Thanks for uploading but I now get the following message:<div><br></div><div><br></div><div><img src="cid:ii_13d1ce8163cbe1f5" alt="Inline images 1"><br><br><div class="gmail_quote"><br></div><div class="gmail_quote">Any ideas?</div>
<div class="gmail_quote"><br></div><div class="gmail_quote">All the best,</div><div class="gmail_quote"><br></div><div class="gmail_quote">BIlal</div><div class="gmail_quote"><br></div><div class="gmail_quote">On 27 February 2013 15:28, Vivien Delmon <span dir="ltr"><<a href="mailto:vivien.delmon@creatis.insa-lyon.fr" target="_blank">vivien.delmon@creatis.insa-lyon.fr</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div class="im">On 02/27/2013 03:22 PM, Bilal Tahir wrote:<br>
</div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div class="im">
Dear Vivien,<br>
<br>
I deleted the previous version of vv and after installing and adding the<br>
path, I got the following error:<br>
<br>
<br></div>
Inline images 1<br>
<br>
</blockquote>
<br>
libstatgrab is an optional dependency of VV. Since it is installed on my computer the nightly build use it.<br>
I just added an option to deactivate this optional dependency and updated the nightly build, you can download it again.<br>
<br>
Thank you for testing vv's nightly build and sorry for the inconveniences.<br>
<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div class="im">
Please note that vv was working fine before and it didn't give this<br>
error. Do you know how to solve it?<br>
<br>
Best wishes,<br>
<br>
Bilal<br>
<br>
On 27 February 2013 13:51, Vivien Delmon<br>
<<a href="mailto:vivien.delmon@creatis.insa-lyon.fr" target="_blank">vivien.delmon@creatis.insa-<u></u>lyon.fr</a><br></div><div class="im">
<mailto:<a href="mailto:vivien.delmon@creatis.insa-lyon.fr" target="_blank">vivien.delmon@creatis.<u></u>insa-lyon.fr</a>>> wrote:<br>
<br>
On 02/24/2013 12:09 PM, Simon Rit wrote:<br>
<br>
Dear Bilal,<br>
We are considering this for VV first but we will not support<br>
this for<br>
clitk tools. We are happy to provide clitk tools but users must<br>
try to<br>
solve their compilation issues.<br>
<br>
<br>
I just compiled the first vv nightly build (linux 64 bits) which is<br>
available here :<br></div>
<a href="http://www.creatis.insa-lyon." target="_blank">http://www.creatis.insa-lyon.</a>_<u></u>_fr/~delmon/vv_nightly/vv-__<u></u>20130227.sh <<a href="http://www.creatis.insa-lyon.fr/~delmon/vv_nightly/vv-20130227.sh" target="_blank">http://www.creatis.insa-lyon.<u></u>fr/~delmon/vv_nightly/vv-<u></u>20130227.sh</a>><div class="im">
<br>
<br>
By the way, compilation of clitk tools, if this is what you are<br>
interested in, should not require qt if you disable VV compilation<br>
(CLITK_BUILD_VV:BOOL=OFF).<br>
Simon<br>
<br>
On Sat, Feb 23, 2013 at 12:13 AM, Bilal Tahir<br>
<<a href="mailto:b.tahir@sheffield.ac.uk" target="_blank">b.tahir@sheffield.ac.uk</a> <mailto:<a href="mailto:b.tahir@sheffield.ac.uk" target="_blank">b.tahir@sheffield.ac.<u></u>uk</a>><br></div>
<mailto:<a href="mailto:b.tahir@sheffield.ac." target="_blank">b.tahir@sheffield.ac.</a>_<u></u>_uk<div class="im"><br>
<mailto:<a href="mailto:b.tahir@sheffield.ac.uk" target="_blank">b.tahir@sheffield.ac.<u></u>uk</a>>>> wrote:<br>
<br>
Can I make a request that the latest version of VV<br>
including CLITK<br>
with all options set to ON be made available as a<br>
precompiled .sh<br>
binary file? Slicer3D <a href="http://download.slicer.org/" target="_blank">http://download.slicer.org/</a> allows for a<br>
nightly download of the binary version of the latest version.<br>
<br>
This is due to my case where I have experienced many errors in<br>
trying to install the relevant programs until I finally get to<br>
install CLITK whereas the Oct 2012 precomiled binary .sh<br>
file worked<br>
fine on linux for me. However, CLITK was not included in<br>
that release.<br>
<br>
Best wishes,<br>
<br>
Bilal<br>
<br>
On 22 February 2013 22:58, Bilal Tahir<br>
<<a href="mailto:b.tahir@sheffield.ac.uk" target="_blank">b.tahir@sheffield.ac.uk</a> <mailto:<a href="mailto:b.tahir@sheffield.ac.uk" target="_blank">b.tahir@sheffield.ac.<u></u>uk</a>><br></div>
<mailto:<a href="mailto:b.tahir@sheffield.ac." target="_blank">b.tahir@sheffield.ac.</a>_<u></u>_uk<div class="im"><br>
<mailto:<a href="mailto:b.tahir@sheffield.ac.uk" target="_blank">b.tahir@sheffield.ac.<u></u>uk</a>>>> wrote:<br>
<br>
Dear All,<br>
<br>
I am trying to install CLITK by adding the relevant =ON<br>
options<br>
on the CMakeLists.txt file (attached edited version in this<br>
email) found in the following link<br></div>
<a href="https://git.creatis.insa-lyon." target="_blank">https://git.creatis.insa-lyon.</a><u></u>__fr/pubgit/?p=clitk.git;a=<u></u>blob;__f=superbuild/<u></u>CMakeLists.txt<div><div class="h5"><br>
<<a href="https://git.creatis.insa-lyon.fr/pubgit/?p=clitk.git;a=blob;f=superbuild/CMakeLists.txt" target="_blank">https://git.creatis.insa-<u></u>lyon.fr/pubgit/?p=clitk.git;a=<u></u>blob;f=superbuild/CMakeLists.<u></u>txt</a>><br>
<br>
I then run the following two commands:<br>
<br>
<br>
cmake superbuild-file-directory<br>
make<br>
<br>
However, after running 'make' it started installing the<br>
programs<br>
(ITK, QT and VTK) one after the other for several hours<br>
until it<br>
reached 60% of the last program 'VV' where it gave the<br>
following<br>
errors and stopped:<br>
<br>
collect2: ld returned 1 exit status<br>
make[5]: *** [bin/vv] Error 1<br>
make[4]: *** [vv/CMakeFiles/vv.dir/all] Error 2<br>
make[3]: *** [all] Error 2<br>
make[2]: *** [Stamp/VV/VV-build] Error 2<br>
make[1]: *** [CMakeFiles/VV.dir/all] Error 2<br>
make: *** [all] Error 2<br>
<br>
I've copied and posted some of the last few lines up<br>
till the<br>
point that the error came.<br>
<br>
The 'make' command created several folders in my home<br>
folder<br>
(/home/md1bat/) including 'Source' and 'Build'. It<br>
appears that<br>
ITK, QT and VTK (not VV) completed as you can see from<br>
the /home/md1bat/CMakeFiles/ folder.<br>
<br>
Inline images 1<br>
<br>
Within the 'Build' folder, each of the four programs,<br>
ITK, VTK,<br>
QT and VV have at least a bin and/or lib folder. This<br>
is not the<br>
case in the 'Source' folder. Therefore, I have added<br>
the paths<br>
of the respective bin and lib folders from the 'Build'<br>
folder<br>
(not Source) to my .bashrc file (attached in this email).<br>
However, none of the programs (including the completed<br>
ITK, QT<br>
and VTK) seem to work even if I want to check which<br>
version I<br>
have installed using the command e.g itk --version. I<br>
have now<br>
deleted the precompiled 'VV' Oct 2012 version which<br>
used to work<br>
with the command vv. However, the command vv now gives the<br>
output 'command not found'.<br>
<br>
I'm not sure if I have done the export path correctly on my<br>
.bashrc as I have referenced it to the 'Build' folder<br>
and not<br>
the 'Source' folder as there was no bin or lib folders<br>
within<br>
that. Furthermore, I have no idea why the errors occurred.<br>
<br>
Please let me know if you have any suggestions.<br>
<br>
Best wishes,<br>
<br>
Bilal Tahir,<br>
James Morrison Researcher in Radiotherapy Imaging,<br>
University of Sheffield/Weston Park Cancer Hospital<br>
</div></div></blockquote><div class="HOEnZb"><div class="h5">
<br>
-- <br>
Vivien Delmon<br>
PhD student at CREATIS, Lyon<br>
Supported by ANRT and ELEKTA<br>
<a href="http://www.creatis.insa-lyon.fr/rio" target="_blank">http://www.creatis.insa-lyon.<u></u>fr/rio</a><br></div></div><div class="HOEnZb"><div class="h5">
______________________________<u></u>_________________<br>
vv mailing list<br>
<a href="mailto:vv@creatis.insa-lyon.fr" target="_blank">vv@creatis.insa-lyon.fr</a><br>
<a href="http://www.creatis.insa-lyon.fr/mailman/listinfo/vv" target="_blank">http://www.creatis.insa-lyon.<u></u>fr/mailman/listinfo/vv</a><br>
</div></div></blockquote></div><br><br clear="all"><div><br></div>-- <br>Bilal Tahir,<div>James Morrison Researcher in Radiotherapy Imaging</div>
</div>