[pubgit-commits-list] FrontAlgorithms branch sandbox updated. b69a5d04d117c1fdd297999c4fb034db54911aca

Mon Aug 28 23:01:35 CEST 2017

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The branch, sandbox has been updated
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- Log -----------------------------------------------------------------
http://git.creatis.insa-lyon.fr/pubgit/?p=FrontAlgorithms.git;a=commitdiff;h=b69a5d04d117c1fdd297999c4fb034db54911aca
commit b69a5d04d117c1fdd297999c4fb034db54911aca
Author: Leonardo FlÃ³rez-Valencia <florez-l at javeriana.edu.co>
Date:   Mon Aug 28 16:00:49 2017 -0500

    ...

http://git.creatis.insa-lyon.fr/pubgit/?p=FrontAlgorithms.git;a=commitdiff;h=594f8102342948c80175e6829e0134df63245106
commit 594f8102342948c80175e6829e0134df63245106
Author: Leonardo FlÃ³rez-Valencia <florez-l at javeriana.edu.co>
Date:   Mon Aug 28 15:47:44 2017 -0500

    ...

http://git.creatis.insa-lyon.fr/pubgit/?p=FrontAlgorithms.git;a=commitdiff;h=bd89a1af0c14ed2ac0afeca923103de54283cbaf
commit bd89a1af0c14ed2ac0afeca923103de54283cbaf
Author: Leonardo FlÃ³rez-Valencia <florez-l at javeriana.edu.co>
Date:   Mon Aug 28 15:46:40 2017 -0500

    ...

http://git.creatis.insa-lyon.fr/pubgit/?p=FrontAlgorithms.git;a=commitdiff;h=a8ac405fe1422bc0792a810f7f0693096a22c20e
commit a8ac405fe1422bc0792a810f7f0693096a22c20e
Author: Leonardo FlÃ³rez-Valencia <florez-l at javeriana.edu.co>
Date:   Mon Aug 28 15:44:34 2017 -0500

    ...

http://git.creatis.insa-lyon.fr/pubgit/?p=FrontAlgorithms.git;a=commitdiff;h=8abe87eaa0d29ba667d5cbf35f4ca1ca2e38c6c4
commit 8abe87eaa0d29ba667d5cbf35f4ca1ca2e38c6c4
Author: Leonardo FlÃ³rez-Valencia <florez-l at javeriana.edu.co>
Date:   Mon Aug 28 15:38:52 2017 -0500

    ...

-----------------------------------------------------------------------

Summary of changes:
 appli/CTBronchi/CMakeLists.txt                     |  40 ++--
 appli/CTBronchi/Functions.h                        |  57 ++++++
 appli/CTBronchi/Mori.h                             |  85 ++++++++
 docs/fpa.dia                                       | Bin 0 -> 3592 bytes
 lib/fpa/CMakeLists.txt                             |  32 ++-
 ...PolyLineParametricPathReader.h => PathReader.h} |  20 +-
 ...LineParametricPathReader.hxx => PathReader.hxx} |  29 ++-
 ...PolyLineParametricPathWriter.h => PathWriter.h} |  20 +-
 ...LineParametricPathWriter.hxx => PathWriter.hxx} |  22 +--
 lib/fpa/Config.h.in                                |  55 ++----
 lib/fpa/DataStructures/Graph.h                     |   2 -
 lib/fpa/DataStructures/Image/MinimumSpanningTree.h |  15 +-
 .../DataStructures/Image/MinimumSpanningTree.hxx   |  18 +-
 .../Image/{PolyLineParametricPath.h => Path.h}     |  20 +-
 .../Image/{PolyLineParametricPath.hxx => Path.hxx} |  45 +++--
 lib/fpa/DataStructures/Image/Skeleton.h            |   8 +-
 lib/fpa/DataStructures/MinimumSpanningTree.h       |   5 +-
 lib/fpa/DataStructures/MinimumSpanningTree.hxx     |  14 +-
 lib/fpa/Filters/Algorithm.h                        |  53 +++--
 lib/fpa/Filters/Algorithm.hxx                      |  71 +++++--
 lib/fpa/Filters/BaseMarksInterface.h               |  53 +++++
 lib/fpa/Filters/BaseSeedsInterface.h               |  53 +++++
 ...isionsInterface.h => CollisionMarksInterface.h} |  29 ++-
 ...nsInterface.hxx => CollisionMarksInterface.hxx} |  68 +++----
 lib/fpa/Filters/Dijkstra.h                         |  36 ++--
 lib/fpa/Filters/Dijkstra.hxx                       |  31 +--
 lib/fpa/Filters/DijkstraBase.h                     |  97 ---------
 lib/fpa/Filters/DijkstraBase.hxx                   | 129 ------------
 lib/fpa/Filters/Image/DefaultTraits.h              |  58 +++---
 lib/fpa/Filters/Image/Dijkstra.h                   |  27 +--
 lib/fpa/Filters/Image/Dijkstra.hxx                 |  23 ++-
 lib/fpa/Filters/Image/ExtractAxis.h                |   6 +-
 lib/fpa/Filters/Image/ExtractAxis.hxx              |   2 +-
 .../Image/{Skeleton.h => ExtractSkeleton.h}        |  22 +--
 .../Image/{Skeleton.hxx => ExtractSkeleton.hxx}    |  60 +++---
 lib/fpa/Filters/Image/{Algorithm.h => Interface.h} |  53 +++--
 .../Filters/Image/{Algorithm.hxx => Interface.hxx} |  77 ++++----
 lib/fpa/Filters/Image/LabelsSeedFilter.h           |  64 ------
 lib/fpa/Filters/Image/LabelsSeedInterface.h        |  54 -----
 lib/fpa/Filters/Image/Mori.h                       |  47 ++---
 lib/fpa/Filters/Image/Mori.hxx                     |  14 +-
 lib/fpa/Filters/Image/MoriTraits.h                 |  44 +++++
 lib/fpa/Filters/Image/RandomWalker.h               |  77 +++-----
 lib/fpa/Filters/Image/RandomWalker.hxx             | 106 +++++-----
 lib/fpa/Filters/Image/RandomWalkerTraits.h         |  48 +++++
 lib/fpa/Filters/Image/RegionGrow.h                 |  23 +--
 lib/fpa/Filters/Image/SeedsFromLabelsInterface.h   |  52 +++++
 ...SeedFilter.hxx => SeedsFromLabelsInterface.hxx} |  52 +++--
 lib/fpa/Filters/MarksInterface.h                   |  54 -----
 lib/fpa/Filters/MarksInterface.hxx                 |  64 ------
 lib/fpa/Filters/Mori.h                             |  53 ++---
 lib/fpa/Filters/Mori.hxx                           | 218 +++++++++------------
 lib/fpa/Filters/MultipleSeedsInterface.h           |  50 +++++
 ...edsInterface.hxx => MultipleSeedsInterface.hxx} |  58 +++---
 lib/fpa/Filters/PriorityQueueAlgorithm.h           |  71 +++++++
 lib/fpa/Filters/PriorityQueueAlgorithm.hxx         |  90 +++++++++
 lib/fpa/Filters/QueueAlgorithm.h                   |  63 ++++++
 lib/fpa/Filters/QueueAlgorithm.hxx                 |  74 +++++++
 lib/fpa/Filters/RandomWalker.h                     |  77 ++++++++
 lib/fpa/Filters/RandomWalker.hxx                   |  84 ++++++++
 lib/fpa/Filters/RegionGrow.h                       |  48 ++---
 lib/fpa/Filters/RegionGrow.hxx                     |  89 +++------
 lib/fpa/Filters/SeedsInterface.h                   |  55 ------
 lib/fpa/Filters/SingleSeedInterface.h              |  27 ++-
 lib/fpa/Filters/SingleSeedInterface.hxx            |  53 +++--
 lib/fpa/Functors/BaseVertexFunction.h              |  53 +----
 lib/fpa/Functors/Dijkstra/Image/Gaussian.h         |   8 +-
 lib/fpa/Functors/Dijkstra/Image/Identity.h         |   8 +-
 lib/fpa/Functors/RegionGrow/BinaryThreshold.h      |   1 -
 lib/fpa/Functors/VertexFunction.h                  |  59 ++++++
 ...thToPolyDataFilter.h => PathToPolyDataFilter.h} |  27 ++-
 ...PolyDataFilter.hxx => PathToPolyDataFilter.hxx} |  38 ++--
 tests/image/CMakeLists.txt                         |   2 +-
 tests/image/Dijkstra/CMakeLists.txt                |   2 +-
 tests/image/Dijkstra/ExtractAxis.cxx               |   4 +-
 .../Dijkstra/{Skeleton.cxx => ExtractSkeleton.cxx} |   4 +-
 tests/image/RandomWalker/Gaussian.cxx              |  35 ++--
 tests/image/RegionGrow/Tautology.cxx               |  13 +-
 tests/image/VTK/CMakeLists.txt                     |  21 --
 .../image/VTK/PolyLineParametricPathToPolyData.cxx |  54 -----
 tests/image/VTK/SkeletonToPolyData.cxx             |  54 -----
 81 files changed, 1856 insertions(+), 1771 deletions(-)
 create mode 100644 appli/CTBronchi/Functions.h
 create mode 100644 appli/CTBronchi/Mori.h
 create mode 100644 docs/fpa.dia
 rename lib/fpa/Common/Image/{PolyLineParametricPathReader.h => PathReader.h} (76%)
 rename lib/fpa/Common/Image/{PolyLineParametricPathReader.hxx => PathReader.hxx} (82%)
 rename lib/fpa/Common/Image/{PolyLineParametricPathWriter.h => PathWriter.h} (69%)
 rename lib/fpa/Common/Image/{PolyLineParametricPathWriter.hxx => PathWriter.hxx} (80%)
 rename lib/fpa/DataStructures/Image/{PolyLineParametricPath.h => Path.h} (84%)
 rename lib/fpa/DataStructures/Image/{PolyLineParametricPath.hxx => Path.hxx} (79%)
 create mode 100644 lib/fpa/Filters/BaseMarksInterface.h
 create mode 100644 lib/fpa/Filters/BaseSeedsInterface.h
 rename lib/fpa/Filters/{MarksWithCollisionsInterface.h => CollisionMarksInterface.h} (65%)
 rename lib/fpa/Filters/{MarksWithCollisionsInterface.hxx => CollisionMarksInterface.hxx} (79%)
 delete mode 100644 lib/fpa/Filters/DijkstraBase.h
 delete mode 100644 lib/fpa/Filters/DijkstraBase.hxx
 rename lib/fpa/Filters/Image/{Skeleton.h => ExtractSkeleton.h} (88%)
 rename lib/fpa/Filters/Image/{Skeleton.hxx => ExtractSkeleton.hxx} (83%)
 rename lib/fpa/Filters/Image/{Algorithm.h => Interface.h} (54%)
 rename lib/fpa/Filters/Image/{Algorithm.hxx => Interface.hxx} (64%)
 delete mode 100644 lib/fpa/Filters/Image/LabelsSeedFilter.h
 delete mode 100644 lib/fpa/Filters/Image/LabelsSeedInterface.h
 create mode 100644 lib/fpa/Filters/Image/MoriTraits.h
 create mode 100644 lib/fpa/Filters/Image/RandomWalkerTraits.h
 create mode 100644 lib/fpa/Filters/Image/SeedsFromLabelsInterface.h
 rename lib/fpa/Filters/Image/{LabelsSeedFilter.hxx => SeedsFromLabelsInterface.hxx} (52%)
 delete mode 100644 lib/fpa/Filters/MarksInterface.h
 delete mode 100644 lib/fpa/Filters/MarksInterface.hxx
 create mode 100644 lib/fpa/Filters/MultipleSeedsInterface.h
 rename lib/fpa/Filters/{SeedsInterface.hxx => MultipleSeedsInterface.hxx} (69%)
 create mode 100644 lib/fpa/Filters/PriorityQueueAlgorithm.h
 create mode 100644 lib/fpa/Filters/PriorityQueueAlgorithm.hxx
 create mode 100644 lib/fpa/Filters/QueueAlgorithm.h
 create mode 100644 lib/fpa/Filters/QueueAlgorithm.hxx
 create mode 100644 lib/fpa/Filters/RandomWalker.h
 create mode 100644 lib/fpa/Filters/RandomWalker.hxx
 delete mode 100644 lib/fpa/Filters/SeedsInterface.h
 create mode 100644 lib/fpa/Functors/VertexFunction.h
 rename lib/fpa/VTK/Image/{PolyLineParametricPathToPolyDataFilter.h => PathToPolyDataFilter.h} (59%)
 rename lib/fpa/VTK/Image/{PolyLineParametricPathToPolyDataFilter.hxx => PathToPolyDataFilter.hxx} (72%)
 rename tests/image/Dijkstra/{Skeleton.cxx => ExtractSkeleton.cxx} (95%)
 delete mode 100644 tests/image/VTK/CMakeLists.txt
 delete mode 100644 tests/image/VTK/PolyLineParametricPathToPolyData.cxx
 delete mode 100644 tests/image/VTK/SkeletonToPolyData.cxx

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Generic implementation of front propagation algorithms with some extra features