[Dcmlib] Re: AW: WG: Re2: Dicom2 error message

Mathieu Malaterre mathieu.malaterre at kitware.com
Tue Apr 18 16:15:29 CEST 2006


Walter,

	Every single file is passing fine with gdcm 1.2 (and CVS). Now the 
problem is that we don't have a fancy dicom2 in gdcm. What exactly are 
you trying to do ? Depending on your goal this might require a few 
coding from you.

Mathieu


Wellauer Walter wrote:
> Hi Mathieu,
> 
> Thanks for your reply. The problematic files are from a Siemens Acuson Sequoia 512, but I experience the same problems with files from a Elegra G50 (which is a much older system). Attached I send you copies of some example files (*MAG* from Sequoia, exp*.dcm from Elegra)
> 
> Walter
> 
> -----Ursprüngliche Nachricht-----
> Von: Mathieu Malaterre [mailto:mathieu.malaterre at kitware.com] 
> Gesendet: Montag, 17. April 2006 15:59
> An: Wellauer Walter
> Betreff: Re: WG: Re2: Dicom2 error message
> 
> Hi Walter,
> 
> 	I am part of the GDCM team. Is your DICOM file from a a Siemens Leonardo workstation ? If so I believe we have a patch to handle those problematic files (broken value length in some private tags).
> 	Feel free to send your question to the gdcm ML, which is at:
> 
> http://www.creatis.insa-lyon.fr/Public/Gdcm/MailingList.html
> 
> 	Or send me a copy of this file, so that I can examine.
> 
> --
> Mathieu
> 
> Sebastien BARRE wrote:
> 
>>At 4/11/2006 10:25 AM, you wrote:
>>
>>
>>>Bonjour M. Barre,
>>> 
>>>with dicom2 I can't handle any DICOM file originated from a Siemens 
>>>System (nor Siemens Acuson Sequoia nor Siemens Elegra e.g.); do you 
>>>plan to adapt dicom2 to recognize those formats in the near future?
>>
>>
>>Hi Walter,
>>
>>Unlikely, I'm glad dicom2 is still very popular, but I had no time to 
>>upgrade it in a while. I can only recommend more up-to-date tools like 
>>GDCM for example ( http://www.creatis.insa-lyon.fr/Public/Gdcm/Main.html).
>>
>>
>>>(see the attached example files from a Acuson Sequoia 512, the same 
>>>ones  I sent you last week; DICOM files originated from GE or Philips 
>>>Systems work fine).
>>
>>
>>Sorry for the delay, I was on vacation last week.
>>
>>Thank you
>>
>>
>>> 
>>>Thank you for your kind reply
>>>Best Regards
>>>Walter Wellauer
>>>_______________________________________________
>>>*Walter Wellauer*
>>>Applikationsmanager Radiologie- & Bild_ Applikationen
>>>PHY4 B 8
>>>
>>>Zentrale Informatik Medizinische Spezialapplikationen ZIM 
>>>UniversitätsSpital Zürich Physikstr. 4
>>>CH-8091 Zürich
>>>Telefon 044 255 21 65
>>>mailto: <mailto:walter.wellauer at usz.ch> _ walter.wellauer at usz.ch_ 
>>><mailto:walter.wellauer at usz.ch> 
>>>_______________________________________________
>>>
>>>---------------------------------------------------------------------
>>>---
>>>*Von:* Wellauer Walter
>>>*Gesendet:* Dienstag, 4. April 2006 15:57
>>>*An:* 'Sebastien BARRE'
>>>*Betreff:* Re2: Dicom2 error message
>>>
>>>Now I have files attached producing those photometric type (YBR_FULL) 
>>>errors. Can you arrange your program to handle this kind of dicom files?
>>>---------------------------------------------------------------------
>>>---
>>>*Von:* Wellauer Walter
>>>*Gesendet:* Dienstag, 4. April 2006 14:29
>>>*An:* 'Sebastien BARRE'
>>>*Betreff:* AW: Dicom2 error message
>>>
>>>Bonjour,
>>> 
>>>I'm trying to get a dicom with test patient data (as the patients 
>>>name is directly on the image),  which is made with the same 
>>>settings. I'll send it as soon as I get it. In the meanwhile I'll 
>>>send you a test dicom from the same machine (Siemens Acuson Sequoia 
>>>512), which doesn't produce exactly the same error message, but which 
>>>I cannot mask neather.
>>> 
>>>Thanks a lot!
>>> 
>>>Walter Wellauer
>>>
>>>---------------------------------------------------------------------
>>>---
>>>*Von:* Sebastien BARRE [ mailto:sebastien.barre at kitware.com]
>>>*Gesendet:* Freitag, 31. März 2006 17:13
>>>*An:* Wellauer Walter
>>>*Betreff:* Re: Dicom2 error message
>>>
>>>Hello
>>>
>>>At 09:35 AM 3/31/2006, you wrote:
>>>
>>>
>>>>>dicom2 --mask=zero:acc-max.bmp --to=output -d EXAMS\*
>>>>
>>>>>>[W] [15:51:37]
>>>>
>>>>   ifbstream& sbmDicomDataElementSet::ReadFiltered( ifbstream&, 
>>>>const sbmDic...
>>>>   Skipped : 12 data elements (12 SQ/length = 0, 0 not found in 
>>>>dic.)
>>>>
>>>>>>[E] [15:51:37]
>>>>
>>>>   bool sbmMedicalFrame::UpdateFrom(const sbmDicomDataElementSet&, 
>>>>const UWORD)
>>>>   can not handle photometric interpretation YBR_FULL! (email me)
>>>
>>>
>>>I appreciate the feedback. The message is here because I had never 
>>>seen (and still haven't) a DICOM image using that specific 
>>>photometric type (YBR_FULL). Would you consider sending me a sample ?
>>>
>>>Thank you
>>>
> 
> 
> 
> 




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