricPathToSimple3DCurve.cxx      |    94 -
 .../PolyLineParametricPathToSimple3DCurve.h        |    65 -
 .../Algorithms/PolyLineParametricPathWriter.h      |    74 -
 .../Algorithms/PolyLineParametricPathWriter.hxx    |   160 -
 lib/cpExtensions/Algorithms/RGBExtractFunction.h   |    54 -
 .../Algorithms/RGBImageToOtherChannelsFilter.h     |    67 -
 .../Algorithms/RGBImageToOtherChannelsFilter.hxx   |    71 -
 lib/cpExtensions/Algorithms/RGBToHSVFunction.h     |    87 -
 .../Algorithms/RGBToSingleChannelFunctor.h         |    86 -
 .../Algorithms/RGBToSingleChannelFunctor.hxx       |   188 -
 lib/cpExtensions/Algorithms/RGBToYPbPrFunction.h   |    72 -
 lib/cpExtensions/Algorithms/RasterContourFilter.h  |   105 -
 .../Algorithms/RasterContourFilter.hxx             |   172 -
 .../Algorithms/RegionOfInterestImageCalculator.h   |    73 -
 .../Algorithms/RegionOfInterestImageCalculator.hxx |    92 -
 lib/cpExtensions/Algorithms/SkeletonReader.h       |    85 -
 lib/cpExtensions/Algorithms/SkeletonReader.hxx     |   176 -
 .../Algorithms/SkeletonToImageFilter.h             |    81 -
 .../Algorithms/SkeletonToImageFilter.hxx           |   119 -
 lib/cpExtensions/Algorithms/SkeletonWriter.h       |    69 -
 lib/cpExtensions/Algorithms/SkeletonWriter.hxx     |   159 -
 .../Algorithms/SpatialObjectMaskImageFilter.h      |    87 -
 .../Algorithms/SpatialObjectMaskImageFilter.hxx    |   136 -
 .../Algorithms/UnaryThresholdImageFilter.h         |   102 -
 .../Algorithms/UnaryThresholdImageFilter.hxx       |   245 -
 lib/cpExtensions/Config.h.in                       |    70 -
 lib/cpExtensions/DataStructures/Graph.h            |   166 -
 lib/cpExtensions/DataStructures/Graph.hxx          |   267 -
 .../DataStructures/PolyLineParametricPath.h        |   100 -
 .../DataStructures/PolyLineParametricPath.hxx      |   215 -
 lib/cpExtensions/DataStructures/Simple3DCurve.cxx  |   137 -
 lib/cpExtensions/DataStructures/Simple3DCurve.h    |    75 -
 lib/cpExtensions/DataStructures/Skeleton.h         |    62 -
 lib/cpExtensions/DataStructures/Skeleton.hxx       |    94 -
 lib/cpExtensions/Interaction/BaseStyle.cxx         |   437 -
 lib/cpExtensions/Interaction/BaseStyle.h           |   193 -
 .../Interaction/ImageSlicePointPlacer.cxx          |   275 -
 .../Interaction/ImageSlicePointPlacer.h            |    78 -
 lib/cpExtensions/Interaction/ImageSliceStyle.cxx   |   414 -
 lib/cpExtensions/Interaction/ImageSliceStyle.h     |    88 -
 lib/cpExtensions/Interaction/SeedWidget.cxx        |   165 -
 lib/cpExtensions/Interaction/SeedWidget.h          |    63 -
 lib/cpExtensions/QT/ActorsWidgetInterface.h        |    68 -
 lib/cpExtensions/QT/ConfigurationChooser.cxx       |    51 -
 lib/cpExtensions/QT/ConfigurationChooser.h         |    45 -
 lib/cpExtensions/QT/ConfigurationChooser.ui        |    51 -
 lib/cpExtensions/QT/ImageWidget.cxx                |   225 -
 lib/cpExtensions/QT/ImageWidget.h                  |    75 -
 lib/cpExtensions/QT/MPR3DWidget.cxx                |   140 -
 lib/cpExtensions/QT/MPR3DWidget.h                  |    64 -
 lib/cpExtensions/QT/MPRInteractionCommand.cxx      |    97 -
 lib/cpExtensions/QT/MPRInteractionCommand.h        |    58 -
 lib/cpExtensions/QT/RendererWidget.cxx             |   990 -
 lib/cpExtensions/QT/RendererWidget.h               |   138 -
 lib/cpExtensions/QT/SimpleMPRWidget.cxx            |   635 -
 lib/cpExtensions/QT/SimpleMPRWidget.h              |   135 -
 lib/cpExtensions/QT/SimpleMPRWidget.ui             |    48 -
 .../QT/WindowLevelImageConfiguration.cxx           |   231 -
 .../QT/WindowLevelImageConfiguration.h             |    56 -
 .../QT/WindowLevelImageConfiguration.ui            |   216 -
 lib/cpExtensions/Visualization/CursorActors.cxx    |   176 -
 lib/cpExtensions/Visualization/CursorActors.h      |    70 -
 lib/cpExtensions/Visualization/ImageActor.cxx      |    94 -
 lib/cpExtensions/Visualization/ImageActor.h        |    62 -
 .../ImageIndexesContainerToPolyData.h              |    71 -
 .../ImageIndexesContainerToPolyData.hxx            |   188 -
 .../Visualization/ImageOutlineActor.cxx            |    68 -
 lib/cpExtensions/Visualization/ImageOutlineActor.h |    59 -
 .../Visualization/ImageOutlineSource.cxx           |   156 -
 .../Visualization/ImageOutlineSource.h             |    53 -
 .../Visualization/ImageSliceActors.cxx             |   174 -
 lib/cpExtensions/Visualization/ImageSliceActors.h  |    74 -
 .../Visualization/ImageSliceMapper.cxx             |    64 -
 lib/cpExtensions/Visualization/ImageSliceMapper.h  |    43 -
 .../Visualization/ImageViewerActors.cxx            |   169 -
 lib/cpExtensions/Visualization/ImageViewerActors.h |    64 -
 lib/cpExtensions/Visualization/LUTImageActor.cxx   |   160 -
 lib/cpExtensions/Visualization/LUTImageActor.h     |    78 -
 lib/cpExtensions/Visualization/LineSource.cxx      |   119 -
 lib/cpExtensions/Visualization/LineSource.h        |    66 -
 lib/cpExtensions/Visualization/MPR3DActors.cxx     |   186 -
 lib/cpExtensions/Visualization/MPR3DActors.h       |    85 -
 lib/cpExtensions/Visualization/MeshActor.cxx       |    56 -
 lib/cpExtensions/Visualization/MeshActor.h         |    45 -
 lib/cpExtensions/Visualization/OutlineSource.cxx   |    50 -
 lib/cpExtensions/Visualization/OutlineSource.h     |    48 -
 .../PolyLineParametricPathToPolyData.cxx           |   131 -
 .../PolyLineParametricPathToPolyData.h             |    60 -
 .../Visualization/Simple3DCurveToPolyData.cxx      |   119 -
 .../Visualization/Simple3DCurveToPolyData.h        |    60 -
 .../Visualization/SkeletonToPolyData.cxx           |   147 -
 .../Visualization/SkeletonToPolyData.h             |    60 -
 .../Visualization/WindowLevelImageActor.cxx        |   200 -
 .../Visualization/WindowLevelImageActor.h          |    66 -
 lib/cpInstances/BaseObjects/ITKBaseObjects.i       |    41 -
 lib/cpInstances/BaseObjects/ITKBoundingBoxes.i     |     6 -
 lib/cpInstances/BaseObjects/ITKTransforms.i        |    18 -
 lib/cpInstances/CMakeLists.txt                     |    50 -
 lib/cpInstances/DataObjects/BoundingBox.cxx        |    93 -
 lib/cpInstances/DataObjects/BoundingBox.h          |   107 -
 lib/cpInstances/DataObjects/Image.cxx              |   196 -
 lib/cpInstances/DataObjects/Image.d                |    27 -
 lib/cpInstances/DataObjects/Image.h                |    71 -
 lib/cpInstances/DataObjects/Mesh.cxx               |   180 -
 lib/cpInstances/DataObjects/Mesh.d                 |     4 -
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 lib/cpInstances/DataObjects/Simple3DCurve.cxx      |    64 -
 lib/cpInstances/DataObjects/Simple3DCurve.d        |     1 -
 lib/cpInstances/DataObjects/Simple3DCurve.h        |    62 -
 lib/cpInstances/DataObjects/Skeleton.cxx           |    39 -
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 lib/cpInstances/Images/ITKImagesSimpleIterators.i  |    27 -
 lib/cpInstances/Images/itkImageToVTKImageFilter.h  |   111 -
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 lib/cpInstances/Images/itkVTKImageToImageFilter.h  |   100 -
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 lib/cpPlugins/Config.h.in                          |   169 +-
 lib/cpPlugins/DataObject.cxx                       |    56 +
 lib/cpPlugins/DataObject.h                         |    58 +
 lib/cpPlugins/Filter.cxx                           |   163 +
 lib/cpPlugins/Filter.h                             |   122 +
 lib/cpPlugins/Functor.cxx                          |    29 +
 lib/cpPlugins/Functor.h                            |    29 +
 lib/cpPlugins/Interface/Loader.cxx                 |   278 -
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 lib/cpPlugins/Interface/Workspace.cxx              |   638 -
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 lib/cpPlugins/Library.cxx                          |   126 +
 lib/cpPlugins/Library.h                            |    47 +
 lib/cpPlugins/Manager.cxx                          |   177 +
 lib/cpPlugins/Manager.h                            |    50 +
 lib/cpPlugins/OS/Chrono.h                          |    15 -
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 lib/cpPlugins/Object.cxx                           |    97 +
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 lib/cpPlugins/Parameters.cxx.d                     |   478 +
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 lib/cpPlugins/Pipeline.h                           |   150 +
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 lib/cpPlugins/tinyxml2/tinyxml2.cpp                |  2467 --
 lib/cpPlugins/tinyxml2/tinyxml2.h                  |  2106 --
 lib/cpPluginsBase/AppendRawDataFilter.cxx          |    57 +
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 lib/cpPluginsBase/Host.plg                         |    14 +
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 lib/mstch/mstch.cpp                                |    20 +
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 plugins/CMakeLists.txt                             |    59 -
 plugins/GenericPlugins/DataReproducer.cxx          |    49 -
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 create mode 100644 lib/cpPluginsBase/RawFileWriter.h
 create mode 100644 lib/cpPluginsBase/RotNRawDataFunctor.cxx
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 create mode 100644 lib/mstch/state/render_state.hpp
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 create mode 100644 lib/mstch/token.cpp
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 create mode 100644 lib/mstch/visitor/is_node_empty.hpp
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 delete mode 100644 plugins/ITKAnisotropicSmoothing/CurvatureAnisotropicDiffusionImageFilter.cxx
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 delete mode 100644 plugins/ITKDistanceMapFilters/SignedMaurerDistanceMapImageFilter.cxx
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 delete mode 100644 plugins/ITKFiniteDifference/ITKFiniteDifference.i
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 delete mode 100644 plugins/ITKIO/ImageReader.cxx
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 delete mode 100644 plugins/ITKImageGenericFilters_1/CastImageFilter.cxx
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 delete mode 100644 plugins/ITKImageGenericFilters_1/ITKImageGenericFilters_1.i
 delete mode 100644 plugins/ITKImageGenericFilters_1/ImageToBoundingBoxFromThreshold.cxx
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 delete mode 100644 plugins/ITKImageGenericFilters_1/MinimumMaximumImageCalculator.cxx
 delete mode 100644 plugins/ITKImageGenericFilters_1/MinimumMaximumImageCalculator.h
 delete mode 100644 plugins/ITKImageGenericFilters_1/RegionOfInterestImageFilter.cxx
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 delete mode 100644 plugins/ITKLevelSetFilters/ITKLevelSetFilters.i
 delete mode 100644 plugins/ITKLevelSetFilters/LaplacianSegmentationLevelSetImageFilter.cxx
 delete mode 100644 plugins/ITKLevelSetFilters/LaplacianSegmentationLevelSetImageFilter.h
 delete mode 100644 plugins/ITKLevelSetFilters/ThresholdSegmentationLevelSetImageFilter.cxx
 delete mode 100644 plugins/ITKLevelSetFilters/ThresholdSegmentationLevelSetImageFilter.h
 delete mode 100644 plugins/ITKMorphology/ITKMorphology.i
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 delete mode 100644 plugins/ITKParaMorphology/BinaryDilateParaImageFilter.cxx
 delete mode 100644 plugins/ITKParaMorphology/BinaryDilateParaImageFilter.h
 delete mode 100644 plugins/ITKParaMorphology/BinaryErodeParaImageFilter.cxx
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 delete mode 100644 plugins/ITKParaMorphology/ITKParaMorphology.i
 delete mode 100644 plugins/ITKRasterFilters/ITKRasterFilters.i
 delete mode 100644 plugins/ITKRasterFilters/RasterImageFilter.cxx
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 delete mode 100644 plugins/ITKSeparableFilters/ITKSeparableFilters.i
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 delete mode 100644 plugins/ITKSliceFilters/IsoResampleImageFilter.cxx
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 delete mode 100644 plugins/ITKUnaryFunctorFilters/AbsImageFilter.cxx
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 delete mode 100644 plugins/ITKUnaryFunctorFilters/InvertIntensityImageFilter.cxx
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 delete mode 100644 plugins/ITKUnaryFunctorFilters/UnaryBooleanImageFilter.cxx
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 delete mode 100644 plugins/ITKUnaryFunctorFilters/UnaryThresholdImageFilter.cxx
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 delete mode 100644 plugins/VTKFilters/CylinderSource.cxx
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 delete mode 100644 plugins/VTKFilters/MarchingCubes.cxx
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 delete mode 100644 plugins/VTKIO/MeshReader.cxx
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 delete mode 100644 plugins/cpExtensions/PolyLineParametricPathToPolyData.cxx
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 delete mode 100644 plugins/cpExtensions/PolyLineParametricPathToSimple3DCurve.cxx
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 delete mode 100644 plugins/cpExtensions/PolyLineParametricPathWriter.cxx
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 delete mode 100644 plugins/cpExtensions/SkeletonReader.cxx
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 delete mode 100644 plugins/cpExtensions/SkeletonToImageFilter.cxx
 delete mode 100644 plugins/cpExtensions/SkeletonToImageFilter.h
 delete mode 100644 plugins/cpExtensions/SkeletonWriter.cxx
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 delete mode 100644 tools/PrintDirInfo.cxx
 delete mode 100644 tools/PrintFileInfo.cxx
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hooks/post-receive
-- 
Plugin system to encapsulate pipeline objects (data, filters, sources and sinks)


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