[Dcmlib] Fwd: [Gdcm2] Fwd: Re: Reading sequences
Eduardo - Yahoo
camargo_rh at yahoo.com.br
Mon Feb 1 13:00:47 CET 2010
Somebody can help me??
I don`t know what I can do to solve it.
---------- Forwarded message ----------
From: Tom Marynowski <lordglub at gmail.com>
Date: 2010/1/29
Subject: Re: [Gdcm2] Fwd: Re: Reading sequences
To: Eduardo - Yahoo <camargo_rh at yahoo.com.br>
Hello
as Mathieu say: you will have more chance with GDCM1 mailling list.
http://www.creatis.insa-lyon.fr/mailman/listinfo/dcmlib
Tom
2010/1/28 Eduardo - Yahoo <camargo_rh at yahoo.com.br>
I'd appreciate if anyone could help me in solve this trouble.
>
>
>
>
>
> ---------- Forwarded message ----------
> From: <eduardo.ecamargo at gmail.com>
> Date: 2010/1/28
> Subject: Re: Re: [Gdcm2] Reading sequences
> To: Eduardo - Yahoo <camargo_rh at yahoo.com.br>
> Cc: jpr at creatis.insa-lyon.fr, Mathieu Malaterre <
> mathieu.malaterre at gmail.com>
>
>
> Hi, Jean!
>
>
>
> Excuse my insistence but I wonder if could see my file. I'm trying to cast
> but I can not.
>
>
>
> thanks,
> Eduardo
>
>
>
> Em 27/01/2010 16:03, Eduardo - Yahoo <camargo_rh at yahoo.com.br> escreveu:
>
> > Hi,
> >
> > These two cast woks
> >
> > gdcm::DocEntry *d;
> >
> > gdcm::ContentEntry* valEntry = dynamic_castContentEntry *>(d);
> > gdcm::ValEntry* valEntry = dynamic_cast(d);
> >
> >
> >
> > but not this
> >
> > gdcm::BinEntry* binEntry = dynamic_cast(d);
>
> >
> >
> > If you have another idea....
> > You could look at the link you sent when you are on your computer?
> >
> >
> >
> > Sorry for my english and
> > Thanks for your help.
> >
> > Eduardo
> >
> >
> >
> >
> > 2010/1/27 jpr at creatis.insa-lyon.fr>
> >
> > Hi,
> >
> >
> >
> > The trouble comes from the fact that the values you want to acces are
> 'FD'
> >
> > value representation, that's not printable 'as is'.
> >
> >
> >
> > I see you're using gdcm1.2 (the one used by itk)
> >
> > The trouble is solved in a transparent way in gdcm1.3 (DON'T upgrade,
> >
> > since a lot of stuff was modified in the API)
> >
> >
> >
> > Try to use a 'BinEntry', instead of a 'ValEntry' and cast the result of
> >
> > GetBinArea() as a float*
> >
> >
> >
> > (I'm not on my PC, I cannot tell you much more, right now).
> >
> >
> >
> > HTH
> >
> >
> >
> > --
> >
> > Jean-Pierre Roux
> >
> > Creatis CNRS UMR 5220, INSERM U630
> >
> >
> >
> >
> >
> >
> > > Hi, Jean,
> >
> > >
> >
> > > Thanks for your help.
> >
> > > You could download a sample in this link
> >
> >
> > >
> http://hemo01a.lncc.br/~eduardo/ivushttp://hemo01a.lncc.br/%7Eeduardo/ivus<http://hemo01a.lncc.br/%7Eeduardo/ivushttp://hemo01a.lncc.br/%7Eeduardo/ivus>
> >(26
>
> >
> >
> >
> > > MB)
> >
> > >
> >
> > >
> >
> > >
> >
> > >
> >
> > >
> >
> > > 2010/1/27 jpr at creatis.insa-lyon.fr>
> >
> > >
> >
> > >> Hi, Eduardo,
> >
> > >>
> >
> > >> Could you send me a sample of your file, so I can try to find what's
> >
> > >> wrong
> >
> > >> with gdm 1.
> >
> > >>
> >
> > >> Jean-Pierre Roux
> >
> > >> (was developper of gdcm 1.x)
> >
> > >>
> >
> > >> Thx
> >
> > >>
> >
> > >> --
> >
> > >> Jean-Pierre Roux
> >
> > >> Creatis CNRS UMR 5220, INSERM U630
>
> >
> > >>
> >
> > >> > I am using this code below. What is wrong with tags 0018|602c and
> >
> > >> > 0018|602e?
> >
> > >> > When I use other program ( Sante DICOM Viewer FREE) for open the
> same
> >
> > >> file
> >
> > >> > these tags content 0.001752.
> >
> > >> >
> >
> > >> > I am using ITK 3.16 and gdcm 1.X.
> >
> > >> >
> >
> > >> >
> >
> > >> >
> >
> > >> > typedef gdcm::File DICOMFile* f1 = NULL;
> >
> > >> > f1 = (*this->GetFileList())[0];
> >
> > >> >
> >
> > >> >
> >
> > >> > gdcm::DocEntry *e = f1->GetDocEntry(0x0018,0x6011);
> >
> > >> > if ( !e )
> >
> > >> > {
> >
> > >> > std::cout
> > >> found"
> >
> > >> >
> > >> > }
> >
> > >> >
> >
> > >> > gdcm::SeqEntry *s = dynamic_cast(e);
> >
> > >> > if ( !s )
> >
> > >> > {
> >
> > >> > std::cout
> > >> >
> > >> > }
> >
> > >> >
> >
> > >> > gdcm::DocEntry *d;
> >
> > >> > gdcm::SQItem *tmpSI = s->GetFirstSQItem(); // For all the
> SQItems
> >
> > >> > std::string key;
> >
> > >> >
> >
> > >> > // cout GetNumberOfSQItems()
> > >> >
> >
> > >> > while(tmpSI)
> >
> > >> > {
> >
> > >> > d = tmpSI->GetFirstEntry();
> >
> > >> >
> >
> > >> > while(d)
> >
> > >> > {
> >
> > >> > gdcm::ContentEntry* valEntry = dynamic_castContentEntry
> >
> > >> > *>(d);
> >
> > >> >
> >
> > >> > key = d->GetKey();
> >
> > >> >
> >
> > >> > cout GetValue()
> > >> > cout GetName()
> > >> > cout GetVR()
> > >> > cout GetVM()
> > >> > cout GetLength()
> > >> > cout GetFullLength()
> >
> > >> >
> > >> > cout GetReadLength()
> >
> > >> >
> > >> > cout IsImplicitVR()
> >
> > >> >
> > >> > cout IsVRUnknown()
> >
> > >>
> > >> > cout
> > >> >
> >
> > >> >
> >
> > >> > if(key.compare("0018|602c") == 0)
> >
> > >> > {
> >
> > >> > valEntry->SetValue("1.1234556");
> >
> > >> > cout GetValue()
> > >> > cout GetName()
> > >> > cout GetVR()
> > >> > cout GetVM()
> > >> > cout GetLength()
> > >> > cout GetFullLength()
> >
> > >> >
> > >> > cout GetReadLength()
> >
> > >> >
> > >> > cout IsImplicitVR()
> >
> > >> >
> > >> > cout IsVRUnknown()
> >
> > >> >
> > >> > cout
> > >> > }
> >
> > >> >
> >
> > >> > d = tmpSI->GetNextEntry();
> >
> > >> > }
> >
> > >> >
> >
> > >> > tmpSI=s->GetNextSQItem();
> >
> > >> > }
> >
> > >> >
> >
> > >> >
> >
> > >> >
> >
> > >> > *
> >
> > >> > Output:*
> >
> > >> >
> >
> > >> >
> >
> > >> > 0018|6012 : 1
> >
> > >> > Name: Region Spatial Format
> >
> > >> > VR: US
> >
> > >> > VM: 1
> >
> > >> > Length: 2
> >
> > >> > FullLength: 10
> >
> > >> > ReadLength: 2
> >
> > >> > IsImplicitVR: 0
> >
> > >> > IsVRUnknown: 0
> >
> > >> >
> >
> > >> > 0018|6014 : 1
> >
> > >> > Name: Region Data Type
> >
> > >> > VR: US
> >
> > >> > VM: 1
> >
> > >> > Length: 2
> >
> > >> > FullLength: 10
> >
> > >> > ReadLength: 2
> >
> > >> > IsImplicitVR: 0
> >
> > >> > IsVRUnknown: 0
> >
> > >> >
> >
> > >> > 0018|6016 : 0
> >
> > >> > Name: Region Flags
> >
> > >> > VR: UL
> >
> > >> > VM: 1
> >
> > >> > Length: 4
> >
> > >> > FullLength: 12
> >
> > >> > ReadLength: 4
> >
> > >> > IsImplicitVR: 0
> >
> > >> > IsVRUnknown: 0
> >
> > >> >
> >
> > >> > 0018|6018 : 0
> >
> > >> > Name: Region Location Min X0
> >
> > >> > VR: UL
> >
> > >> > VM: 1
> >
> > >> > Length: 4
> >
> > >> > FullLength: 12
> >
> > >> > ReadLength: 4
> >
> > >> > IsImplicitVR: 0
> >
> > >> > IsVRUnknown: 0
> >
> > >> >
> >
> > >> > 0018|601a : 0
> >
> > >> > Name: Region Location Min Y0
> >
> > >> > VR: UL
> >
> > >> > VM: 1
> >
> > >> > Length: 4
> >
> > >> > FullLength: 12
> >
> > >> > ReadLength: 4
> >
> > >> > IsImplicitVR: 0
> >
> > >> > IsVRUnknown: 0
> >
> > >> >
> >
> > >> > 0018|601c : 511
> >
> > >> > Name: Region Location Max X1
> >
> > >> > VR: UL
> >
> > >> > VM: 1
> >
> > >> > Length: 4
> >
> > >> > FullLength: 12
> >
> > >> > ReadLength: 4
> >
> > >> > IsImplicitVR: 0
> >
> > >> > IsVRUnknown: 0
> >
> > >> >
> >
> > >> > 0018|601e : 511
> >
> > >> > Name: Region Location Max Y1
> >
> > >> > VR: UL
> >
> > >> > VM: 1
> >
> > >> > Length: 4
> >
> > >> > FullLength: 12
> >
> > >> > ReadLength: 4
> >
> > >> > IsImplicitVR: 0
> >
> > >> > IsVRUnknown: 0
> >
> > >> >
> >
> > >> > 0018|6024 : 3
> >
> > >> > Name: Physical Units X Direction
> >
> > >> > VR: US
> >
> > >> > VM: 1
> >
> > >> > Length: 2
> >
> > >> > FullLength: 10
> >
> > >> > ReadLength: 2
> >
> > >> > IsImplicitVR: 0
> >
> > >> > IsVRUnknown: 0
> >
> > >> >
> >
> > >> > 0018|6026 : 3
> >
> > >> > Name: Physical Units Y Direction
> >
> > >> > VR: US
> >
> > >> > VM: 1
> >
> > >> > Length: 2
> >
> > >> > FullLength: 10
> >
> > >> > ReadLength: 2
> >
> > >> > IsImplicitVR: 0
> >
> > >> > IsVRUnknown: 0
> >
> > >> >
> >
> > >> > 0018|602c :
> >
> > >> > Name: Physical Delta X
> >
> > >> > VR: FD
> >
> > >> > VM: 1
> >
> > >> > Length: 8
> >
> > >> > FullLength: 16
> >
> > >> > ReadLength: 8
> >
> > >> > IsImplicitVR: 0
> >
> > >> > IsVRUnknown: 0
> >
> > >> >
> >
> > >> > 0018|602c : 1.1234556
> >
> > >> > Name: Physical Delta X
> >
> > >> > VR: FD
> >
> > >> > VM: 1
> >
> > >> > Length: 10
> >
> > >> > FullLength: 16
> >
> > >> > ReadLength: 8
> >
> > >> > IsImplicitVR: 0
> >
> > >> > IsVRUnknown: 0
> >
> > >> >
> >
> > >> > 0018|602e :
> >
> > >> >
> >
> > >> >
> >
> > >> >
> >
> > >> >
> >
> > >> >
> >
> > >> >
> >
> > >> >
> >
> > >> >
> >
> > >> >
> >
> > >> >
> >
> > >> > 2010/1/25 Eduardo - Yahoo camargo_rh at yahoo.com.br>
> >
> > >> >>
> >
> > >> >> Ok, but where is the GDCM 1.x mailing list?
> >
> > >> >>
> >
> > >> >>
> >
> > >> >>
> >
> > >> >>
> >
> > >> >> 2010/1/25 Mathieu Malaterre mathieu.malaterre at gmail.com>
> >
> > >> >>>
> >
> > >> >>> I think you will have more chance on the GDCM 1.x mailing list
> (see
> >
> > >> >>> FAQ)
> >
> > >> >>>
> >
> > >> >>> HTH
> >
> > >> >>>
> >
> > >> >>> On Mon, Jan 25, 2010 at 5:06 PM, Eduardo - Yahoo
> >
> > >> >>> camargo_rh at yahoo.com.br> wrote:
> >
> > >> >>> > Hi,
> >
> > >> >>> >
> >
> > >> >>> > I have a set of Ultra sound files and I would like to read
> >
> > >> sequence
> >
> > >> > tags for
> >
> > >> >>> > to retrieve the pixelSpacing, for example. How will I do it?
> >
> > >> >>> > I am using ITK3.18 and gdcm 1.X.
> >
> > >> >>> >
> >
> > >> >>> >
> >
> > >> >>> > --
> >
> > >> >>> > Atenciosamente,
> >
> > >> >>> >
> >
> > >> >>> > Eduardo Camargo
> >
> > >> >>> > Analista de Sistemas
> >
> > >> >>> > HeMoLab - http://hemolab.lncc.br/equipe/desenv/eduardo.htm
> >
> > >> >>> > Laboratório Nacional de Computação Científica - LNCC
> >
> > >> >>> >
> >
> > >> >>> >
> >
> > >> >
> >
> > >>
> ------------------------------------------------------------------------------
> >
> > >> >>> > Throughout its 18-year history, RSA Conference consistently
> >
> > >> attracts
> >
> > >> > the
> >
> > >> >>> > world's best and brightest in the field, creating opportunities
> >
> > >> for
> >
> > >> >>> > Conference
> >
> > >> >>> > attendees to learn about information security's most important
> >
> > >> issues
> >
> > >> >>> > through
> >
> > >> >>> > interactions with peers, luminaries and emerging and established
> >
> > >> > companies.
> >
> > >> >>> > http://p.sf.net/sfu/rsaconf-dev2dev
> >
> > >> >>> > _______________________________________________
> >
> > >> >>> > Gdcm-developers mailing list
> >
> > >> >>> > Gdcm-developers at lists.sourceforge.net
> >
> > >> >>> > https://lists.sourceforge.net/lists/listinfo/gdcm-developers
> >
> > >> >>> >
> >
> > >> >>> >
> >
> > >> >>>
> >
> > >> >>>
> >
> > >> >>>
> >
> > >> >>> --
> >
> > >> >>> Mathieu
> >
> > >> >>
> >
> > >> >>
> >
> > >> >>
> >
> > >> >> --
> >
> > >> >> Atenciosamente,
> >
> > >> >>
> >
> > >> >> Eduardo Camargo
> >
> > >> >> Analista de Sistemas
> >
> > >> >> HeMoLab - http://hemolab.lncc.br/equipe/desenv/eduardo.htm
> >
> > >> >> Laboratório Nacional de Computação Científica - LNCC
> >
> > >> >
> >
> > >> >
> >
> > >> >
> >
> > >> > --
> >
> > >> > Atenciosamente,
> >
> > >> >
> >
> > >> > Eduardo Camargo
> >
> > >> > Analista de Sistemas
> >
> > >> > HeMoLab - http://hemolab.lncc.br/equipe/desenv/eduardo.htm
> >
> > >> > Laboratório Nacional de Computação Científica - LNCC
> >
> > >> >
> >
> > >>
> ------------------------------------------------------------------------------
> >
> > >> > The Planet: dedicated and managed hosting, cloud storage, colocation
> >
> > >> > Stay online with enterprise data centers and the best network in the
> >
> > >> > business
> >
> > >> > Choose flexible plans and management services without long-term
> >
> > >> contracts
> >
> > >> > Personal 24x7 support from experience hosting pros just a phone call
> >
> > >> away.
> >
> > >> >
> >
> > >>
> http://p.sf.net/sfu/theplanet-com_______________________________________________
>
> >
> > >> > Gdcm-developers mailing list
> >
> > >> > Gdcm-developers at lists.sourceforge.net
> >
> > >> > https://lists.sourceforge.net/lists/listinfo/gdcm-developers
> >
> > >> >
> >
> > >>
> >
> > >>
> >
> > >
> >
> > >
> >
> > > --
> >
> > > Atenciosamente,
> >
> > >
> >
> > > Eduardo Camargo
> >
> > > Analista de Sistemas
> >
> > > HeMoLab - http://hemolab.lncc.br/equipe/desenv/eduardo.htm
> >
> > > Laboratório Nacional de Computação Científica - LNCC
> >
> > >
> >
> >
> >
> >
> >
> >
> >
> >
> > --
> > Atenciosamente,
> >
> > Eduardo Camargo
> > Analista de Sistemas
> > HeMoLab - http://hemolab.lncc.br/equipe/desenv/eduardo.htm
> >
> > Laboratório Nacional de Computação Científica - LNCC
> >
>
>
>
> --
> Atenciosamente,
>
> Eduardo Camargo
> Analista de Sistemas
> HeMoLab - http://hemolab.lncc.br/equipe/desenv/eduardo.htm
> Laboratório Nacional de Computação Científica - LNCC
>
>
> ------------------------------------------------------------------------------
> The Planet: dedicated and managed hosting, cloud storage, colocation
> Stay online with enterprise data centers and the best network in the
> business
> Choose flexible plans and management services without long-term contracts
> Personal 24x7 support from experience hosting pros just a phone call away.
> http://p.sf.net/sfu/theplanet-com
> _______________________________________________
> Gdcm-developers mailing list
> Gdcm-developers at lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/gdcm-developers
>
>
--
Atenciosamente,
Eduardo Camargo
Analista de Sistemas
HeMoLab - http://hemolab.lncc.br/equipe/desenv/eduardo.htm
Laboratório Nacional de Computação Científica - LNCC
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