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<div class=Section1>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'><o:p> </o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Bonjour,<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'><o:p> </o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Les trois champs indiqués ont bien la
valeur précisée. Je me suis inspiré d’un code que Jean-Pierre Roux m’a
envoyé qui transformait un image monochrome 8 bits vers une image RGB 3*8 bits
ainsi que une image 16 bits monochrome vers une image 3*16 bits RGB et j’ai
effectué la conversion selon ses conseils (d’ailleurs j obtiens un bon
résultat visible si je laisse le champ 16 bits allocated, mais l image est
beaucoup plus foncée que l’originale). Le else du code suivant correspond
au cas ou l’on aurait une image avec 16bits allocated : (L’image
sortante de ce code n est pas lisible car </span></font><font size=2
face=Arial><span style='font-size:10.0pt;font-family:Arial'>Offset + image size
> file length)<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'><o:p> </o:p></span></font></p>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>Merci,<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'> Olivier Stern<font color=navy><span style='color:navy'><o:p></o:p></span></font></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'><o:p> </o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>[…]<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'><o:p> </o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> gdcm::FileHelper *fh = <font
color=blue><span style='color:blue'>new</span></font> gdcm::FileHelper(
filename );<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> size_t dataSize =
fh->GetImageDataSize();<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> uint8_t *imageData =
fh->GetImageData();<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 face="Courier New"><span style='font-size:10.0pt;
font-family:"Courier New"'> uint8_t *imageDataRGB = <font color=blue><span
style='color:blue'>new</span></font> uint8_t[dataSize*3];<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 face="Courier New"><span style='font-size:10.0pt;
font-family:"Courier New"'><o:p> </o:p></span></font></p>
<p class=MsoNormal><font size=2 face="Courier New"><span style='font-size:10.0pt;
font-family:"Courier New"'>[…]</span></font><font size=2 color=navy
face=Arial><span style='font-size:10.0pt;font-family:Arial;color:navy'><o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'><o:p> </o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 color=blue
face="Courier New"><span style='font-size:10.0pt;font-family:"Courier New";
color:blue'> else</span></font><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> {<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <font color=green><span
style='color:green'>//fh->GetFile()->InsertValEntry( "8",
0x0028, 0x0100); // Bits Allocated<o:p></o:p></span></font></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <font color=green><span
style='color:green'>//fh->GetFile()->InsertValEntry( "8",
0x0028, 0x0101); // Bits Stored<o:p></o:p></span></font></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <font color=green><span
style='color:green'>//fh->GetFile()->InsertValEntry( "7",
0x0028, 0x0102); // High Bit<o:p></o:p></span></font></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <font color=green><span
style='color:green'>//fh->GetFile()->InsertValEntry( "0",
0x0028, 0x0103); // Pixel Representation<o:p></o:p></span></font></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> uint16_t maxVal = 0;<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> uint16_t minVal = 1000;<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <font color=blue><span
style='color:blue'>int</span></font> xSize = fh->GetFile()->GetXSize();<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <font color=blue><span
style='color:blue'>int</span></font> ySize = fh->GetFile()->GetYSize();<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 color=green
face="Courier New"><span style='font-size:10.0pt;font-family:"Courier New";
color:green'> // Recherche du pixel à la valeur maximale et minimale<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <font color=blue><span
style='color:blue'>for</span></font> (<font color=blue><span style='color:blue'>unsigned</span></font>
<font color=blue><span style='color:blue'>int</span></font>
i=0;i<dataSize/2;i++) {<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <font color=blue><span
style='color:blue'>if</span></font> (((uint16_t *)imageData)[i] > maxVal) {<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> maxVal = ((uint16_t
*)imageData)[i];<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> }<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <font color=blue><span
style='color:blue'>if</span></font> (((uint16_t *)imageData)[i] < minVal) {<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> minVal = ((uint16_t
*)imageData)[i];<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> }<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> }<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <font color=blue><span
style='color:blue'>for</span></font> (<font color=blue><span style='color:blue'>unsigned</span></font>
<font color=blue><span style='color:blue'>int</span></font>
i=0;i<dataSize/2;i++) {<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> uint16_t pixel =
(((uint16_t *)imageData)[i<st1:PersonName ProductID="] - maxVal" w:st="on">] -
maxVal</st1:PersonName>) * 255 / (maxVal - minVal);<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> imageDataRGB[i*3] =
imageDataRGB[i*3+1] = imageDataRGB[i*3+2] = ((uint8_t) pixel);<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 face="Courier New"><span style='font-size:10.0pt;
font-family:"Courier New"'> }<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 face="Courier New"><span style='font-size:10.0pt;
font-family:"Courier New"'> }<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <font color=green><span
style='color:green'>// Samples Per Pixel <o:p></o:p></span></font></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'>
fh->GetFile()->InsertValEntry( <font color=maroon><span style='color:
maroon'>"3 "</span></font> ,0x0028,0x0002);<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'>
fh->GetFile()->InsertValEntry( <font color=maroon><span style='color:
maroon'>"RGB "</span></font>,0x0028,0x0004 ); <font color=green><span
style='color:green'>// Photometric Interpretation<o:p></o:p></span></font></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'>
fh->GetFile()->InsertValEntry( <font color=maroon><span style='color:
maroon'>"1 "</span></font>,0x0028,0x0006 ); <font color=green><span
style='color:green'>// Planar Configuration<o:p></o:p></span></font></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> <o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 face="Courier New"><span style='font-size:10.0pt;
font-family:"Courier New"'> <font color=green><span style='color:green'>//
TODO : free existing PixelData first !</span></font><o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 color=navy
face=Arial><span style='font-size:10.0pt;font-family:Arial;color:navy'> </span></font><font
size=2 face="Courier New"><span style='font-size:10.0pt;font-family:"Courier New"'>fh->SetImageData(imageDataRGB,
dataSize*3); <o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> h->WriteDcmExplVR(
output );<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> /<font color=green><span
style='color:green'>/ fh->GetFile()->Print();<o:p></o:p></span></font></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> gdcm::FileHelper *fh2 =
new gdcm::FileHelper( output );<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> fh2->GetFile()->InsertValEntry(
"8", 0x0028, 0x0100); // Bits Allocated <o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> fh2->GetFile()->InsertValEntry(
"8", 0x0028, 0x0101); // Bits Stored<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> fh2->GetFile()->InsertValEntry(
"7", 0x0028, 0x0102); // High Bit<o:p></o:p></span></font></p>
<p class=MsoNormal style='text-autospace:none'><font size=2 face="Courier New"><span
style='font-size:10.0pt;font-family:"Courier New"'> fh2->GetFile()->InsertValEntry(
"0", 0x0028, 0x0103); // Pixel Representation<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 face="Courier New"><span style='font-size:10.0pt;
font-family:"Courier New"'> fh2->WriteDcmExplVR( output );<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 face="Courier New"><span style='font-size:10.0pt;
font-family:"Courier New"'><o:p> </o:p></span></font></p>
<p class=MsoNormal><font size=2 face="Courier New"><span style='font-size:10.0pt;
font-family:"Courier New"'> return 0 ;<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 face="Courier New"><span style='font-size:10.0pt;
font-family:"Courier New"'>}</span></font><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'><o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'><o:p> </o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'><o:p> </o:p></span></font></p>
<div>
<div class=MsoNormal align=center style='text-align:center'><font size=3
face="Times New Roman"><span style='font-size:12.0pt'>
<hr size=2 width="100%" align=center tabindex=-1>
</span></font></div>
<p class=MsoNormal><b><font size=2 face=Tahoma><span style='font-size:10.0pt;
font-family:Tahoma;font-weight:bold'>De :</span></font></b><font size=2
face=Tahoma><span style='font-size:10.0pt;font-family:Tahoma'> Benoit Regrain
[mailto:benoit.regrain@creatis.insa-lyon.fr] <br>
<b><span style='font-weight:bold'>Envoyé :</span></b> lundi 16 mai 2005
11:31<br>
<b><span style='font-weight:bold'>À :</span></b> <st1:PersonName
ProductID="Olivier Stern" w:st="on">Olivier Stern</st1:PersonName>; <st1:PersonName
w:st="on">Dcmlib@creatis.insa-lyon.fr</st1:PersonName>; 'Jean-Pierre Roux';
'Mathieu Malaterre'<br>
<b><span style='font-weight:bold'>Objet :</span></b> Re: [Dcmlib] offset</span></font><o:p></o:p></p>
</div>
<p class=MsoNormal><font size=3 face="Times New Roman"><span style='font-size:
12.0pt'><o:p> </o:p></span></font></p>
<div>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>Peut-on voir les codes que tu as écrit ?</span></font><o:p></o:p></p>
</div>
<div>
<p class=MsoNormal><font size=3 face="Times New Roman"><span style='font-size:
12.0pt'> <o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>Lorsque tu veux modifier le taux d'échantillonage de ton
image, tu as 3</span></font><o:p></o:p></p>
</div>
<div>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>champs à modifier : </span></font><o:p></o:p></p>
</div>
<div>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'> 0x0028,0x0100 <font color=green><span
style='color:green'>// Bits Allocted (= 8 dans ton cas)</span></font></span></font><o:p></o:p></p>
</div>
<div>
<p class=MsoNormal><font size=2 color=green face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:green'> 0x0028,0x0101); // Bits
Stored (= 8 dans ton cas)</span></font><o:p></o:p></p>
</div>
<div>
<p class=MsoNormal><font size=2 color=green face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:green'> </span></font><font size=2
face=Arial><span style='font-size:10.0pt;font-family:Arial'>0x0028,0x0102); <font
color=green><span style='color:green'>// High Bit (= 7 dans ton cas)<o:p></o:p></span></font></span></font></p>
</div>
<div>
<p class=MsoNormal><font size=3 face="Times New Roman"><span style='font-size:
12.0pt'> <o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>Si ces trois champs ne sont pas cohérents entre eux, il se
peux que </span></font><o:p></o:p></p>
</div>
<div>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>l'écriture ne se fasse pas ou que la lecture de l'image soit
incorrecte.</span></font><o:p></o:p></p>
</div>
<div>
<p class=MsoNormal><font size=3 face="Times New Roman"><span style='font-size:
12.0pt'> <o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>Cordialement<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>Benoit<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'> <o:p></o:p></span></font></p>
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<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'> <o:p></o:p></span></font></p>
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<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>REMARQUE</span></font><o:p></o:p></p>
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<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>--> aux développeurs... je ne suis pas sur qu'on ait
mis des tests</span></font><o:p></o:p></p>
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<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>sur ce point la. JPR, tu pourrais vérifier ca et peut-etre
meme les ajouter.</span></font><o:p></o:p></p>
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<p class=MsoNormal><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>Surtout à l'écriture.</span></font><o:p></o:p></p>
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<p class=MsoNormal><font size=3 face="Times New Roman"><span style='font-size:
12.0pt'> <font color=navy><span style='color:navy'><o:p></o:p></span></font></span></font></p>
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